RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	KRTAP20-2	Q3LI61	65 aa		1.03	□□□□□ -2.24
VPS8-223	ENST00000485024	SPINK9	Q5DT21	86 aa		1.03	□□□□□ -2.24
VPS8-223	ENST00000485024	LSM2	Q9Y333	95 aa	Known RBP	1.03	□□□□□ -2.24
VPS8-223	ENST00000485024	WFDC2	Q14508	124 aa		1.02	□□□□□ -2.25
VPS8-223	ENST00000485024	FXYD3	Q14802	87 aa		1.02	□□□□□ -2.25
VPS8-223	ENST00000485024	IQCJ	Q1A5X6	159 aa		1.02	□□□□□ -2.25
VPS8-223	ENST00000485024	CCDC58	Q4VC31	144 aa		1.02	□□□□□ -2.25
VPS8-223	ENST00000485024	TPT1P8	Q9HAU6	139 aa		1.02	□□□□□ -2.25
VPS8-223	ENST00000485024	PVALEF	A0A1B0GWK0	134 aa		1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	IQCF6	A8MYZ5	107 aa		1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	PHGR1	C9JFL3	82 aa		1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	LINC00694	P0DN24	101 aa		1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	COPZ1	P61923	177 aa		1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	SARNP	P82979	210 aa	Known RBP	1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	OR2T2	Q6IF00	324 aa		1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	GAFA1	Q96PS6	74 aa		1.01	□□□□□ -2.25
VPS8-223	ENST00000485024	LOC101927531	A0A1B0GV80	90 aa		1	□□□□□ -2.25
VPS8-223	ENST00000485024	GUCA1A	P43080	201 aa	Predicted RBP	1	□□□□□ -2.25
VPS8-223	ENST00000485024	RRAS2	P62070	204 aa	Predicted RBP	1	□□□□□ -2.25
VPS8-223	ENST00000485024	RPS25	P62851	125 aa	Known RBP	1	□□□□□ -2.25
VPS8-223	ENST00000485024	KLKP1	Q107X0	134 aa		1	□□□□□ -2.25
VPS8-223	ENST00000485024	VSTM2A	Q8TAG5	236 aa		1	□□□□□ -2.25
VPS8-223	ENST00000485024	USMG5	Q96IX5	58 aa		1	□□□□□ -2.25
VPS8-223	ENST00000485024	TSC22D3	Q99576	134 aa		1	□□□□□ -2.25
VPS8-223	ENST00000485024	PSMG3	Q9BT73	122 aa	Predicted RBP	1	□□□□□ -2.25
VPS8-223	ENST00000485024	COA4	Q9NYJ1	87 aa		1	□□□□□ -2.25
VPS8-223	ENST00000485024	TRAV12-2	A0A075B6T6	113 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	FAM236A	A0A1B0GUQ0	79 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	FAM236B	A0A1B0GV22	79 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024		H3BUA1	57 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	DEFB130B	P0DP73	79 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	DEFB130A	P0DP74	79 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	SPANXN1	Q5VSR9	72 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	LINC01545	Q5VT33	79 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	NCBP2-AS2	Q69YL0	99 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	TMEM191A	Q9H0A3	160 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	CCDC167	Q9P0B6	97 aa		0.99	□□□□□ -2.25
VPS8-223	ENST00000485024	MCRIP1	C9JLW8	97 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	ZNF670-ZNF695	F2Z2N8	137 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	FXYD1	O00168	92 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	PYY	P10082	97 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	ZNF56	Q15929	161 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	SLC48A1	Q6P1K1	146 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	PLAC4	Q8WY50	150 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	LINC00208	Q96KT6	92 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	BET1L	Q9NYM9	111 aa		0.98	□□□□□ -2.25
VPS8-223	ENST00000485024	TCRBV3S1	A0A5B6	114 aa		0.97	□□□□□ -2.25
VPS8-223	ENST00000485024		A0A096LPF7	62 aa		0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	SLC25A6	P12236	298 aa		0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	PIP	P12273	146 aa	Predicted RBP	0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	ZNF137P	P52743	207 aa		0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	CYP2G1P	Q6ZSU1	146 aa		0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	KCNRG	Q8N5I3	272 aa		0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	COPS9	Q8WXC6	57 aa		0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	TMEM141	Q96I45	108 aa		0.96	□□□□□ -2.26
VPS8-223	ENST00000485024	C20orf202	A1L168	122 aa		0.95	□□□□□ -2.26
VPS8-223	ENST00000485024		A6NIN4	97 aa		0.95	□□□□□ -2.26
VPS8-223	ENST00000485024	SELENOW	P63302	87 aa		0.95	□□□□□ -2.26
VPS8-223	ENST00000485024		Q6ZUT4	128 aa		0.95	□□□□□ -2.26
VPS8-223	ENST00000485024	DSCR8	Q96T75	97 aa		0.95	□□□□□ -2.26
VPS8-223	ENST00000485024	FAM107B	Q9H098	131 aa		0.95	□□□□□ -2.26
VPS8-223	ENST00000485024	SYNE1	Q8NF91	8797 aa	Known RBP	0.94	□□□□□ -2.26
VPS8-223	ENST00000485024	EDDM3B	P56851	147 aa		0.94	□□□□□ -2.26
VPS8-223	ENST00000485024	DEFB131A	P59861	70 aa		0.94	□□□□□ -2.26
VPS8-223	ENST00000485024	RPL7L1	Q6DKI1	246 aa	Known RBP	0.94	□□□□□ -2.26
VPS8-223	ENST00000485024	C1orf54	Q8WWF1	131 aa		0.94	□□□□□ -2.26
VPS8-223	ENST00000485024	LINC00312	Q9Y6C7	94 aa		0.94	□□□□□ -2.26
VPS8-223	ENST00000485024	RBAKDN	A6NC62	111 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	TMEM14DP	A8MWL7	114 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	RPL37	P61927	97 aa	Known RBP	0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	MIC13	Q5XKP0	118 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	HEPN1	Q6WQI6	88 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	WFDC10B	Q8IUB3	73 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	TSKU	Q8WUA8	353 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	ARL11	Q969Q4	196 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	IFI27L1	Q96BM0	104 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	NDUFA12	Q9UI09	145 aa		0.93	□□□□□ -2.26
VPS8-223	ENST00000485024	PIGBOS1	A0A0B4J2F0	54 aa		0.92	□□□□□ -2.26
VPS8-223	ENST00000485024	SSBP1	Q04837	148 aa	Known RBP	0.92	□□□□□ -2.26
VPS8-223	ENST00000485024	LINC01556	Q5JQF7	62 aa		0.92	□□□□□ -2.26
VPS8-223	ENST00000485024	FAM74A4	Q5TZK3	123 aa		0.92	□□□□□ -2.26
VPS8-223	ENST00000485024	SPTSSA	Q969W0	71 aa		0.92	□□□□□ -2.26
VPS8-223	ENST00000485024	TMEM242	Q9NWH2	141 aa		0.92	□□□□□ -2.26
VPS8-223	ENST00000485024	FAM223B	A6NKX1	122 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024		M0R129	80 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	NDUFB6	O95139	128 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	IL5	P05113	134 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	IFI6	P09912	130 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	SPATA8	Q6RVD6	105 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	RPS27L	Q71UM5	84 aa	Known RBP	0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	FAM223A	Q8IWN6	122 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	RPRM	Q9NS64	109 aa		0.91	□□□□□ -2.26
VPS8-223	ENST00000485024	TRAV12-3	A0A0B4J271	114 aa		0.9	□□□□□ -2.27
VPS8-223	ENST00000485024	EFCAB10	A6NFE3	127 aa		0.9	□□□□□ -2.27
VPS8-223	ENST00000485024	SNCG	O76070	127 aa		0.9	□□□□□ -2.27
VPS8-223	ENST00000485024	APELA	P0DMC3	54 aa		0.9	□□□□□ -2.27
VPS8-223	ENST00000485024	EMX2	Q04743	252 aa		0.9	□□□□□ -2.27
VPS8-223	ENST00000485024	C9orf116	Q5BN46	136 aa	Predicted RBP	0.9	□□□□□ -2.27
VPS8-223	ENST00000485024		Q5VV11	94 aa		0.9	□□□□□ -2.27
VPS8-223	ENST00000485024	FAM103A1	Q9BTL3	118 aa	Known RBP	0.9	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms