RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 ZNF73O43830 326 aaPredicted RBP11.36□□□□□ -0.59
ACTB-212ENST00000484841 E9PLD3 99 aa11.35□□□□□ -0.59
ACTB-212ENST00000484841 SEC61BP60468 96 aaKnown RBP11.34□□□□□ -0.59
ACTB-212ENST00000484841 Q8N377 158 aa11.34□□□□□ -0.59
ACTB-212ENST00000484841 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.6
ACTB-212ENST00000484841 KRTAP9-2Q9BYQ4 174 aa11.33□□□□□ -0.6
ACTB-212ENST00000484841 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
ACTB-212ENST00000484841 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
ACTB-212ENST00000484841 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
ACTB-212ENST00000484841 COLCA2A8K830 154 aa11.31□□□□□ -0.6
ACTB-212ENST00000484841 C5orf52A6NGY3 159 aa11.3□□□□□ -0.6
ACTB-212ENST00000484841 SLC25A34Q6PIV7 304 aa11.3□□□□□ -0.6
ACTB-212ENST00000484841 SLC7A5P1Q8MH63 180 aa11.29□□□□□ -0.6
ACTB-212ENST00000484841 SPANXCQ9NY87 97 aa11.29□□□□□ -0.6
ACTB-212ENST00000484841 MUC17Q685J3 4493 aa11.29□□□□□ -0.6
ACTB-212ENST00000484841 SYS1-DBNDD2H3BUS1 97 aa11.28□□□□□ -0.6
ACTB-212ENST00000484841 ST20-AS1Q8NBB2 130 aa11.28□□□□□ -0.6
ACTB-212ENST00000484841 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
ACTB-212ENST00000484841 LINC00308Q8TCZ7 52 aa11.26□□□□□ -0.61
ACTB-212ENST00000484841 DHRS4-AS1Q9P1J3 65 aa11.26□□□□□ -0.61
ACTB-212ENST00000484841 TIMM17BO60830 172 aa11.25□□□□□ -0.61
ACTB-212ENST00000484841 LINC01547P58512 204 aaPredicted RBP11.25□□□□□ -0.61
ACTB-212ENST00000484841 FAT4Q6V0I7 4981 aa11.25□□□□□ -0.61
ACTB-212ENST00000484841 ZNF815PA8K554 130 aa11.24□□□□□ -0.61
ACTB-212ENST00000484841 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
ACTB-212ENST00000484841 SPANXDQ9BXN6 97 aa11.23□□□□□ -0.61
ACTB-212ENST00000484841 LAMTOR3Q9UHA4 124 aa11.23□□□□□ -0.61
ACTB-212ENST00000484841 PET117Q6UWS5 81 aa11.22□□□□□ -0.61
ACTB-212ENST00000484841 LINC00518Q8N0U6 118 aa11.22□□□□□ -0.61
ACTB-212ENST00000484841 LINC01545Q5VT33 79 aa11.21□□□□□ -0.61
ACTB-212ENST00000484841 LITAFQ99732 161 aa11.2□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BKO60814 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BJP06899 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BOP23527 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 COX7BP24311 80 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BBP33778 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BDP58876 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BCP62807 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 TAL2Q16559 108 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST2H2BEQ16778 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.19□□□□□ -0.62
ACTB-212ENST00000484841 HRCT1Q6UXD1 115 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BHQ93079 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BNQ99877 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 HIST1H2BMQ99879 126 aa11.19□□□□□ -0.62
ACTB-212ENST00000484841 SPRR1BP22528 89 aa11.18□□□□□ -0.62
ACTB-212ENST00000484841 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
ACTB-212ENST00000484841 XP32Q5T750 250 aa11.17□□□□□ -0.62
ACTB-212ENST00000484841 SCGB1D4Q6XE38 83 aa11.16□□□□□ -0.62
ACTB-212ENST00000484841 COPS9Q8WXC6 57 aa11.16□□□□□ -0.62
ACTB-212ENST00000484841 ELOF1P60002 83 aaKnown RBP11.15□□□□□ -0.62
ACTB-212ENST00000484841 DEFB105AQ8NG35 78 aa11.15□□□□□ -0.62
ACTB-212ENST00000484841 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
ACTB-212ENST00000484841 KRTDAPP60985 99 aa11.13□□□□□ -0.63
ACTB-212ENST00000484841 TTTY13Q9BZ97 58 aa11.13□□□□□ -0.63
ACTB-212ENST00000484841 C20orf202A1L168 122 aa11.12□□□□□ -0.63
ACTB-212ENST00000484841 KRTAP4-1Q9BYQ7 146 aa11.12□□□□□ -0.63
ACTB-212ENST00000484841 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
ACTB-212ENST00000484841 Q1RN00 199 aa11.11□□□□□ -0.63
ACTB-212ENST00000484841 PRO1933Q9H354 126 aa11.11□□□□□ -0.63
ACTB-212ENST00000484841 TRBV7-6A0A0J9YX20 115 aa11.09□□□□□ -0.63
ACTB-212ENST00000484841 A6NDN8 102 aa11.09□□□□□ -0.63
ACTB-212ENST00000484841 A0A1B0GWB2 263 aa11.08□□□□□ -0.64
ACTB-212ENST00000484841 IFITM1P13164 125 aa11.08□□□□□ -0.64
ACTB-212ENST00000484841 CD164Q04900 197 aa11.08□□□□□ -0.64
ACTB-212ENST00000484841 H7C2G1 150 aa11.07□□□□□ -0.64
ACTB-212ENST00000484841 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
ACTB-212ENST00000484841 AKR1D1P51857 326 aa11.06□□□□□ -0.64
ACTB-212ENST00000484841 Q6ZVH6 145 aa11.05□□□□□ -0.64
ACTB-212ENST00000484841 KRTAP9-6A0A140TA67 174 aa11.03□□□□□ -0.64
ACTB-212ENST00000484841 A4D1N5 150 aa11.03□□□□□ -0.64
ACTB-212ENST00000484841 COA6Q5JTJ3 125 aaKnown RBP11.02□□□□□ -0.65
ACTB-212ENST00000484841 NHP2Q9NX24 153 aaKnown RBP11.02□□□□□ -0.65
ACTB-212ENST00000484841 ANKRD39Q53RE8 183 aa11.01□□□□□ -0.65
ACTB-212ENST00000484841 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
ACTB-212ENST00000484841 MUSTN1Q8IVN3 82 aa11.01□□□□□ -0.65
ACTB-212ENST00000484841 IGLV8-61A0A075B6I0 122 aa11□□□□□ -0.65
ACTB-212ENST00000484841 TRAV13-2A0A0B4J235 113 aa11□□□□□ -0.65
ACTB-212ENST00000484841 ATOH7Q8N100 152 aa11□□□□□ -0.65
ACTB-212ENST00000484841 IGLV5-48A0A075B6I7 105 aa10.97□□□□□ -0.65
ACTB-212ENST00000484841 SMIM29Q86T20 159 aa10.97□□□□□ -0.65
ACTB-212ENST00000484841 PCP2Q8IVA1 136 aa10.96□□□□□ -0.65
ACTB-212ENST00000484841 SNRPEP62304 92 aaKnown RBP10.95□□□□□ -0.66
ACTB-212ENST00000484841 VAMP3Q15836 100 aa10.95□□□□□ -0.66
ACTB-212ENST00000484841 Q5XG85 94 aa10.95□□□□□ -0.66
ACTB-212ENST00000484841 F8WEM9 126 aa10.94□□□□□ -0.66
ACTB-212ENST00000484841 SMIM11BQ8TCY0 68 aa10.93□□□□□ -0.66
ACTB-212ENST00000484841 TCL1BO95988 128 aa10.92□□□□□ -0.66
ACTB-212ENST00000484841 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
ACTB-212ENST00000484841 A0A0G2JQZ4 141 aa10.9□□□□□ -0.66
ACTB-212ENST00000484841 HSBP1L1C9JCN9 74 aa10.89□□□□□ -0.67
ACTB-212ENST00000484841 LCE2DQ5TA82 110 aaPredicted RBP10.87□□□□□ -0.67
ACTB-212ENST00000484841 S100A2P29034 98 aa10.85□□□□□ -0.67
ACTB-212ENST00000484841 LCE2CQ5TA81 110 aa10.85□□□□□ -0.67
ACTB-212ENST00000484841 hADV29S1A0JD25 119 aa10.83□□□□□ -0.68
ACTB-212ENST00000484841 CFC1BP0CG36 223 aa10.83□□□□□ -0.68
ACTB-212ENST00000484841 RPL37P61927 97 aaKnown RBP10.83□□□□□ -0.68
ACTB-212ENST00000484841 LINC00575Q6W349 94 aa10.82□□□□□ -0.68
ACTB-212ENST00000484841 Q6JHZ5 121 aa10.81□□□□□ -0.68
ACTB-212ENST00000484841 Q6ZQY7 126 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms