RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 C15orf56Q8N910 161 aa12.97□□□□□ -0.33
RPUSD3-216ENST00000484134 HELZ2Q9BYK8 2649 aaKnown RBP12.96□□□□□ -0.33
RPUSD3-216ENST00000484134 Q6ZRP5 223 aa12.95□□□□□ -0.34
RPUSD3-216ENST00000484134 DEFB105AQ8NG35 78 aa12.95□□□□□ -0.34
RPUSD3-216ENST00000484134 PRYO14603 147 aa12.95□□□□□ -0.34
RPUSD3-216ENST00000484134 SMR3AQ99954 134 aa12.94□□□□□ -0.34
RPUSD3-216ENST00000484134 HIGD2AQ9BW72 106 aa12.94□□□□□ -0.34
RPUSD3-216ENST00000484134 TRRAPQ9Y4A5 3859 aa12.93□□□□□ -0.34
RPUSD3-216ENST00000484134 Q8N377 158 aa12.93□□□□□ -0.34
RPUSD3-216ENST00000484134 Q6ZTC4 211 aa12.91□□□□□ -0.34
RPUSD3-216ENST00000484134 NOTCH2Q04721 2471 aa12.91□□□□□ -0.34
RPUSD3-216ENST00000484134 MPLKIPQ8TAP9 179 aa12.89□□□□□ -0.35
RPUSD3-216ENST00000484134 FUSP35637 526 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPUSD3-216ENST00000484134 C1orf43Q9BWL3 253 aa12.88□□□□□ -0.35
RPUSD3-216ENST00000484134 IGLV5-48A0A075B6I7 105 aa12.87□□□□□ -0.35
RPUSD3-216ENST00000484134 KPRPQ5T749 579 aaPredicted RBP12.87□□□□□ -0.35
RPUSD3-216ENST00000484134 SERTAD4-AS1Q5TG53 156 aa12.87□□□□□ -0.35
RPUSD3-216ENST00000484134 KCNQ1DNQ9H478 68 aa12.87□□□□□ -0.35
RPUSD3-216ENST00000484134 TEP1Q99973 2627 aaKnown RBP12.87□□□□□ -0.35
RPUSD3-216ENST00000484134 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
RPUSD3-216ENST00000484134 FAM30AQ9NZY2 134 aa12.86□□□□□ -0.35
RPUSD3-216ENST00000484134 C7orf33Q8WU49 177 aa12.85□□□□□ -0.35
RPUSD3-216ENST00000484134 ATRQ13535 2644 aa12.85□□□□□ -0.35
RPUSD3-216ENST00000484134 A0A1W2PNM2 257 aa12.85□□□□□ -0.35
RPUSD3-216ENST00000484134 PKIGQ9Y2B9 76 aa12.84□□□□□ -0.35
RPUSD3-216ENST00000484134 BRK1Q8WUW1 75 aa12.84□□□□□ -0.35
RPUSD3-216ENST00000484134 FASNP49327 2511 aaKnown RBP12.83□□□□□ -0.36
RPUSD3-216ENST00000484134 ESRGQ1W209 222 aa12.83□□□□□ -0.36
RPUSD3-216ENST00000484134 NKAPP1Q8N9T2 125 aa12.81□□□□□ -0.36
RPUSD3-216ENST00000484134 SYCNQ0VAF6 134 aa12.8□□□□□ -0.36
RPUSD3-216ENST00000484134 Q9BRP9 147 aa12.8□□□□□ -0.36
RPUSD3-216ENST00000484134 RPL37AP8A6NKH3 93 aa12.79□□□□□ -0.36
RPUSD3-216ENST00000484134 IGKV2D-24A0A075B6R9 120 aa12.78□□□□□ -0.36
RPUSD3-216ENST00000484134 ST20-AS1Q8NBB2 130 aa12.78□□□□□ -0.36
RPUSD3-216ENST00000484134 LCE6AA0A183 80 aa12.77□□□□□ -0.37
RPUSD3-216ENST00000484134 J3QKU1 62 aa12.77□□□□□ -0.37
RPUSD3-216ENST00000484134 TNP2Q05952 138 aa12.77□□□□□ -0.37
RPUSD3-216ENST00000484134 RETNQ9HD89 108 aa12.77□□□□□ -0.37
RPUSD3-216ENST00000484134 KRTAP4-16G5E9R7 235 aaPredicted RBP12.76□□□□□ -0.37
RPUSD3-216ENST00000484134 C1orf137Q5JT78 98 aa12.76□□□□□ -0.37
RPUSD3-216ENST00000484134 Q6ZRX8 168 aa12.76□□□□□ -0.37
RPUSD3-216ENST00000484134 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
RPUSD3-216ENST00000484134 FAM168BA1KXE4 195 aa12.75□□□□□ -0.37
RPUSD3-216ENST00000484134 TENM3Q9P273 2699 aa12.75□□□□□ -0.37
RPUSD3-216ENST00000484134 DSCR10P59022 87 aa12.74□□□□□ -0.37
RPUSD3-216ENST00000484134 H3BNG1 76 aa12.73□□□□□ -0.37
RPUSD3-216ENST00000484134 DHRS4-AS1Q9P1J3 65 aa12.73□□□□□ -0.37
RPUSD3-216ENST00000484134 LRCOL1A6NCL2 159 aa12.72□□□□□ -0.37
RPUSD3-216ENST00000484134 Q8NBF4 154 aa12.72□□□□□ -0.37
RPUSD3-216ENST00000484134 hDV103S1A0JD37 113 aa12.72□□□□□ -0.37
RPUSD3-216ENST00000484134 F8P00451 2351 aa12.71□□□□□ -0.37
RPUSD3-216ENST00000484134 ZCCHC13Q8WW36 166 aaKnown RBP12.71□□□□□ -0.37
RPUSD3-216ENST00000484134 K7EQZ3 153 aa12.7□□□□□ -0.38
RPUSD3-216ENST00000484134 KRTAP7-1Q8IUC3 87 aa12.7□□□□□ -0.38
RPUSD3-216ENST00000484134 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
RPUSD3-216ENST00000484134 A0A1B0GW54 56 aa12.7□□□□□ -0.38
RPUSD3-216ENST00000484134 HECTD1Q9ULT8 2610 aa12.69□□□□□ -0.38
RPUSD3-216ENST00000484134 IGLV1-50A0A075B6I6 118 aa12.69□□□□□ -0.38
RPUSD3-216ENST00000484134 SPRR4Q96PI1 79 aa12.69□□□□□ -0.38
RPUSD3-216ENST00000484134 F8WDY8 70 aa12.68□□□□□ -0.38
RPUSD3-216ENST00000484134 LINC01556Q5JQF7 62 aa12.68□□□□□ -0.38
RPUSD3-216ENST00000484134 SPRR1AP35321 89 aa12.68□□□□□ -0.38
RPUSD3-216ENST00000484134 C1orf64Q8NEQ6 169 aa12.68□□□□□ -0.38
RPUSD3-216ENST00000484134 ETDCA0A1B0GVM5 59 aa12.67□□□□□ -0.38
RPUSD3-216ENST00000484134 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
RPUSD3-216ENST00000484134 A0A0G2JQZ4 141 aa12.65□□□□□ -0.38
RPUSD3-216ENST00000484134 A0A1W2PNN7 141 aa12.65□□□□□ -0.38
RPUSD3-216ENST00000484134 PLA2G2DQ9UNK4 145 aa12.65□□□□□ -0.38
RPUSD3-216ENST00000484134 TLX1NBP0CAT3 122 aa12.64□□□□□ -0.39
RPUSD3-216ENST00000484134 ANK2Q01484 3957 aa12.63□□□□□ -0.39
RPUSD3-216ENST00000484134 CASC10Q5T4H9 136 aa12.63□□□□□ -0.39
RPUSD3-216ENST00000484134 INAFM1C9JVW0 142 aa12.62□□□□□ -0.39
RPUSD3-216ENST00000484134 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
RPUSD3-216ENST00000484134 IGLV5-37A0A075B6J1 123 aa12.61□□□□□ -0.39
RPUSD3-216ENST00000484134 PRR4Q16378 134 aa12.6□□□□□ -0.39
RPUSD3-216ENST00000484134 C1orf195Q5TG92 126 aa12.6□□□□□ -0.39
RPUSD3-216ENST00000484134 DEFB116Q30KQ4 102 aa12.58□□□□□ -0.4
RPUSD3-216ENST00000484134 HCG22E2RYF7 251 aa12.57□□□□□ -0.4
RPUSD3-216ENST00000484134 UBE2BP63146 152 aa12.57□□□□□ -0.4
RPUSD3-216ENST00000484134 Q1T7F1 81 aa12.57□□□□□ -0.4
RPUSD3-216ENST00000484134 LINC00476Q8WZB0 136 aa12.56□□□□□ -0.4
RPUSD3-216ENST00000484134 DEFB131BA0A096LNP1 70 aa12.56□□□□□ -0.4
RPUSD3-216ENST00000484134 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
RPUSD3-216ENST00000484134 PSCAO43653 123 aa12.55□□□□□ -0.4
RPUSD3-216ENST00000484134 DNAH10OSP0CZ25 163 aa12.55□□□□□ -0.4
RPUSD3-216ENST00000484134 KRTAP10-11P60412 298 aa12.55□□□□□ -0.4
RPUSD3-216ENST00000484134 MRPL55Q7Z7F7 128 aaKnown RBP12.55□□□□□ -0.4
RPUSD3-216ENST00000484134 FLNBO75369 2602 aaKnown RBP12.52□□□□□ -0.41
RPUSD3-216ENST00000484134 IGFL1Q6UW32 110 aa12.52□□□□□ -0.41
RPUSD3-216ENST00000484134 DNAH1Q9P2D7 4330 aa12.51□□□□□ -0.41
RPUSD3-216ENST00000484134 PSPHP1O15172 72 aa12.51□□□□□ -0.41
RPUSD3-216ENST00000484134 CYP4F30PQ9H0H9 118 aa12.51□□□□□ -0.41
RPUSD3-216ENST00000484134 WFDC13Q8IUB5 93 aa12.5□□□□□ -0.41
RPUSD3-216ENST00000484134 PRB2P02812 416 aaPredicted RBP12.49□□□□□ -0.41
RPUSD3-216ENST00000484134 TRAV22A0A0B4J277 110 aa12.49□□□□□ -0.41
RPUSD3-216ENST00000484134 REG3GQ6UW15 175 aa12.48□□□□□ -0.41
RPUSD3-216ENST00000484134 C11orf45Q8TAV5 145 aa12.47□□□□□ -0.41
RPUSD3-216ENST00000484134 SRRM2Q9UQ35 2752 aaKnown RBP12.46□□□□□ -0.41
RPUSD3-216ENST00000484134 RPL37AP61513 92 aaKnown RBP12.46□□□□□ -0.42
RPUSD3-216ENST00000484134 PRR15Q8IV56 129 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms