RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 FAT4Q6V0I7 4981 aa11.25□□□□□ -0.61
HPS4-213ENST00000483631 ADAMTSL4-AS1Q5T5F5 129 aa11.24□□□□□ -0.61
HPS4-213ENST00000483631 ZNF73O43830 326 aaPredicted RBP11.23□□□□□ -0.61
HPS4-213ENST00000483631 MOBPQ13875 183 aa11.23□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BKO60814 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 TIMM17BO60830 172 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BHQ93079 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BNQ99877 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 HIST1H2BMQ99879 126 aa11.22□□□□□ -0.61
HPS4-213ENST00000483631 IGLV9-49A0A0B4J1Y8 123 aa11.21□□□□□ -0.61
HPS4-213ENST00000483631 EIF4EBP3O60516 100 aaPredicted RBP11.21□□□□□ -0.61
HPS4-213ENST00000483631 KRTAP13-3Q3SY46 172 aa11.21□□□□□ -0.61
HPS4-213ENST00000483631 LINC01545Q5VT33 79 aa11.21□□□□□ -0.61
HPS4-213ENST00000483631 SPANXCQ9NY87 97 aa11.21□□□□□ -0.61
HPS4-213ENST00000483631 KRTAP9-6A0A140TA67 174 aa11.2□□□□□ -0.62
HPS4-213ENST00000483631 HINT1P49773 126 aaPredicted RBP11.2□□□□□ -0.62
HPS4-213ENST00000483631 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
HPS4-213ENST00000483631 NPC2P61916 151 aa11.19□□□□□ -0.62
HPS4-213ENST00000483631 LCE2AQ5TA79 106 aaPredicted RBP11.19□□□□□ -0.62
HPS4-213ENST00000483631 LITAFQ99732 161 aa11.19□□□□□ -0.62
HPS4-213ENST00000483631 Q8N377 158 aa11.18□□□□□ -0.62
HPS4-213ENST00000483631 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
HPS4-213ENST00000483631 SLC25A20O43772 301 aa11.17□□□□□ -0.62
HPS4-213ENST00000483631 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
HPS4-213ENST00000483631 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
HPS4-213ENST00000483631 SPRR1BP22528 89 aa11.13□□□□□ -0.63
HPS4-213ENST00000483631 ASB16-AS1Q495Z4 193 aa11.13□□□□□ -0.63
HPS4-213ENST00000483631 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
HPS4-213ENST00000483631 DHRS4-AS1Q9P1J3 65 aa11.13□□□□□ -0.63
HPS4-213ENST00000483631 C9orf153Q5TBE3 101 aa11.12□□□□□ -0.63
HPS4-213ENST00000483631 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
HPS4-213ENST00000483631 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
HPS4-213ENST00000483631 ST20-AS1Q8NBB2 130 aa11.11□□□□□ -0.63
HPS4-213ENST00000483631 OR13C6PQ8NH95 151 aa11.11□□□□□ -0.63
HPS4-213ENST00000483631 C3orf79P0CE67 100 aa11.09□□□□□ -0.63
HPS4-213ENST00000483631 SEC61BP60468 96 aaKnown RBP11.08□□□□□ -0.64
HPS4-213ENST00000483631 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
HPS4-213ENST00000483631 COPS9Q8WXC6 57 aa11.07□□□□□ -0.64
HPS4-213ENST00000483631 TRBV7-6A0A0J9YX20 115 aa11.04□□□□□ -0.64
HPS4-213ENST00000483631 C20orf202A1L168 122 aa11.04□□□□□ -0.64
HPS4-213ENST00000483631 COX7BP24311 80 aa11.04□□□□□ -0.64
HPS4-213ENST00000483631 AKR1D1P51857 326 aa11.04□□□□□ -0.64
HPS4-213ENST00000483631 TTTY13Q9BZ97 58 aa11.04□□□□□ -0.64
HPS4-213ENST00000483631 LAMTOR3Q9UHA4 124 aa11.04□□□□□ -0.64
HPS4-213ENST00000483631 IFITM1P13164 125 aa11.03□□□□□ -0.64
HPS4-213ENST00000483631 Q6ZVH6 145 aa11.03□□□□□ -0.64
HPS4-213ENST00000483631 LIMD2Q9BT23 127 aa11.03□□□□□ -0.64
HPS4-213ENST00000483631 KRTDAPP60985 99 aa11.02□□□□□ -0.65
HPS4-213ENST00000483631 C6orf99Q4VX62 202 aa11.02□□□□□ -0.65
HPS4-213ENST00000483631 XP32Q5T750 250 aa11.02□□□□□ -0.65
HPS4-213ENST00000483631 SCGB1D4Q6XE38 83 aa11.02□□□□□ -0.65
HPS4-213ENST00000483631 CD164Q04900 197 aa10.98□□□□□ -0.65
HPS4-213ENST00000483631 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
HPS4-213ENST00000483631 A0A1B0GWB2 263 aa10.97□□□□□ -0.65
HPS4-213ENST00000483631 ANKRD39Q53RE8 183 aa10.97□□□□□ -0.65
HPS4-213ENST00000483631 TAL2Q16559 108 aa10.96□□□□□ -0.65
HPS4-213ENST00000483631 A4D1N5 150 aa10.94□□□□□ -0.66
HPS4-213ENST00000483631 SNRPEP62304 92 aaKnown RBP10.94□□□□□ -0.66
HPS4-213ENST00000483631 PRO1933Q9H354 126 aa10.94□□□□□ -0.66
HPS4-213ENST00000483631 KRTAP4-1Q9BYQ7 146 aa10.93□□□□□ -0.66
HPS4-213ENST00000483631 IGLV5-48A0A075B6I7 105 aa10.92□□□□□ -0.66
HPS4-213ENST00000483631 Q5XG85 94 aa10.92□□□□□ -0.66
HPS4-213ENST00000483631 A6NDN8 102 aa10.91□□□□□ -0.66
HPS4-213ENST00000483631 LINC01547P58512 204 aaPredicted RBP10.91□□□□□ -0.66
HPS4-213ENST00000483631 MUSTN1Q8IVN3 82 aa10.91□□□□□ -0.66
HPS4-213ENST00000483631 TRAV13-2A0A0B4J235 113 aa10.9□□□□□ -0.66
HPS4-213ENST00000483631 Q1RN00 199 aa10.9□□□□□ -0.66
HPS4-213ENST00000483631 HRCT1Q6UXD1 115 aa10.9□□□□□ -0.66
HPS4-213ENST00000483631 PCP2Q8IVA1 136 aa10.9□□□□□ -0.66
HPS4-213ENST00000483631 ATOH7Q8N100 152 aa10.9□□□□□ -0.66
HPS4-213ENST00000483631 DEFB105AQ8NG35 78 aa10.9□□□□□ -0.66
HPS4-213ENST00000483631 SMIM29Q86T20 159 aa10.89□□□□□ -0.67
HPS4-213ENST00000483631 NHP2Q9NX24 153 aaKnown RBP10.89□□□□□ -0.67
HPS4-213ENST00000483631 H7C2G1 150 aa10.88□□□□□ -0.67
HPS4-213ENST00000483631 SMIM11BQ8TCY0 68 aa10.83□□□□□ -0.68
HPS4-213ENST00000483631 VAMP3Q15836 100 aa10.8□□□□□ -0.68
HPS4-213ENST00000483631 HIST3H2BBQ8N257 126 aa10.79□□□□□ -0.68
HPS4-213ENST00000483631 C9orf92A6NGG3 77 aa10.78□□□□□ -0.68
HPS4-213ENST00000483631 HSBP1L1C9JCN9 74 aa10.78□□□□□ -0.68
HPS4-213ENST00000483631 S100A2P29034 98 aa10.78□□□□□ -0.68
HPS4-213ENST00000483631 C1orf195Q5TG92 126 aa10.78□□□□□ -0.68
HPS4-213ENST00000483631 HIST1H2BLQ99880 126 aa10.78□□□□□ -0.68
HPS4-213ENST00000483631 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
HPS4-213ENST00000483631 TCL1BO95988 128 aa10.74□□□□□ -0.69
HPS4-213ENST00000483631 LINC00575Q6W349 94 aa10.74□□□□□ -0.69
HPS4-213ENST00000483631 F8WEM9 126 aa10.73□□□□□ -0.69
HPS4-213ENST00000483631 FSIP2Q5CZC0 6907 aa10.72□□□□□ -0.69
HPS4-213ENST00000483631 IGLV8-61A0A075B6I0 122 aa10.72□□□□□ -0.69
HPS4-213ENST00000483631 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
HPS4-213ENST00000483631 A0A0G2JQZ4 141 aa10.7□□□□□ -0.7
HPS4-213ENST00000483631 hADV29S1A0JD25 119 aa10.7□□□□□ -0.7
HPS4-213ENST00000483631 KRTAP19-2Q3LHN2 52 aa10.7□□□□□ -0.7
HPS4-213ENST00000483631 Q6JHZ5 121 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms