RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 UMAD1C9J7I0 102 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 M0R2Z0 102 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 SLC25A5P05141 298 aaKnown RBP1.84□□□□□ -2.11
SHQ1-208ENST00000482785 CXCL1P09341 107 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 TPT1P13693 172 aaKnown RBP1.84□□□□□ -2.11
SHQ1-208ENST00000482785 AZU1P20160 251 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 RAB5CP51148 216 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 KRTAP12-2P59991 146 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 HIST1H1AQ02539 215 aaPredicted RBP1.84□□□□□ -2.11
SHQ1-208ENST00000482785 PDE6HQ13956 83 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 MIC13Q5XKP0 118 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 RPL7L1Q6DKI1 246 aaKnown RBP1.84□□□□□ -2.11
SHQ1-208ENST00000482785 LYPD5Q6UWN5 251 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 HRCT1Q6UXD1 115 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 Q6ZTI0 123 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 TMEM263Q8WUH6 116 aaKnown RBP1.84□□□□□ -2.11
SHQ1-208ENST00000482785 DPH3Q96FX2 82 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 FAM167A-AS1Q96KT0 104 aa1.84□□□□□ -2.11
SHQ1-208ENST00000482785 TRAV1-1A0A0B4J248 108 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 CTXND1A0A1B0GTU2 59 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 RBAKDNA6NC62 111 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 A8MWV9 139 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 HIST1H2BKO60814 126 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 HIST1H2BJP06899 126 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 P0C880 135 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 RPL35P42766 123 aaKnown RBP1.83□□□□□ -2.12
SHQ1-208ENST00000482785 NDUFA6P56556 154 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 HBBP68871 147 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 SOSTDC1Q6X4U4 206 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 Q6ZQT0 140 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 C9orf62Q8N4C0 152 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 AGPAT4-IT1Q9H0P7 198 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 NOP10Q9NPE3 64 aaKnown RBP1.83□□□□□ -2.12
SHQ1-208ENST00000482785 TMEM167BQ9NRX6 74 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 LENEPQ9Y5L5 61 aa1.83□□□□□ -2.12
SHQ1-208ENST00000482785 TRAV12-3A0A0B4J271 114 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 IGHV1-58A0A0C4DH39 117 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 TRBV7-6A0A0J9YX20 115 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 A6NN06 94 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 M0R3E3 92 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 SPINK4O60575 86 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 GPX1P07203 203 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 PYYP10082 97 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 HTN1P15515 57 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 GCHFRP30047 84 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 AKR1C3P42330 323 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 CKS1BP61024 79 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 KRTAP13-3Q3SY46 172 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 FAM74A1Q5RGS3 127 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 TEX261Q6UWH6 196 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 FAM213BQ8TBF2 198 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 SFT2D1Q8WV19 159 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 PLAC8Q9NZF1 115 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 PRO0461Q9UI25 63 aa1.82□□□□□ -2.12
SHQ1-208ENST00000482785 TRGV2A0A075B6R0 118 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 SDHAF1A6NFY7 115 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 F6UZH7 168 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 J3QQQ9 107 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 TIMM17BO60830 172 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 ARL14EPLP0DKL9 152 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 UBE2L3P68036 154 aaKnown RBP1.81□□□□□ -2.12
SHQ1-208ENST00000482785 Q6AWC8 147 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 TXNDC17Q9BRA2 123 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 TCEAL7Q9BRU2 100 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 MANBALQ9NQG1 85 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 PRO0255Q9UI72 69 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 ARL2-SNX15V9GYD0 113 aa1.81□□□□□ -2.12
SHQ1-208ENST00000482785 IGKV2-40A0A087WW87 121 aaPredicted RBP1.8□□□□□ -2.12
SHQ1-208ENST00000482785 TRGV1A0A0A0MS02 117 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 TRAV21A0A0B4J279 112 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 TRBV6-1A0A0K0K1D8 114 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 M0R2P5 195 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 DPM2O94777 84 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 IGKV2D-40P01614 121 aaPredicted RBP1.8□□□□□ -2.12
SHQ1-208ENST00000482785 BAALC-AS2P0C853 105 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 FABP2P12104 132 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 ALKAL2Q6UX46 152 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 C9orf163Q8N9P6 203 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 C5orf17Q8NAS9 161 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 Q8TAT8 98 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 HSPB8Q9UJY1 196 aa1.8□□□□□ -2.12
SHQ1-208ENST00000482785 LOC107984640A0A0U1RRK4 108 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 TRBV6-4A0A1B0GX49 114 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 C9JAW5 83 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 K7ERJ3 54 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 TCRAP04437 139 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 UBE2D1P51668 147 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 PEA15Q15121 130 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 CLLU1Q5K131 121 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 SPACA4Q8TDM5 124 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 ZC2HC1AQ96GY0 325 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 C14orf132Q9NPU4 83 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 GNG13Q9P2W3 67 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 ZFP30Q9Y2G7 519 aa1.79□□□□□ -2.12
SHQ1-208ENST00000482785 TRAV13-1A0A0B4J241 112 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 TRGV4A0A0C4DH28 118 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 A0A0G2JQZ4 141 aa1.78□□□□□ -2.12
SHQ1-208ENST00000482785 MGST1P10620 155 aaKnown RBP1.78□□□□□ -2.12
SHQ1-208ENST00000482785 UBE2G1P62253 170 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms