RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
HLA-DQA1-206ENST00000482745 TRBV10-1A0A0K0K1A3 114 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 FAM236DA0A1B0GTK5 79 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 FAM236CP0DP71 79 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 ORMDL1Q9P0S3 153 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 LECT2O14960 151 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 BCE1O60756 84 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 MIR7-3HGQ8N6C7 128 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 TMEM243Q9BU79 118 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
HLA-DQA1-206ENST00000482745 JMJD7-PLA2G4BH0Y9G9 81 aa6.69□□□□□ -1.34
HLA-DQA1-206ENST00000482745 NCR3O14931 201 aa6.69□□□□□ -1.34
HLA-DQA1-206ENST00000482745 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
HLA-DQA1-206ENST00000482745 APOBP04114 4563 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-206ENST00000482745 PFN2P35080 140 aa6.68□□□□□ -1.34
HLA-DQA1-206ENST00000482745 COX7B2Q8TF08 81 aa6.68□□□□□ -1.34
HLA-DQA1-206ENST00000482745 CDC42SE2Q9NRR3 84 aa6.68□□□□□ -1.34
HLA-DQA1-206ENST00000482745 LRCOL1A6NCL2 159 aa6.67□□□□□ -1.34
HLA-DQA1-206ENST00000482745 SS18Q15532 418 aa6.67□□□□□ -1.34
HLA-DQA1-206ENST00000482745 LINC00167Q96N53 147 aa6.67□□□□□ -1.34
HLA-DQA1-206ENST00000482745 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
HLA-DQA1-206ENST00000482745 XCL1P47992 114 aa6.66□□□□□ -1.34
HLA-DQA1-206ENST00000482745 C20orf197Q8N268 126 aa6.66□□□□□ -1.34
HLA-DQA1-206ENST00000482745 KLK12Q9UKR0 248 aa6.66□□□□□ -1.34
HLA-DQA1-206ENST00000482745 TRAV23DV6A0A075B6W5 121 aa6.65□□□□□ -1.34
HLA-DQA1-206ENST00000482745 LINC00158P58513 81 aa6.65□□□□□ -1.34
HLA-DQA1-206ENST00000482745 IGLV5-52A0A0A0MRZ9 124 aa6.65□□□□□ -1.35
HLA-DQA1-206ENST00000482745 TRBV6-8A0A0A6YYG3 113 aa6.65□□□□□ -1.35
HLA-DQA1-206ENST00000482745 KRTAP10-1P60331 282 aa6.65□□□□□ -1.35
HLA-DQA1-206ENST00000482745 Q8N814 137 aa6.65□□□□□ -1.35
HLA-DQA1-206ENST00000482745 UBL5Q9BZL1 73 aa6.65□□□□□ -1.35
HLA-DQA1-206ENST00000482745 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.35
HLA-DQA1-206ENST00000482745 TRAV7A0A075B6U4 112 aa6.64□□□□□ -1.35
HLA-DQA1-206ENST00000482745 IGKV2D-24A0A075B6R9 120 aa6.64□□□□□ -1.35
HLA-DQA1-206ENST00000482745 H7BZZ5 65 aa6.64□□□□□ -1.35
HLA-DQA1-206ENST00000482745 TMEM256-PLSCR3K7ERE1 68 aa6.64□□□□□ -1.35
HLA-DQA1-206ENST00000482745 UBE2L6O14933 153 aa6.64□□□□□ -1.35
HLA-DQA1-206ENST00000482745 ENHOQ6UWT2 76 aa6.64□□□□□ -1.35
HLA-DQA1-206ENST00000482745 RMI2Q96E14 147 aa6.64□□□□□ -1.35
HLA-DQA1-206ENST00000482745 KLKP1Q107X0 134 aa6.63□□□□□ -1.35
HLA-DQA1-206ENST00000482745 NTM-AS1Q6ZSK4 140 aa6.63□□□□□ -1.35
HLA-DQA1-206ENST00000482745 Q8N1X5 172 aa6.63□□□□□ -1.35
HLA-DQA1-206ENST00000482745 SLPIP03973 132 aa6.62□□□□□ -1.35
HLA-DQA1-206ENST00000482745 FAM19A1Q7Z5A9 133 aa6.62□□□□□ -1.35
HLA-DQA1-206ENST00000482745 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-206ENST00000482745 SMIM26A0A096LP01 95 aa6.61□□□□□ -1.35
HLA-DQA1-206ENST00000482745 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-206ENST00000482745 TOMM7Q9P0U1 55 aa6.61□□□□□ -1.35
HLA-DQA1-206ENST00000482745 HAMPP81172 84 aa6.61□□□□□ -1.35
HLA-DQA1-206ENST00000482745 ATP5EP56381 51 aaPredicted RBP6.6□□□□□ -1.35
HLA-DQA1-206ENST00000482745 C1orf43Q9BWL3 253 aa6.6□□□□□ -1.35
HLA-DQA1-206ENST00000482745 NDUFC1O43677 76 aa6.59□□□□□ -1.35
HLA-DQA1-206ENST00000482745 CLPSL2Q6UWE3 100 aa6.59□□□□□ -1.35
HLA-DQA1-206ENST00000482745 A0A087WZ39 114 aa6.58□□□□□ -1.36
HLA-DQA1-206ENST00000482745 IGHV3OR16-9A0A0B4J2B5 98 aa6.58□□□□□ -1.36
HLA-DQA1-206ENST00000482745 LOC110117498A0A087WWA1 95 aa6.57□□□□□ -1.36
HLA-DQA1-206ENST00000482745 F8WDY8 70 aa6.57□□□□□ -1.36
HLA-DQA1-206ENST00000482745 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
HLA-DQA1-206ENST00000482745 LINC00269Q8N2A0 174 aa6.57□□□□□ -1.36
HLA-DQA1-206ENST00000482745 Q5VSD8 79 aa6.56□□□□□ -1.36
HLA-DQA1-206ENST00000482745 Q6ZQT0 140 aa6.56□□□□□ -1.36
HLA-DQA1-206ENST00000482745 FAM30AQ9NZY2 134 aa6.56□□□□□ -1.36
HLA-DQA1-206ENST00000482745 CXCL6P80162 114 aa6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 PRR34Q9NV39 138 aa6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 IGLV10-54A0A075B6I4 117 aa6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 F8WEM9 126 aa6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 ZNF561-AS1K7EIQ3 104 aa6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 LINC01547P58512 204 aaPredicted RBP6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 RBM3P98179 157 aaKnown RBP6.55□□□□□ -1.36
HLA-DQA1-206ENST00000482745 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
HLA-DQA1-206ENST00000482745 FAT1Q14517 4588 aa6.54□□□□□ -1.36
HLA-DQA1-206ENST00000482745 IGLV4-60A0A075B6I1 120 aa6.54□□□□□ -1.36
HLA-DQA1-206ENST00000482745 PDE6GP18545 87 aa6.54□□□□□ -1.36
HLA-DQA1-206ENST00000482745 REG3AQ06141 175 aa6.54□□□□□ -1.36
HLA-DQA1-206ENST00000482745 C14orf177Q52M58 125 aa6.54□□□□□ -1.36
HLA-DQA1-206ENST00000482745 C6orf226Q5I0X4 101 aa6.53□□□□□ -1.36
HLA-DQA1-206ENST00000482745 H3BQ85 93 aa6.53□□□□□ -1.36
HLA-DQA1-206ENST00000482745 Q8IZM0 81 aa6.53□□□□□ -1.36
HLA-DQA1-206ENST00000482745 VPS13BQ7Z7G8 4022 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 IGKV3OR2-268A0A0C4DH90 116 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 A0A1B0GUV1 79 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 SNURFQ9Y675 71 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 FAM229AH3BQW9 127 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 Q6ZSA8 131 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 Q6ZVQ6 151 aa6.52□□□□□ -1.37
HLA-DQA1-206ENST00000482745 TRBV7-4A0A0J9YYF1 115 aa6.51□□□□□ -1.37
HLA-DQA1-206ENST00000482745 COX17Q14061 63 aa6.51□□□□□ -1.37
HLA-DQA1-206ENST00000482745 KRTAP26-1Q6PEX3 210 aa6.51□□□□□ -1.37
HLA-DQA1-206ENST00000482745 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
HLA-DQA1-206ENST00000482745 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
HLA-DQA1-206ENST00000482745 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
HLA-DQA1-206ENST00000482745 ERC2-IT1O76042 136 aa6.5□□□□□ -1.37
HLA-DQA1-206ENST00000482745 SCXQ7RTU7 201 aa6.5□□□□□ -1.37
HLA-DQA1-206ENST00000482745 PKIGQ9Y2B9 76 aa6.5□□□□□ -1.37
HLA-DQA1-206ENST00000482745 LAMTOR3Q9UHA4 124 aa6.49□□□□□ -1.37
HLA-DQA1-206ENST00000482745 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms