RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ADAMTSL4-AS1Q5T5F5 129 aa11.49□□□□□ -0.57
MSH5-215ENST00000482280 Q8NBF4 154 aa11.49□□□□□ -0.57
MSH5-215ENST00000482280 OR13C6PQ8NH95 151 aa11.49□□□□□ -0.57
MSH5-215ENST00000482280 IGLV7-46A0A075B6I9 117 aa11.48□□□□□ -0.57
MSH5-215ENST00000482280 CDIP1Q9H305 208 aa11.48□□□□□ -0.57
MSH5-215ENST00000482280 SPANXCQ9NY87 97 aa11.48□□□□□ -0.57
MSH5-215ENST00000482280 ZNF73O43830 326 aaPredicted RBP11.47□□□□□ -0.57
MSH5-215ENST00000482280 TIMM17BO60830 172 aa11.47□□□□□ -0.57
MSH5-215ENST00000482280 LINC00483Q53H64 154 aa11.47□□□□□ -0.57
MSH5-215ENST00000482280 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
MSH5-215ENST00000482280 LPAP08519 4548 aa11.47□□□□□ -0.57
MSH5-215ENST00000482280 IGLV9-49A0A0B4J1Y8 123 aa11.46□□□□□ -0.57
MSH5-215ENST00000482280 C3orf79P0CE67 100 aa11.46□□□□□ -0.57
MSH5-215ENST00000482280 LINC00308Q8TCZ7 52 aa11.45□□□□□ -0.58
MSH5-215ENST00000482280 A0A0U1RQV1 116 aa11.44□□□□□ -0.58
MSH5-215ENST00000482280 SPINK1P00995 79 aa11.44□□□□□ -0.58
MSH5-215ENST00000482280 MOBPQ13875 183 aa11.44□□□□□ -0.58
MSH5-215ENST00000482280 SCGB1D4Q6XE38 83 aa11.44□□□□□ -0.58
MSH5-215ENST00000482280 Q9BRP9 147 aa11.44□□□□□ -0.58
MSH5-215ENST00000482280 ERC2-IT1O76042 136 aa11.43□□□□□ -0.58
MSH5-215ENST00000482280 AKR1D1P51857 326 aa11.43□□□□□ -0.58
MSH5-215ENST00000482280 TPRXLQ17RH7 258 aa11.43□□□□□ -0.58
MSH5-215ENST00000482280 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
MSH5-215ENST00000482280 COPS9Q8WXC6 57 aa11.42□□□□□ -0.58
MSH5-215ENST00000482280 EIF4EBP3O60516 100 aaPredicted RBP11.41□□□□□ -0.58
MSH5-215ENST00000482280 SSBP3-AS1Q7Z2R9 100 aa11.41□□□□□ -0.58
MSH5-215ENST00000482280 LINC00518Q8N0U6 118 aa11.41□□□□□ -0.58
MSH5-215ENST00000482280 C9orf153Q5TBE3 101 aa11.4□□□□□ -0.58
MSH5-215ENST00000482280 FP248Q71RG6 208 aaPredicted RBP11.4□□□□□ -0.58
MSH5-215ENST00000482280 LITAFQ99732 161 aa11.4□□□□□ -0.58
MSH5-215ENST00000482280 SPANXDQ9BXN6 97 aa11.4□□□□□ -0.58
MSH5-215ENST00000482280 C5orf52A6NGY3 159 aa11.37□□□□□ -0.59
MSH5-215ENST00000482280 TTTY13Q9BZ97 58 aa11.37□□□□□ -0.59
MSH5-215ENST00000482280 DHRS4-AS1Q9P1J3 65 aa11.37□□□□□ -0.59
MSH5-215ENST00000482280 SLC25A34Q6PIV7 304 aa11.36□□□□□ -0.59
MSH5-215ENST00000482280 ATOH7Q8N100 152 aa11.33□□□□□ -0.6
MSH5-215ENST00000482280 IFITM1P13164 125 aa11.32□□□□□ -0.6
MSH5-215ENST00000482280 COX7BP24311 80 aa11.32□□□□□ -0.6
MSH5-215ENST00000482280 RPS29P62273 56 aaKnown RBP11.32□□□□□ -0.6
MSH5-215ENST00000482280 ST20-AS1Q8NBB2 130 aa11.32□□□□□ -0.6
MSH5-215ENST00000482280 S100A2P29034 98 aa11.31□□□□□ -0.6
MSH5-215ENST00000482280 Q6ZVH6 145 aa11.31□□□□□ -0.6
MSH5-215ENST00000482280 SLC25A20O43772 301 aa11.3□□□□□ -0.6
MSH5-215ENST00000482280 SNRPEP62304 92 aaKnown RBP11.3□□□□□ -0.6
MSH5-215ENST00000482280 C6orf99Q4VX62 202 aa11.3□□□□□ -0.6
MSH5-215ENST00000482280 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
MSH5-215ENST00000482280 A6NDN8 102 aa11.29□□□□□ -0.6
MSH5-215ENST00000482280 LAMTOR3Q9UHA4 124 aa11.29□□□□□ -0.6
MSH5-215ENST00000482280 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
MSH5-215ENST00000482280 ELOF1P60002 83 aaKnown RBP11.27□□□□□ -0.61
MSH5-215ENST00000482280 TAL2Q16559 108 aa11.27□□□□□ -0.61
MSH5-215ENST00000482280 Q8N377 158 aa11.25□□□□□ -0.61
MSH5-215ENST00000482280 TRBV7-6A0A0J9YX20 115 aa11.24□□□□□ -0.61
MSH5-215ENST00000482280 S100A6P06703 90 aa11.24□□□□□ -0.61
MSH5-215ENST00000482280 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
MSH5-215ENST00000482280 A0A1B0GWB2 263 aa11.23□□□□□ -0.61
MSH5-215ENST00000482280 SPRR1BP22528 89 aa11.23□□□□□ -0.61
MSH5-215ENST00000482280 S100A1P23297 94 aa11.23□□□□□ -0.61
MSH5-215ENST00000482280 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
MSH5-215ENST00000482280 DEFB105AQ8NG35 78 aa11.23□□□□□ -0.61
MSH5-215ENST00000482280 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
MSH5-215ENST00000482280 LIMD2Q9BT23 127 aa11.22□□□□□ -0.61
MSH5-215ENST00000482280 KRTAP13-3Q3SY46 172 aa11.21□□□□□ -0.61
MSH5-215ENST00000482280 HIST3H2BBQ8N257 126 aa11.2□□□□□ -0.62
MSH5-215ENST00000482280 TEX49A0A1B0GTD5 131 aa11.19□□□□□ -0.62
MSH5-215ENST00000482280 A4D1N5 150 aa11.19□□□□□ -0.62
MSH5-215ENST00000482280 HIST1H2BLQ99880 126 aa11.19□□□□□ -0.62
MSH5-215ENST00000482280 NHP2Q9NX24 153 aaKnown RBP11.19□□□□□ -0.62
MSH5-215ENST00000482280 HRCT1Q6UXD1 115 aa11.18□□□□□ -0.62
MSH5-215ENST00000482280 Q1RN00 199 aa11.17□□□□□ -0.62
MSH5-215ENST00000482280 PRO1933Q9H354 126 aa11.16□□□□□ -0.62
MSH5-215ENST00000482280 SEC61BP60468 96 aaKnown RBP11.15□□□□□ -0.62
MSH5-215ENST00000482280 VAMP3Q15836 100 aa11.15□□□□□ -0.62
MSH5-215ENST00000482280 SMIM11BQ8TCY0 68 aa11.12□□□□□ -0.63
MSH5-215ENST00000482280 MUC2Q02817 5179 aa11.11□□□□□ -0.63
MSH5-215ENST00000482280 H7C2G1 150 aa11.11□□□□□ -0.63
MSH5-215ENST00000482280 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
MSH5-215ENST00000482280 CD164Q04900 197 aa11.1□□□□□ -0.63
MSH5-215ENST00000482280 ASB16-AS1Q495Z4 193 aa11.09□□□□□ -0.63
MSH5-215ENST00000482280 IGLV5-48A0A075B6I7 105 aa11.07□□□□□ -0.64
MSH5-215ENST00000482280 F8WEM9 126 aa11.06□□□□□ -0.64
MSH5-215ENST00000482280 HIST1H4GQ99525 98 aa11.05□□□□□ -0.64
MSH5-215ENST00000482280 SMIM29Q86T20 159 aa11.02□□□□□ -0.65
MSH5-215ENST00000482280 LINC01547P58512 204 aaPredicted RBP11.01□□□□□ -0.65
MSH5-215ENST00000482280 hADV29S1A0JD25 119 aa11□□□□□ -0.65
MSH5-215ENST00000482280 XP32Q5T750 250 aa11□□□□□ -0.65
MSH5-215ENST00000482280 LINC00575Q6W349 94 aa11□□□□□ -0.65
MSH5-215ENST00000482280 BVES-AS1Q5T3Y7 98 aa10.98□□□□□ -0.65
MSH5-215ENST00000482280 C12orf57Q99622 126 aa10.98□□□□□ -0.65
MSH5-215ENST00000482280 TCL1BO95988 128 aa10.97□□□□□ -0.65
MSH5-215ENST00000482280 COX8AP10176 69 aa10.97□□□□□ -0.65
MSH5-215ENST00000482280 Q6ZQY7 126 aa10.97□□□□□ -0.65
MSH5-215ENST00000482280 C9orf92A6NGG3 77 aa10.96□□□□□ -0.65
MSH5-215ENST00000482280 Q5XG85 94 aa10.96□□□□□ -0.65
MSH5-215ENST00000482280 SNCGO76070 127 aa10.95□□□□□ -0.66
MSH5-215ENST00000482280 DLEU1O43261 78 aa10.93□□□□□ -0.66
MSH5-215ENST00000482280 A0A0G2JQZ4 141 aa10.92□□□□□ -0.66
MSH5-215ENST00000482280 LCE2AQ5TA79 106 aaPredicted RBP10.92□□□□□ -0.66
MSH5-215ENST00000482280 Q6JHZ5 121 aa10.92□□□□□ -0.66
MSH5-215ENST00000482280 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms