RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SPANXB1Q9NS25 103 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-224ENST00000481929 LAMTOR3Q9UHA4 124 aa7.75□□□□□ -1.17
HDAC6-224ENST00000481929 CHTOPQ9Y3Y2 248 aaKnown RBP7.74□□□□□ -1.17
HDAC6-224ENST00000481929 LCE2BO14633 110 aa7.73□□□□□ -1.17
HDAC6-224ENST00000481929 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
HDAC6-224ENST00000481929 HBDP02042 147 aa7.73□□□□□ -1.17
HDAC6-224ENST00000481929 Q5XG85 94 aa7.73□□□□□ -1.17
HDAC6-224ENST00000481929 SEC11CQ9BY50 192 aa7.73□□□□□ -1.17
HDAC6-224ENST00000481929 LOC107984156A0A0G2JMH3 177 aa7.72□□□□□ -1.17
HDAC6-224ENST00000481929 ARL17AQ8IVW1 177 aa7.72□□□□□ -1.17
HDAC6-224ENST00000481929 PRO1933Q9H354 126 aa7.71□□□□□ -1.18
HDAC6-224ENST00000481929 MYMXA0A1B0GTQ4 84 aa7.7□□□□□ -1.18
HDAC6-224ENST00000481929 APOC3P02656 99 aa7.7□□□□□ -1.18
HDAC6-224ENST00000481929 HINT1P49773 126 aaPredicted RBP7.7□□□□□ -1.18
HDAC6-224ENST00000481929 PMCHL1Q16048 86 aa7.7□□□□□ -1.18
HDAC6-224ENST00000481929 MIEN1Q9BRT3 115 aa7.7□□□□□ -1.18
HDAC6-224ENST00000481929 MT2AP02795 61 aa7.69□□□□□ -1.18
HDAC6-224ENST00000481929 SMIM29Q86T20 159 aa7.69□□□□□ -1.18
HDAC6-224ENST00000481929 LINC00846Q9NV44 126 aa7.69□□□□□ -1.18
HDAC6-224ENST00000481929 C20orf202A1L168 122 aa7.68□□□□□ -1.18
HDAC6-224ENST00000481929 FABP9Q0Z7S8 132 aa7.68□□□□□ -1.18
HDAC6-224ENST00000481929 NDUFC2O95298 119 aa7.67□□□□□ -1.18
HDAC6-224ENST00000481929 LINC00614P0C842 121 aa7.67□□□□□ -1.18
HDAC6-224ENST00000481929 Q1RN00 199 aa7.67□□□□□ -1.18
HDAC6-224ENST00000481929 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
HDAC6-224ENST00000481929 URB1-AS1Q96HZ7 61 aa7.67□□□□□ -1.18
HDAC6-224ENST00000481929 SVBPQ8N300 66 aa7.66□□□□□ -1.18
HDAC6-224ENST00000481929 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
HDAC6-224ENST00000481929 COX19Q49B96 90 aa7.65□□□□□ -1.18
HDAC6-224ENST00000481929 CBY1Q9Y3M2 126 aa7.65□□□□□ -1.18
HDAC6-224ENST00000481929 S100PP25815 95 aa7.64□□□□□ -1.19
HDAC6-224ENST00000481929 AKR1D1P51857 326 aa7.64□□□□□ -1.19
HDAC6-224ENST00000481929 TRAV12-1A0A0B4J245 112 aa7.63□□□□□ -1.19
HDAC6-224ENST00000481929 SNAPINO95295 136 aa7.63□□□□□ -1.19
HDAC6-224ENST00000481929 MT1FP04733 61 aa7.63□□□□□ -1.19
HDAC6-224ENST00000481929 KRTAP9-3Q9BYQ3 159 aa7.63□□□□□ -1.19
HDAC6-224ENST00000481929 TAL2Q16559 108 aa7.62□□□□□ -1.19
HDAC6-224ENST00000481929 C18orf32Q8TCD1 76 aa7.62□□□□□ -1.19
HDAC6-224ENST00000481929 Q75L30 129 aa7.61□□□□□ -1.19
HDAC6-224ENST00000481929 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
HDAC6-224ENST00000481929 RPS10P5Q9NQ39 176 aa7.61□□□□□ -1.19
HDAC6-224ENST00000481929 TCL1BO95988 128 aa7.6□□□□□ -1.19
HDAC6-224ENST00000481929 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
HDAC6-224ENST00000481929 RHEBQ15382 184 aa7.6□□□□□ -1.19
HDAC6-224ENST00000481929 KRTAP6-3Q3LI67 103 aa7.6□□□□□ -1.19
HDAC6-224ENST00000481929 KRTAP10-10P60014 251 aa7.59□□□□□ -1.19
HDAC6-224ENST00000481929 TRBV20-1A0A075B6N2 111 aa7.58□□□□□ -1.2
HDAC6-224ENST00000481929 A0A0G2JQZ4 141 aa7.58□□□□□ -1.2
HDAC6-224ENST00000481929 TEX49A0A1B0GTD5 131 aa7.58□□□□□ -1.2
HDAC6-224ENST00000481929 IFI27L1Q96BM0 104 aa7.58□□□□□ -1.2
HDAC6-224ENST00000481929 NPC2P61916 151 aa7.57□□□□□ -1.2
HDAC6-224ENST00000481929 KRTAP19-6Q3LI70 58 aa7.57□□□□□ -1.2
HDAC6-224ENST00000481929 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
HDAC6-224ENST00000481929 PCP2Q8IVA1 136 aa7.57□□□□□ -1.2
HDAC6-224ENST00000481929 LEPROTO15243 131 aa7.56□□□□□ -1.2
HDAC6-224ENST00000481929 OBSCN-AS1Q96MR7 158 aa7.56□□□□□ -1.2
HDAC6-224ENST00000481929 YPEL4Q96NS1 127 aa7.56□□□□□ -1.2
HDAC6-224ENST00000481929 COX7BP24311 80 aa7.55□□□□□ -1.2
HDAC6-224ENST00000481929 OR13C6PQ8NH95 151 aa7.55□□□□□ -1.2
HDAC6-224ENST00000481929 COLCA2A8K830 154 aa7.54□□□□□ -1.2
HDAC6-224ENST00000481929 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-224ENST00000481929 ELOF1P60002 83 aaKnown RBP7.54□□□□□ -1.2
HDAC6-224ENST00000481929 J3QQQ9 107 aa7.53□□□□□ -1.2
HDAC6-224ENST00000481929 NMUP48645 174 aa7.53□□□□□ -1.2
HDAC6-224ENST00000481929 TRAPPC1Q9Y5R8 145 aa7.52□□□□□ -1.21
HDAC6-224ENST00000481929 LGALS3P17931 250 aaKnown RBP7.5□□□□□ -1.21
HDAC6-224ENST00000481929 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
HDAC6-224ENST00000481929 H0Y8G0 127 aa7.49□□□□□ -1.21
HDAC6-224ENST00000481929 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
HDAC6-224ENST00000481929 C6orf99Q4VX62 202 aa7.49□□□□□ -1.21
HDAC6-224ENST00000481929 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
HDAC6-224ENST00000481929 SPANXCQ9NY87 97 aa7.49□□□□□ -1.21
HDAC6-224ENST00000481929 HERVK_113P61574 105 aa7.48□□□□□ -1.21
HDAC6-224ENST00000481929 SPANXDQ9BXN6 97 aa7.48□□□□□ -1.21
HDAC6-224ENST00000481929 IGLV5-48A0A075B6I7 105 aa7.47□□□□□ -1.21
HDAC6-224ENST00000481929 C20orf166-AS1Q96NR2 134 aa7.47□□□□□ -1.21
HDAC6-224ENST00000481929 CHCHD1Q96BP2 118 aaKnown RBP7.46□□□□□ -1.22
HDAC6-224ENST00000481929 Q96NJ1 140 aa7.46□□□□□ -1.22
HDAC6-224ENST00000481929 A0A0J9YXY3 114 aa7.45□□□□□ -1.22
HDAC6-224ENST00000481929 PLNP26678 52 aa7.45□□□□□ -1.22
HDAC6-224ENST00000481929 LINC00308Q8TCZ7 52 aa7.43□□□□□ -1.22
HDAC6-224ENST00000481929 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
HDAC6-224ENST00000481929 NEBP20929 6669 aa7.42□□□□□ -1.22
HDAC6-224ENST00000481929 IGFL1Q6UW32 110 aa7.41□□□□□ -1.22
HDAC6-224ENST00000481929 TMA7Q9Y2S6 64 aaKnown RBP7.41□□□□□ -1.22
HDAC6-224ENST00000481929 A0A1B0GWB2 263 aa7.4□□□□□ -1.22
HDAC6-224ENST00000481929 F8WEM9 126 aa7.4□□□□□ -1.22
HDAC6-224ENST00000481929 TRGC2P03986 189 aa7.4□□□□□ -1.22
HDAC6-224ENST00000481929 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
HDAC6-224ENST00000481929 A8MUU9 505 aa7.39□□□□□ -1.23
HDAC6-224ENST00000481929 HSBP1O75506 76 aa7.39□□□□□ -1.23
HDAC6-224ENST00000481929 DPM2O94777 84 aa7.39□□□□□ -1.23
HDAC6-224ENST00000481929 LINC00518Q8N0U6 118 aa7.39□□□□□ -1.23
HDAC6-224ENST00000481929 LITAFQ99732 161 aa7.37□□□□□ -1.23
HDAC6-224ENST00000481929 IGKCP01834 107 aa7.36□□□□□ -1.23
HDAC6-224ENST00000481929 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
HDAC6-224ENST00000481929 RBM12B-AS1Q9P1G2 102 aa7.36□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BKO60814 126 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 LEPROTL1O95214 131 aa7.35□□□□□ -1.23
HDAC6-224ENST00000481929 HIST1H2BJP06899 126 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms