RNA–Protein interactions for RNA: ENST00000481800.1

COL9A3-212, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-212ENST00000481800 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
COL9A3-212ENST00000481800 Q6ZRX8 168 aa10.17□□□□□ -0.78
COL9A3-212ENST00000481800 CBY1Q9Y3M2 126 aa10.17□□□□□ -0.78
COL9A3-212ENST00000481800 TIMM17BO60830 172 aa10.16□□□□□ -0.78
COL9A3-212ENST00000481800 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
COL9A3-212ENST00000481800 COA6Q5JTJ3 125 aaKnown RBP10.16□□□□□ -0.78
COL9A3-212ENST00000481800 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.78
COL9A3-212ENST00000481800 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
COL9A3-212ENST00000481800 HINT1P49773 126 aaPredicted RBP10.15□□□□□ -0.78
COL9A3-212ENST00000481800 Q8NBF4 154 aa10.15□□□□□ -0.78
COL9A3-212ENST00000481800 LINC00308Q8TCZ7 52 aa10.15□□□□□ -0.78
COL9A3-212ENST00000481800 Q9BRP9 147 aa10.15□□□□□ -0.78
COL9A3-212ENST00000481800 IGLV7-46A0A075B6I9 117 aa10.14□□□□□ -0.79
COL9A3-212ENST00000481800 C20orf202A1L168 122 aa10.14□□□□□ -0.79
COL9A3-212ENST00000481800 OR13C6PQ8NH95 151 aa10.14□□□□□ -0.79
COL9A3-212ENST00000481800 LITAFQ99732 161 aa10.14□□□□□ -0.79
COL9A3-212ENST00000481800 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
COL9A3-212ENST00000481800 IGLV9-49A0A0B4J1Y8 123 aa10.12□□□□□ -0.79
COL9A3-212ENST00000481800 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
COL9A3-212ENST00000481800 MOBPQ13875 183 aa10.1□□□□□ -0.79
COL9A3-212ENST00000481800 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
COL9A3-212ENST00000481800 SPINK1P00995 79 aa10.09□□□□□ -0.79
COL9A3-212ENST00000481800 TPRXLQ17RH7 258 aa10.09□□□□□ -0.79
COL9A3-212ENST00000481800 SCGB1D4Q6XE38 83 aa10.09□□□□□ -0.79
COL9A3-212ENST00000481800 SSBP3-AS1Q7Z2R9 100 aa10.08□□□□□ -0.8
COL9A3-212ENST00000481800 SPANXDQ9BXN6 97 aa10.08□□□□□ -0.8
COL9A3-212ENST00000481800 LINC00518Q8N0U6 118 aa10.07□□□□□ -0.8
COL9A3-212ENST00000481800 AKR1D1P51857 326 aa10.06□□□□□ -0.8
COL9A3-212ENST00000481800 FP248Q71RG6 208 aaPredicted RBP10.06□□□□□ -0.8
COL9A3-212ENST00000481800 COPS9Q8WXC6 57 aa10.06□□□□□ -0.8
COL9A3-212ENST00000481800 C5orf52A6NGY3 159 aa10.05□□□□□ -0.8
COL9A3-212ENST00000481800 ATOH7Q8N100 152 aa10.05□□□□□ -0.8
COL9A3-212ENST00000481800 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
COL9A3-212ENST00000481800 C9orf153Q5TBE3 101 aa10.04□□□□□ -0.8
COL9A3-212ENST00000481800 ST20-AS1Q8NBB2 130 aa10.04□□□□□ -0.8
COL9A3-212ENST00000481800 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
COL9A3-212ENST00000481800 A0A0U1RQV1 116 aa10.02□□□□□ -0.81
COL9A3-212ENST00000481800 IFITM1P13164 125 aa10.01□□□□□ -0.81
COL9A3-212ENST00000481800 COX7BP24311 80 aa10□□□□□ -0.81
COL9A3-212ENST00000481800 RPS29P62273 56 aaKnown RBP10□□□□□ -0.81
COL9A3-212ENST00000481800 C6orf99Q4VX62 202 aa10□□□□□ -0.81
COL9A3-212ENST00000481800 Q6ZVH6 145 aa10□□□□□ -0.81
COL9A3-212ENST00000481800 S100A2P29034 98 aa9.99□□□□□ -0.81
COL9A3-212ENST00000481800 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
COL9A3-212ENST00000481800 SLC25A34Q6PIV7 304 aa9.99□□□□□ -0.81
COL9A3-212ENST00000481800 ELOF1P60002 83 aaKnown RBP9.98□□□□□ -0.81
COL9A3-212ENST00000481800 PCP2Q8IVA1 136 aa9.98□□□□□ -0.81
COL9A3-212ENST00000481800 A6NDN8 102 aa9.97□□□□□ -0.81
COL9A3-212ENST00000481800 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
COL9A3-212ENST00000481800 MUC2Q02817 5179 aa9.97□□□□□ -0.81
COL9A3-212ENST00000481800 SLC25A20O43772 301 aa9.96□□□□□ -0.82
COL9A3-212ENST00000481800 SPRR1BP22528 89 aa9.96□□□□□ -0.82
COL9A3-212ENST00000481800 S100A1P23297 94 aa9.96□□□□□ -0.82
COL9A3-212ENST00000481800 Q8N377 158 aa9.96□□□□□ -0.82
COL9A3-212ENST00000481800 HIST3H2BBQ8N257 126 aa9.95□□□□□ -0.82
COL9A3-212ENST00000481800 LAMTOR3Q9UHA4 124 aa9.95□□□□□ -0.82
COL9A3-212ENST00000481800 HSBP1L1C9JCN9 74 aa9.94□□□□□ -0.82
COL9A3-212ENST00000481800 TAL2Q16559 108 aa9.94□□□□□ -0.82
COL9A3-212ENST00000481800 HIST1H2BLQ99880 126 aa9.94□□□□□ -0.82
COL9A3-212ENST00000481800 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
COL9A3-212ENST00000481800 KRTAP13-3Q3SY46 172 aa9.93□□□□□ -0.82
COL9A3-212ENST00000481800 DEFB105AQ8NG35 78 aa9.93□□□□□ -0.82
COL9A3-212ENST00000481800 A0A1B0GWB2 263 aa9.92□□□□□ -0.82
COL9A3-212ENST00000481800 S100A6P06703 90 aa9.92□□□□□ -0.82
COL9A3-212ENST00000481800 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
COL9A3-212ENST00000481800 TEX49A0A1B0GTD5 131 aa9.89□□□□□ -0.83
COL9A3-212ENST00000481800 Q1RN00 199 aa9.88□□□□□ -0.83
COL9A3-212ENST00000481800 HRCT1Q6UXD1 115 aa9.88□□□□□ -0.83
COL9A3-212ENST00000481800 A4D1N5 150 aa9.87□□□□□ -0.83
COL9A3-212ENST00000481800 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
COL9A3-212ENST00000481800 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
COL9A3-212ENST00000481800 NHP2Q9NX24 153 aaKnown RBP9.85□□□□□ -0.83
COL9A3-212ENST00000481800 PRO1933Q9H354 126 aa9.84□□□□□ -0.83
COL9A3-212ENST00000481800 MUC17Q685J3 4493 aa9.84□□□□□ -0.83
COL9A3-212ENST00000481800 VAMP3Q15836 100 aa9.83□□□□□ -0.84
COL9A3-212ENST00000481800 SCGB1D1O95968 90 aa9.82□□□□□ -0.84
COL9A3-212ENST00000481800 SEC61BP60468 96 aaKnown RBP9.81□□□□□ -0.84
COL9A3-212ENST00000481800 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
COL9A3-212ENST00000481800 IGLV5-48A0A075B6I7 105 aa9.8□□□□□ -0.84
COL9A3-212ENST00000481800 H7C2G1 150 aa9.8□□□□□ -0.84
COL9A3-212ENST00000481800 CD164Q04900 197 aa9.8□□□□□ -0.84
COL9A3-212ENST00000481800 SMIM29Q86T20 159 aa9.8□□□□□ -0.84
COL9A3-212ENST00000481800 LINC01547P58512 204 aaPredicted RBP9.79□□□□□ -0.84
COL9A3-212ENST00000481800 HIST1H4GQ99525 98 aa9.76□□□□□ -0.85
COL9A3-212ENST00000481800 F8WEM9 126 aa9.74□□□□□ -0.85
COL9A3-212ENST00000481800 XP32Q5T750 250 aa9.74□□□□□ -0.85
COL9A3-212ENST00000481800 LINC00575Q6W349 94 aa9.74□□□□□ -0.85
COL9A3-212ENST00000481800 COX8AP10176 69 aa9.73□□□□□ -0.85
COL9A3-212ENST00000481800 hADV29S1A0JD25 119 aa9.72□□□□□ -0.85
COL9A3-212ENST00000481800 C12orf57Q99622 126 aa9.72□□□□□ -0.85
COL9A3-212ENST00000481800 FAT4Q6V0I7 4981 aa9.72□□□□□ -0.85
COL9A3-212ENST00000481800 A0A0G2JQZ4 141 aa9.71□□□□□ -0.86
COL9A3-212ENST00000481800 Q5XG85 94 aa9.7□□□□□ -0.86
COL9A3-212ENST00000481800 Q6ZQY7 126 aa9.7□□□□□ -0.86
COL9A3-212ENST00000481800 C9orf92A6NGG3 77 aa9.69□□□□□ -0.86
COL9A3-212ENST00000481800 DLEU1O43261 78 aa9.69□□□□□ -0.86
COL9A3-212ENST00000481800 BVES-AS1Q5T3Y7 98 aa9.69□□□□□ -0.86
COL9A3-212ENST00000481800 LCE2AQ5TA79 106 aaPredicted RBP9.69□□□□□ -0.86
COL9A3-212ENST00000481800 C14orf144Q96I85 54 aa9.67□□□□□ -0.86
COL9A3-212ENST00000481800 TCL1BO95988 128 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms