RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 ARL17AQ8IVW1 177 aa2.39□□□□□ -2.03
VPS13D-208ENST00000481484 BOD1L2Q8IYS8 172 aa2.39□□□□□ -2.03
VPS13D-208ENST00000481484 MPLKIPQ8TAP9 179 aa2.39□□□□□ -2.03
VPS13D-208ENST00000481484 URB1-AS1Q96HZ7 61 aa2.39□□□□□ -2.03
VPS13D-208ENST00000481484 HSPB8Q9UJY1 196 aa2.39□□□□□ -2.03
VPS13D-208ENST00000481484 NCR3O14931 201 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 SCO1O75880 301 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 LEPROTL1O95214 131 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 NDUFC2O95298 119 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 SMIM13P0DJ93 91 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 PMCHL1Q16048 86 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 SLC25A34Q6PIV7 304 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 Q6ZRX8 168 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
VPS13D-208ENST00000481484 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 TRBV10-3A0A0K0K1G6 114 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 KRTAP4-16G5E9R7 235 aaPredicted RBP2.37□□□□□ -2.03
VPS13D-208ENST00000481484 J3QQQ9 107 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 LEPROTO15243 131 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 DPM2O94777 84 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 LGALS3P17931 250 aaKnown RBP2.37□□□□□ -2.03
VPS13D-208ENST00000481484 DDTP30046 118 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 SEC61BP60468 96 aaKnown RBP2.37□□□□□ -2.03
VPS13D-208ENST00000481484 C3orf22Q8N5N4 141 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 Q8NBF4 154 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 Q8NDZ9 215 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 YPEL4Q96NS1 127 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 RETNLBQ9BQ08 111 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 LIMD2Q9BT23 127 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 PPDPFQ9H3Y8 114 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 ANAPC11Q9NYG5 84 aa2.37□□□□□ -2.03
VPS13D-208ENST00000481484 SLC25A20O43772 301 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 IGKCP01834 107 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 HINT1P49773 126 aaPredicted RBP2.36□□□□□ -2.03
VPS13D-208ENST00000481484 ASB16-AS1Q495Z4 193 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 S100A7L2Q5SY68 101 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 SSBP3-AS1Q7Z2R9 100 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 DAND5Q8N907 189 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 SMCR5Q8TEV8 140 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 COPS9Q8WXC6 57 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 KRTAP2-2Q9BYT5 123 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 SPANXCQ9NY87 97 aa2.36□□□□□ -2.03
VPS13D-208ENST00000481484 IGKV2D-30A0A075B6S6 120 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 A0A0U1RRA0 63 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 H0Y8G0 127 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 ZNF73O43830 326 aaPredicted RBP2.35□□□□□ -2.03
VPS13D-208ENST00000481484 TIMM17BO60830 172 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 SERF1AO75920 110 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 AKR1D1P51857 326 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 MOBPQ13875 183 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 DHRS4-AS1Q9P1J3 65 aa2.35□□□□□ -2.03
VPS13D-208ENST00000481484 IGLV9-49A0A0B4J1Y8 123 aa2.34□□□□□ -2.03
VPS13D-208ENST00000481484 E9PLD3 99 aa2.34□□□□□ -2.03
VPS13D-208ENST00000481484 TRGC2P03986 189 aa2.34□□□□□ -2.03
VPS13D-208ENST00000481484 C9orf153Q5TBE3 101 aa2.34□□□□□ -2.03
VPS13D-208ENST00000481484 GAGE2AQ6NT46 116 aa2.34□□□□□ -2.03
VPS13D-208ENST00000481484 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
VPS13D-208ENST00000481484 A0A0J9YXY3 114 aa2.33□□□□□ -2.04
VPS13D-208ENST00000481484 C20orf202A1L168 122 aa2.33□□□□□ -2.04
VPS13D-208ENST00000481484 SPRR1BP22528 89 aa2.33□□□□□ -2.04
VPS13D-208ENST00000481484 LINC01547P58512 204 aaPredicted RBP2.33□□□□□ -2.04
VPS13D-208ENST00000481484 LINC00518Q8N0U6 118 aa2.33□□□□□ -2.04
VPS13D-208ENST00000481484 Q8N377 158 aa2.33□□□□□ -2.04
VPS13D-208ENST00000481484 Q9BRP9 147 aa2.33□□□□□ -2.04
VPS13D-208ENST00000481484 TRBV7-6A0A0J9YX20 115 aa2.32□□□□□ -2.04
VPS13D-208ENST00000481484 ELOF1P60002 83 aaKnown RBP2.32□□□□□ -2.04
VPS13D-208ENST00000481484 CD164Q04900 197 aa2.32□□□□□ -2.04
VPS13D-208ENST00000481484 LINC01545Q5VT33 79 aa2.32□□□□□ -2.04
VPS13D-208ENST00000481484 PET117Q6UWS5 81 aa2.32□□□□□ -2.04
VPS13D-208ENST00000481484 Q6ZVH6 145 aa2.32□□□□□ -2.04
VPS13D-208ENST00000481484 NHP2Q9NX24 153 aaKnown RBP2.32□□□□□ -2.04
VPS13D-208ENST00000481484 LAMTOR3Q9UHA4 124 aa2.32□□□□□ -2.04
VPS13D-208ENST00000481484 A0A1B0GWB2 263 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 A4D1N5 150 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 ZNF815PA8K554 130 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 SYS1-DBNDD2H3BUS1 97 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 ERC2-IT1O76042 136 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 IFITM1P13164 125 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 FABP4P15090 132 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 Q5XG85 94 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 SOSTDC1Q6X4U4 206 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 LINC00308Q8TCZ7 52 aa2.31□□□□□ -2.04
VPS13D-208ENST00000481484 COX7BP24311 80 aa2.3□□□□□ -2.04
VPS13D-208ENST00000481484 SCGB1D4Q6XE38 83 aa2.3□□□□□ -2.04
VPS13D-208ENST00000481484 OR13C6PQ8NH95 151 aa2.3□□□□□ -2.04
VPS13D-208ENST00000481484 LITAFQ99732 161 aa2.3□□□□□ -2.04
VPS13D-208ENST00000481484 PMCHL2Q9BQD1 86 aa2.3□□□□□ -2.04
VPS13D-208ENST00000481484 PRO1933Q9H354 126 aa2.3□□□□□ -2.04
VPS13D-208ENST00000481484 FLGP20930 4061 aaPredicted RBP2.29□□□□□ -2.04
VPS13D-208ENST00000481484 IGLV5-48A0A075B6I7 105 aa2.29□□□□□ -2.04
VPS13D-208ENST00000481484 TEX49A0A1B0GTD5 131 aa2.29□□□□□ -2.04
VPS13D-208ENST00000481484 COLCA2A8K830 154 aa2.29□□□□□ -2.04
VPS13D-208ENST00000481484 H7C2G1 150 aa2.29□□□□□ -2.04
VPS13D-208ENST00000481484 HIST1H2BKO60814 126 aa2.29□□□□□ -2.04
VPS13D-208ENST00000481484 HIST1H2BJP06899 126 aa2.29□□□□□ -2.04
VPS13D-208ENST00000481484 CFC1BP0CG36 223 aa2.29□□□□□ -2.04
VPS13D-208ENST00000481484 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms