RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 SYCNQ0VAF6 134 aa12.02□□□□□ -0.48
MRPL28-209ENST00000481453 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.02□□□□□ -0.48
MRPL28-209ENST00000481453 M0R2N4 97 aa12.02□□□□□ -0.49
MRPL28-209ENST00000481453 ELOF1P60002 83 aaKnown RBP12.02□□□□□ -0.49
MRPL28-209ENST00000481453 KRTAP1-5Q9BYS1 174 aa12.02□□□□□ -0.49
MRPL28-209ENST00000481453 M0R378 163 aa12.01□□□□□ -0.49
MRPL28-209ENST00000481453 PDE6GP18545 87 aa12.01□□□□□ -0.49
MRPL28-209ENST00000481453 TRBV7-6A0A0J9YX20 115 aa12□□□□□ -0.49
MRPL28-209ENST00000481453 RMI2Q96E14 147 aa12□□□□□ -0.49
MRPL28-209ENST00000481453 Q6ZRP5 223 aa11.99□□□□□ -0.49
MRPL28-209ENST00000481453 GHRHP01286 108 aa11.99□□□□□ -0.49
MRPL28-209ENST00000481453 CYSTM1Q9H1C7 97 aa11.96□□□□□ -0.49
MRPL28-209ENST00000481453 LYSTQ99698 3801 aa11.96□□□□□ -0.5
MRPL28-209ENST00000481453 HAMPP81172 84 aa11.95□□□□□ -0.5
MRPL28-209ENST00000481453 Q6ZVQ6 151 aa11.95□□□□□ -0.5
MRPL28-209ENST00000481453 LINC01547P58512 204 aaPredicted RBP11.95□□□□□ -0.5
MRPL28-209ENST00000481453 CSMD3Q7Z407 3707 aa11.95□□□□□ -0.5
MRPL28-209ENST00000481453 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
MRPL28-209ENST00000481453 PRKDCP78527 4128 aaKnown RBP11.94□□□□□ -0.5
MRPL28-209ENST00000481453 TRBV7-4A0A0J9YYF1 115 aa11.94□□□□□ -0.5
MRPL28-209ENST00000481453 TLX1NBP0CAT3 122 aa11.93□□□□□ -0.5
MRPL28-209ENST00000481453 DNHD1Q96M86 4753 aa11.93□□□□□ -0.5
MRPL28-209ENST00000481453 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
MRPL28-209ENST00000481453 NUPR2A6NF83 97 aa11.91□□□□□ -0.5
MRPL28-209ENST00000481453 MEGF8Q7Z7M0 2845 aa11.88□□□□□ -0.51
MRPL28-209ENST00000481453 CXCL6P80162 114 aa11.87□□□□□ -0.51
MRPL28-209ENST00000481453 NKAPP1Q8N9T2 125 aa11.87□□□□□ -0.51
MRPL28-209ENST00000481453 TMEM258P61165 79 aa11.87□□□□□ -0.51
MRPL28-209ENST00000481453 SERTAD4-AS1Q5TG53 156 aa11.87□□□□□ -0.51
MRPL28-209ENST00000481453 PLECQ15149 4684 aaKnown RBP11.86□□□□□ -0.51
MRPL28-209ENST00000481453 DNAH7Q8WXX0 4024 aa11.86□□□□□ -0.51
MRPL28-209ENST00000481453 DNAH10Q8IVF4 4471 aa11.84□□□□□ -0.51
MRPL28-209ENST00000481453 J3KT08 172 aa11.84□□□□□ -0.51
MRPL28-209ENST00000481453 KCNQ1DNQ9H478 68 aa11.84□□□□□ -0.51
MRPL28-209ENST00000481453 LOC107984640A0A0U1RRK4 108 aa11.83□□□□□ -0.52
MRPL28-209ENST00000481453 PLA2G2DQ9UNK4 145 aa11.83□□□□□ -0.52
MRPL28-209ENST00000481453 C7orf33Q8WU49 177 aa11.83□□□□□ -0.52
MRPL28-209ENST00000481453 BCE1O60756 84 aa11.82□□□□□ -0.52
MRPL28-209ENST00000481453 FAM168BA1KXE4 195 aa11.82□□□□□ -0.52
MRPL28-209ENST00000481453 RPS28P62857 69 aaKnown RBP11.82□□□□□ -0.52
MRPL28-209ENST00000481453 SCXQ7RTU7 201 aa11.82□□□□□ -0.52
MRPL28-209ENST00000481453 KRTAP7-1Q8IUC3 87 aa11.82□□□□□ -0.52
MRPL28-209ENST00000481453 STARD9Q9P2P6 4700 aa11.81□□□□□ -0.52
MRPL28-209ENST00000481453 NBDYA0A0U1RRE5 68 aa11.8□□□□□ -0.52
MRPL28-209ENST00000481453 C20orf197Q8N268 126 aa11.8□□□□□ -0.52
MRPL28-209ENST00000481453 PSCAO43653 123 aa11.8□□□□□ -0.52
MRPL28-209ENST00000481453 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
MRPL28-209ENST00000481453 IGLV5-37A0A075B6J1 123 aa11.79□□□□□ -0.52
MRPL28-209ENST00000481453 TRAV7A0A075B6U4 112 aa11.79□□□□□ -0.52
MRPL28-209ENST00000481453 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
MRPL28-209ENST00000481453 CNBPP62633 177 aaKnown RBP11.79□□□□□ -0.52
MRPL28-209ENST00000481453 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
MRPL28-209ENST00000481453 RPL37AP8A6NKH3 93 aa11.76□□□□□ -0.53
MRPL28-209ENST00000481453 Q6ZRN7 208 aaPredicted RBP11.75□□□□□ -0.53
MRPL28-209ENST00000481453 Q8N377 158 aa11.75□□□□□ -0.53
MRPL28-209ENST00000481453 LRCOL1A6NCL2 159 aa11.74□□□□□ -0.53
MRPL28-209ENST00000481453 KRTAP21-3Q3LHN1 58 aa11.74□□□□□ -0.53
MRPL28-209ENST00000481453 VPS13DQ5THJ4 4388 aa11.74□□□□□ -0.53
MRPL28-209ENST00000481453 DHRS4-AS1Q9P1J3 65 aa11.73□□□□□ -0.53
MRPL28-209ENST00000481453 Q6ZRX8 168 aa11.72□□□□□ -0.53
MRPL28-209ENST00000481453 A0A096LNI7 61 aa11.72□□□□□ -0.53
MRPL28-209ENST00000481453 NREPQ16612 68 aa11.72□□□□□ -0.53
MRPL28-209ENST00000481453 FAM19A5Q7Z5A7 132 aaPredicted RBP11.72□□□□□ -0.53
MRPL28-209ENST00000481453 IGLV1-50A0A075B6I6 118 aa11.71□□□□□ -0.53
MRPL28-209ENST00000481453 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.71□□□□□ -0.53
MRPL28-209ENST00000481453 C14orf177Q52M58 125 aa11.71□□□□□ -0.53
MRPL28-209ENST00000481453 ETDCA0A1B0GVM5 59 aa11.71□□□□□ -0.54
MRPL28-209ENST00000481453 PRYO14603 147 aa11.71□□□□□ -0.54
MRPL28-209ENST00000481453 C3orf84H3BNL1 204 aa11.7□□□□□ -0.54
MRPL28-209ENST00000481453 C16orf90A8MZG2 172 aa11.7□□□□□ -0.54
MRPL28-209ENST00000481453 KRTAP4-16G5E9R7 235 aaPredicted RBP11.7□□□□□ -0.54
MRPL28-209ENST00000481453 Q9BRP9 147 aa11.7□□□□□ -0.54
MRPL28-209ENST00000481453 IGLV5-48A0A075B6I7 105 aa11.69□□□□□ -0.54
MRPL28-209ENST00000481453 MRPL55Q7Z7F7 128 aaKnown RBP11.68□□□□□ -0.54
MRPL28-209ENST00000481453 SPRR1AP35321 89 aa11.68□□□□□ -0.54
MRPL28-209ENST00000481453 Q8N9L7 120 aa11.68□□□□□ -0.54
MRPL28-209ENST00000481453 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
MRPL28-209ENST00000481453 KLKP1Q107X0 134 aa11.66□□□□□ -0.54
MRPL28-209ENST00000481453 BPY2O14599 106 aa11.65□□□□□ -0.54
MRPL28-209ENST00000481453 SNURFQ9Y675 71 aa11.65□□□□□ -0.54
MRPL28-209ENST00000481453 FBN3Q75N90 2809 aa11.65□□□□□ -0.54
MRPL28-209ENST00000481453 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
MRPL28-209ENST00000481453 H7BZZ5 65 aa11.64□□□□□ -0.55
MRPL28-209ENST00000481453 IGKV4-1P06312 121 aa11.64□□□□□ -0.55
MRPL28-209ENST00000481453 FUSP35637 526 aaKnown RBP eCLIP11.64□□□□□ -0.55
MRPL28-209ENST00000481453 ST20-AS1Q8NBB2 130 aa11.64□□□□□ -0.55
MRPL28-209ENST00000481453 FAM236DA0A1B0GTK5 79 aa11.63□□□□□ -0.55
MRPL28-209ENST00000481453 OXTP01178 125 aa11.63□□□□□ -0.55
MRPL28-209ENST00000481453 FAM236CP0DP71 79 aa11.63□□□□□ -0.55
MRPL28-209ENST00000481453 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
MRPL28-209ENST00000481453 Q6ZR54 194 aa11.62□□□□□ -0.55
MRPL28-209ENST00000481453 CHTF8P0CG12 524 aa11.61□□□□□ -0.55
MRPL28-209ENST00000481453 C1orf137Q5JT78 98 aa11.61□□□□□ -0.55
MRPL28-209ENST00000481453 UBE2BP63146 152 aa11.6□□□□□ -0.55
MRPL28-209ENST00000481453 A0A1W2PNM2 257 aa11.6□□□□□ -0.55
MRPL28-209ENST00000481453 ERC2-IT1O76042 136 aa11.6□□□□□ -0.55
MRPL28-209ENST00000481453 TNP2Q05952 138 aa11.6□□□□□ -0.55
MRPL28-209ENST00000481453 A0A1B0GW54 56 aa11.59□□□□□ -0.55
MRPL28-209ENST00000481453 REG3GQ6UW15 175 aa11.58□□□□□ -0.56
MRPL28-209ENST00000481453 F8WEM9 126 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms