RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 COX17Q14061 63 aa11.22□□□□□ -0.61
SH3D21-203ENST00000480549 C6orf223Q8N319 242 aa11.22□□□□□ -0.61
SH3D21-203ENST00000480549 MDFIQ99750 246 aa11.21□□□□□ -0.61
SH3D21-203ENST00000480549 KRTAP26-1Q6PEX3 210 aa11.21□□□□□ -0.62
SH3D21-203ENST00000480549 TMEM256-PLSCR3K7ERE1 68 aa11.2□□□□□ -0.62
SH3D21-203ENST00000480549 C9orf116Q5BN46 136 aaPredicted RBP11.2□□□□□ -0.62
SH3D21-203ENST00000480549 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
SH3D21-203ENST00000480549 LRCOL1A6NCL2 159 aa11.19□□□□□ -0.62
SH3D21-203ENST00000480549 TRBV7-4A0A0J9YYF1 115 aa11.18□□□□□ -0.62
SH3D21-203ENST00000480549 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
SH3D21-203ENST00000480549 Q8N814 137 aa11.18□□□□□ -0.62
SH3D21-203ENST00000480549 LINC01556Q5JQF7 62 aa11.18□□□□□ -0.62
SH3D21-203ENST00000480549 Q6ZVQ6 151 aa11.18□□□□□ -0.62
SH3D21-203ENST00000480549 TMEM254Q8TBM7 123 aa11.18□□□□□ -0.62
SH3D21-203ENST00000480549 PRR15Q8IV56 129 aa11.16□□□□□ -0.62
SH3D21-203ENST00000480549 NREPQ16612 68 aa11.16□□□□□ -0.62
SH3D21-203ENST00000480549 PRR3P79522 188 aaKnown RBP11.15□□□□□ -0.62
SH3D21-203ENST00000480549 DNAH9Q9NYC9 4486 aa11.15□□□□□ -0.63
SH3D21-203ENST00000480549 MGAM2Q2M2H8 2515 aa11.14□□□□□ -0.63
SH3D21-203ENST00000480549 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
SH3D21-203ENST00000480549 FUSP35637 526 aaKnown RBP eCLIP11.14□□□□□ -0.63
SH3D21-203ENST00000480549 Q6ZQT0 140 aa11.14□□□□□ -0.63
SH3D21-203ENST00000480549 DNAH1Q9P2D7 4330 aa11.13□□□□□ -0.63
SH3D21-203ENST00000480549 DNAH10OSP0CZ25 163 aa11.13□□□□□ -0.63
SH3D21-203ENST00000480549 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
SH3D21-203ENST00000480549 Q8NDZ9 215 aa11.13□□□□□ -0.63
SH3D21-203ENST00000480549 LINC00167Q96N53 147 aa11.12□□□□□ -0.63
SH3D21-203ENST00000480549 LINC00588Q9Y4M8 146 aa11.12□□□□□ -0.63
SH3D21-203ENST00000480549 C6orf48Q9UBA6 75 aa11.12□□□□□ -0.63
SH3D21-203ENST00000480549 Q6ZRU5 148 aa11.11□□□□□ -0.63
SH3D21-203ENST00000480549 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
SH3D21-203ENST00000480549 MUC7Q8TAX7 377 aa11.11□□□□□ -0.63
SH3D21-203ENST00000480549 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
SH3D21-203ENST00000480549 HIGD2BQ4VC39 106 aa11.1□□□□□ -0.63
SH3D21-203ENST00000480549 BPY2O14599 106 aa11.09□□□□□ -0.63
SH3D21-203ENST00000480549 PRYO14603 147 aa11.09□□□□□ -0.63
SH3D21-203ENST00000480549 CD164Q04900 197 aa11.09□□□□□ -0.63
SH3D21-203ENST00000480549 PSPHP1O15172 72 aa11.08□□□□□ -0.64
SH3D21-203ENST00000480549 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
SH3D21-203ENST00000480549 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
SH3D21-203ENST00000480549 CXCL6P80162 114 aa11.06□□□□□ -0.64
SH3D21-203ENST00000480549 CAMK2N2Q96S95 79 aa11.05□□□□□ -0.64
SH3D21-203ENST00000480549 Q8N9L7 120 aa11.05□□□□□ -0.64
SH3D21-203ENST00000480549 HIGD2AQ9BW72 106 aa11.05□□□□□ -0.64
SH3D21-203ENST00000480549 C6orf99Q4VX62 202 aa11.04□□□□□ -0.64
SH3D21-203ENST00000480549 DYNC2H1Q8NCM8 4307 aaKnown RBP11.03□□□□□ -0.64
SH3D21-203ENST00000480549 Q6ZRP5 223 aa11.02□□□□□ -0.65
SH3D21-203ENST00000480549 LOC110117498A0A087WWA1 95 aa11.02□□□□□ -0.65
SH3D21-203ENST00000480549 LYSTQ99698 3801 aa11.01□□□□□ -0.65
SH3D21-203ENST00000480549 MRPL55Q7Z7F7 128 aaKnown RBP11.01□□□□□ -0.65
SH3D21-203ENST00000480549 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
SH3D21-203ENST00000480549 XAGE1AQ9HD64 81 aa11□□□□□ -0.65
SH3D21-203ENST00000480549 A8MU10 97 aa10.98□□□□□ -0.65
SH3D21-203ENST00000480549 STAB2Q8WWQ8 2551 aa10.98□□□□□ -0.65
SH3D21-203ENST00000480549 IGLV6-57P01721 117 aa10.98□□□□□ -0.65
SH3D21-203ENST00000480549 hDV103S1A0JD37 113 aa10.97□□□□□ -0.65
SH3D21-203ENST00000480549 CASC10Q5T4H9 136 aa10.97□□□□□ -0.65
SH3D21-203ENST00000480549 ERC2-IT1O76042 136 aa10.96□□□□□ -0.65
SH3D21-203ENST00000480549 LINC00575Q6W349 94 aa10.96□□□□□ -0.65
SH3D21-203ENST00000480549 SYCNQ0VAF6 134 aa10.95□□□□□ -0.66
SH3D21-203ENST00000480549 CSMD3Q7Z407 3707 aa10.94□□□□□ -0.66
SH3D21-203ENST00000480549 VPREB1P12018 145 aa10.94□□□□□ -0.66
SH3D21-203ENST00000480549 Q1T7F1 81 aa10.94□□□□□ -0.66
SH3D21-203ENST00000480549 Q6ZQY7 126 aa10.94□□□□□ -0.66
SH3D21-203ENST00000480549 C1orf64Q8NEQ6 169 aa10.93□□□□□ -0.66
SH3D21-203ENST00000480549 TRAV22A0A0B4J277 110 aa10.93□□□□□ -0.66
SH3D21-203ENST00000480549 OCR1Q9BZK8 76 aa10.93□□□□□ -0.66
SH3D21-203ENST00000480549 APLNQ9ULZ1 77 aa10.93□□□□□ -0.66
SH3D21-203ENST00000480549 RBM12B-AS1Q9P1G2 102 aa10.91□□□□□ -0.66
SH3D21-203ENST00000480549 PRR4Q16378 134 aa10.91□□□□□ -0.66
SH3D21-203ENST00000480549 KRTAP1-5Q9BYS1 174 aa10.9□□□□□ -0.66
SH3D21-203ENST00000480549 DNAH10Q8IVF4 4471 aa10.9□□□□□ -0.66
SH3D21-203ENST00000480549 DNAH7Q8WXX0 4024 aa10.89□□□□□ -0.67
SH3D21-203ENST00000480549 A8MUN3 132 aa10.89□□□□□ -0.67
SH3D21-203ENST00000480549 PDE6GP18545 87 aa10.89□□□□□ -0.67
SH3D21-203ENST00000480549 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
SH3D21-203ENST00000480549 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.89□□□□□ -0.67
SH3D21-203ENST00000480549 PLECQ15149 4684 aaKnown RBP10.88□□□□□ -0.67
SH3D21-203ENST00000480549 PRKDCP78527 4128 aaKnown RBP10.88□□□□□ -0.67
SH3D21-203ENST00000480549 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
SH3D21-203ENST00000480549 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
SH3D21-203ENST00000480549 M0R378 163 aa10.86□□□□□ -0.67
SH3D21-203ENST00000480549 DNHD1Q96M86 4753 aa10.85□□□□□ -0.67
SH3D21-203ENST00000480549 SPTSSBQ8NFR3 76 aa10.84□□□□□ -0.67
SH3D21-203ENST00000480549 DIRC1Q969H9 104 aa10.83□□□□□ -0.68
SH3D21-203ENST00000480549 ZNF73O43830 326 aaPredicted RBP10.83□□□□□ -0.68
SH3D21-203ENST00000480549 UBE2DNLQ8IWF7 75 aa10.83□□□□□ -0.68
SH3D21-203ENST00000480549 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
SH3D21-203ENST00000480549 KTN1-AS1Q86SY8 53 aa10.82□□□□□ -0.68
SH3D21-203ENST00000480549 STARD9Q9P2P6 4700 aa10.8□□□□□ -0.68
SH3D21-203ENST00000480549 ELOF1P60002 83 aaKnown RBP10.8□□□□□ -0.68
SH3D21-203ENST00000480549 SMIM29Q86T20 159 aa10.79□□□□□ -0.68
SH3D21-203ENST00000480549 PLA2G2DQ9UNK4 145 aa10.79□□□□□ -0.68
SH3D21-203ENST00000480549 C4orf48Q5BLP8 95 aa10.79□□□□□ -0.68
SH3D21-203ENST00000480549 NUPR2A6NF83 97 aa10.79□□□□□ -0.68
SH3D21-203ENST00000480549 UBE2BP63146 152 aa10.79□□□□□ -0.68
SH3D21-203ENST00000480549 COX7BP24311 80 aa10.78□□□□□ -0.68
SH3D21-203ENST00000480549 C3orf84H3BNL1 204 aa10.77□□□□□ -0.68
SH3D21-203ENST00000480549 MEGF8Q7Z7M0 2845 aa10.77□□□□□ -0.69
SH3D21-203ENST00000480549 CHKB-CPT1BH3BT56 60 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms