RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 LEPROTO15243 131 aa5.45□□□□□ -1.54
CMTM1-208ENST00000479381 TSPAN13O95857 204 aa5.45□□□□□ -1.54
CMTM1-208ENST00000479381 PRR4Q16378 134 aa5.45□□□□□ -1.54
CMTM1-208ENST00000479381 PYY3Q5JQD4 70 aa5.45□□□□□ -1.54
CMTM1-208ENST00000479381 LINC01545Q5VT33 79 aa5.45□□□□□ -1.54
CMTM1-208ENST00000479381 TMEM126AQ9H061 195 aa5.45□□□□□ -1.54
CMTM1-208ENST00000479381 HMCN2Q8NDA2 5059 aa5.44□□□□□ -1.54
CMTM1-208ENST00000479381 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
CMTM1-208ENST00000479381 ETDCA0A1B0GVM5 59 aa5.44□□□□□ -1.54
CMTM1-208ENST00000479381 J3QQQ9 107 aa5.44□□□□□ -1.54
CMTM1-208ENST00000479381 HSBP1L1C9JCN9 74 aa5.43□□□□□ -1.54
CMTM1-208ENST00000479381 KRTAP1-4P0C5Y4 121 aa5.43□□□□□ -1.54
CMTM1-208ENST00000479381 NPC2P61916 151 aa5.43□□□□□ -1.54
CMTM1-208ENST00000479381 DAND5Q8N907 189 aa5.43□□□□□ -1.54
CMTM1-208ENST00000479381 ANAPC11Q9NYG5 84 aa5.43□□□□□ -1.54
CMTM1-208ENST00000479381 NMUP48645 174 aa5.42□□□□□ -1.54
CMTM1-208ENST00000479381 S100A7L2Q5SY68 101 aa5.42□□□□□ -1.54
CMTM1-208ENST00000479381 LINC00518Q8N0U6 118 aa5.42□□□□□ -1.54
CMTM1-208ENST00000479381 PRYO14603 147 aa5.41□□□□□ -1.54
CMTM1-208ENST00000479381 TSPEAR-AS2P59090 65 aa5.41□□□□□ -1.54
CMTM1-208ENST00000479381 C12orf57Q99622 126 aa5.41□□□□□ -1.54
CMTM1-208ENST00000479381 ZNF706Q9Y5V0 76 aaPredicted RBP5.41□□□□□ -1.54
CMTM1-208ENST00000479381 A0A087X002 238 aa5.4□□□□□ -1.54
CMTM1-208ENST00000479381 Q8NDZ9 215 aa5.4□□□□□ -1.54
CMTM1-208ENST00000479381 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
CMTM1-208ENST00000479381 TRBV10-3A0A0K0K1G6 114 aa5.39□□□□□ -1.55
CMTM1-208ENST00000479381 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
CMTM1-208ENST00000479381 DDTP30046 118 aa5.39□□□□□ -1.55
CMTM1-208ENST00000479381 ATOH7Q8N100 152 aa5.39□□□□□ -1.55
CMTM1-208ENST00000479381 LINC00304Q8N9R0 145 aa5.38□□□□□ -1.55
CMTM1-208ENST00000479381 OR13C6PQ8NH95 151 aa5.38□□□□□ -1.55
CMTM1-208ENST00000479381 PPDPFQ9H3Y8 114 aa5.38□□□□□ -1.55
CMTM1-208ENST00000479381 ZNF815PA8K554 130 aa5.37□□□□□ -1.55
CMTM1-208ENST00000479381 E9PLD3 99 aa5.37□□□□□ -1.55
CMTM1-208ENST00000479381 HINT1P49773 126 aaPredicted RBP5.37□□□□□ -1.55
CMTM1-208ENST00000479381 FAM229BQ4G0N7 80 aa5.37□□□□□ -1.55
CMTM1-208ENST00000479381 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
CMTM1-208ENST00000479381 SPANXB1Q9NS25 103 aaPredicted RBP5.37□□□□□ -1.55
CMTM1-208ENST00000479381 PAM16Q9Y3D7 125 aa5.37□□□□□ -1.55
CMTM1-208ENST00000479381 A0A0J9YXY3 114 aa5.36□□□□□ -1.55
CMTM1-208ENST00000479381 SPATA45Q537H7 98 aa5.36□□□□□ -1.55
CMTM1-208ENST00000479381 SCGB1D4Q6XE38 83 aa5.36□□□□□ -1.55
CMTM1-208ENST00000479381 SMCR5Q8TEV8 140 aa5.36□□□□□ -1.55
CMTM1-208ENST00000479381 TRAV23DV6A0A075B6W5 121 aa5.35□□□□□ -1.55
CMTM1-208ENST00000479381 TSTD3H0UI37 97 aa5.35□□□□□ -1.55
CMTM1-208ENST00000479381 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
CMTM1-208ENST00000479381 LINC00337Q8N6G1 96 aa5.35□□□□□ -1.55
CMTM1-208ENST00000479381 CBY1Q9Y3M2 126 aa5.35□□□□□ -1.55
CMTM1-208ENST00000479381 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
CMTM1-208ENST00000479381 TRBV10-2A0A0K0K1G8 114 aa5.34□□□□□ -1.55
CMTM1-208ENST00000479381 C3orf22Q8N5N4 141 aa5.34□□□□□ -1.55
CMTM1-208ENST00000479381 SPRR4Q96PI1 79 aa5.34□□□□□ -1.55
CMTM1-208ENST00000479381 KCNQ1DNQ9H478 68 aa5.34□□□□□ -1.55
CMTM1-208ENST00000479381 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
CMTM1-208ENST00000479381 NDUFC2O95298 119 aa5.33□□□□□ -1.56
CMTM1-208ENST00000479381 KRTAP13-2Q52LG2 175 aa5.33□□□□□ -1.56
CMTM1-208ENST00000479381 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
CMTM1-208ENST00000479381 UQCR10Q9UDW1 63 aa5.33□□□□□ -1.56
CMTM1-208ENST00000479381 COX8AP10176 69 aa5.32□□□□□ -1.56
CMTM1-208ENST00000479381 C9orf153Q5TBE3 101 aa5.32□□□□□ -1.56
CMTM1-208ENST00000479381 SLC25A34Q6PIV7 304 aa5.32□□□□□ -1.56
CMTM1-208ENST00000479381 B5MCH6 92 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 ADAMTSL4-AS1Q5T5F5 129 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 LINC00308Q8TCZ7 52 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 COPS9Q8WXC6 57 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 C14orf144Q96I85 54 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 TTTY13Q9BZ97 58 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 PRO1933Q9H354 126 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 SPANXCQ9NY87 97 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 LRP2P98164 4655 aa5.31□□□□□ -1.56
CMTM1-208ENST00000479381 DLEU1O43261 78 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 ZNF73O43830 326 aaPredicted RBP5.3□□□□□ -1.56
CMTM1-208ENST00000479381 TIMM17BO60830 172 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 SPRR1AP35321 89 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 CTAG1AP78358 180 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 MOBPQ13875 183 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 SPAG11AQ6PDA7 123 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 SOSTDC1Q6X4U4 206 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 Q8NBF4 154 aa5.3□□□□□ -1.56
CMTM1-208ENST00000479381 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
CMTM1-208ENST00000479381 Q6ZRX8 168 aa5.29□□□□□ -1.56
CMTM1-208ENST00000479381 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
CMTM1-208ENST00000479381 A6NDN8 102 aa5.28□□□□□ -1.56
CMTM1-208ENST00000479381 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
CMTM1-208ENST00000479381 PCP2Q8IVA1 136 aa5.28□□□□□ -1.56
CMTM1-208ENST00000479381 IGLV7-46A0A075B6I9 117 aa5.27□□□□□ -1.57
CMTM1-208ENST00000479381 PCP4L1A6NKN8 68 aa5.27□□□□□ -1.57
CMTM1-208ENST00000479381 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
CMTM1-208ENST00000479381 SPANXDQ9BXN6 97 aa5.27□□□□□ -1.57
CMTM1-208ENST00000479381 LPAP08519 4548 aa5.26□□□□□ -1.57
CMTM1-208ENST00000479381 KRTAP4-16G5E9R7 235 aaPredicted RBP5.26□□□□□ -1.57
CMTM1-208ENST00000479381 COX7BP24311 80 aa5.26□□□□□ -1.57
CMTM1-208ENST00000479381 Q9BRP9 147 aa5.26□□□□□ -1.57
CMTM1-208ENST00000479381 HIGD1BQ9P298 99 aa5.26□□□□□ -1.57
CMTM1-208ENST00000479381 TAL2Q16559 108 aa5.25□□□□□ -1.57
CMTM1-208ENST00000479381 C6orf99Q4VX62 202 aa5.25□□□□□ -1.57
CMTM1-208ENST00000479381 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
CMTM1-208ENST00000479381 LITAFQ99732 161 aa5.25□□□□□ -1.57
CMTM1-208ENST00000479381 IFITM1P13164 125 aa5.24□□□□□ -1.57
CMTM1-208ENST00000479381 ST20-AS1Q8NBB2 130 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms