RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 A0A087WVE0 104 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 CRYM-AS1A6NIL9 109 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 HMGN3Q15651 99 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 PMCHL1Q16048 86 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 DEFB110Q30KQ9 67 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 SFTA2Q6UW10 78 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 SVBPQ8N300 66 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 DPH3P1Q9H4G8 78 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 CUX1P39880 1505 aa-0.9□□□□□ -2.55
HPS3-205ENST00000478525 SAMD9Q5K651 1589 aa-0.91□□□□□ -2.55
HPS3-205ENST00000478525 MBD5Q9P267 1494 aa-0.91□□□□□ -2.55
HPS3-205ENST00000478525 H0YAA0 97 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 MPC2O95563 127 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 PRLHP81277 87 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 DEFB107AQ8IZN7 70 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 UBE2D4Q9Y2X8 147 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 S4R3F8 94 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 CUL7Q14999 1698 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 TLN2Q9Y4G6 2542 aa-0.91□□□□□ -2.56
HPS3-205ENST00000478525 LRRC9Q6ZRR7 1453 aa-0.92□□□□□ -2.56
HPS3-205ENST00000478525 ABCA3Q99758 1704 aa-0.92□□□□□ -2.56
HPS3-205ENST00000478525 FAM135AQ9P2D6 1515 aa-0.92□□□□□ -2.56
HPS3-205ENST00000478525 IER3IP1Q9Y5U9 82 aa-0.92□□□□□ -2.56
HPS3-205ENST00000478525 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.92□□□□□ -2.56
HPS3-205ENST00000478525 CHD7Q9P2D1 2997 aa-0.92□□□□□ -2.56
HPS3-205ENST00000478525 NRKQ7Z2Y5 1582 aa-0.92□□□□□ -2.56
HPS3-205ENST00000478525 RELNP78509 3460 aa-0.92□□□□□ -2.56
HPS3-205ENST00000478525 ARHGAP5Q13017 1502 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 TRBV25-1A0A075B6N4 114 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 OOSP1A8MZH6 123 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 MT1HL1P0DM35 61 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 CCDC58Q4VC31 144 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 LELP1Q5T871 98 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 PLXNC1O60486 1568 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 ITPR2Q14571 2701 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 ABCC10Q5T3U5 1492 aa-0.93□□□□□ -2.56
HPS3-205ENST00000478525 NALCNQ8IZF0 1738 aa-0.94□□□□□ -2.56
HPS3-205ENST00000478525 GNG7O60262 68 aa-0.94□□□□□ -2.56
HPS3-205ENST00000478525 UQCRHP07919 91 aa-0.94□□□□□ -2.56
HPS3-205ENST00000478525 MT1XP80297 61 aa-0.94□□□□□ -2.56
HPS3-205ENST00000478525 PRO3102Q9H379 93 aa-0.94□□□□□ -2.56
HPS3-205ENST00000478525 RAPGEF2Q9Y4G8 1499 aa-0.94□□□□□ -2.56
HPS3-205ENST00000478525 MAGI3Q5TCQ9 1506 aa-0.94□□□□□ -2.56
HPS3-205ENST00000478525 CEP295Q9C0D2 2601 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 LRBAP50851 2863 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 DEPDC5O75140 1603 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 TMEM218A2RU14 115 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 NDUFA3O95167 84 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 COX7BP24311 80 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 SARNPP82979 210 aaKnown RBP-0.95□□□□□ -2.56
HPS3-205ENST00000478525 ZNF720Q7Z2F6 126 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 TSC22D3Q99576 134 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 MYOM2P54296 1465 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 MAGI2Q86UL8 1455 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 TRIOO75962 3097 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 MYO9AB2RTY4 2548 aa-0.95□□□□□ -2.56
HPS3-205ENST00000478525 SRCAPQ6ZRS2 3230 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 D6R8Y8 96 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 SNAPC5O75971 98 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 GNG4P50150 75 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 HSD52Q0P140 79 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 MUSTN1Q8IVN3 82 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 CACFD1Q9UGQ2 172 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 SPHKAPQ2M3C7 1700 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 SUPT6HQ7KZ85 1726 aaKnown RBP-0.96□□□□□ -2.56
HPS3-205ENST00000478525 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.96□□□□□ -2.56
HPS3-205ENST00000478525 LTN1O94822 1766 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 EIF4G3O43432 1585 aaKnown RBP-0.96□□□□□ -2.56
HPS3-205ENST00000478525 EYSQ5T1H1 3165 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 ANKRD36BQ8N2N9 1353 aa-0.96□□□□□ -2.56
HPS3-205ENST00000478525 CLTCQ00610 1675 aaKnown RBP-0.97□□□□□ -2.56
HPS3-205ENST00000478525 C5orf42Q9H799 3197 aa-0.97□□□□□ -2.56
HPS3-205ENST00000478525 MLH3Q9UHC1 1453 aa-0.97□□□□□ -2.56
HPS3-205ENST00000478525 KRTAP19-5Q3LI72 72 aa-0.97□□□□□ -2.56
HPS3-205ENST00000478525 CLPSL2Q6UWE3 100 aa-0.97□□□□□ -2.56
HPS3-205ENST00000478525 NESP48681 1621 aa-0.97□□□□□ -2.57
HPS3-205ENST00000478525 WIZO95785 1651 aa-0.97□□□□□ -2.57
HPS3-205ENST00000478525 UNC13AQ9UPW8 1703 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 SCN11AQ9UI33 1791 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 K7EP13 123 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 LEPROTL1O95214 131 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 IGLC2P0DOY2 106 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 IGLC3P0DOY3 106 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 LINC00158P58513 81 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 PPP3R1P63098 170 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 ETDBQ3ZM63 59 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 SERP2Q8N6R1 65 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 TRGV9Q99603 122 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 CFAP46Q8IYW2 2715 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 TRRAPQ9Y4A5 3859 aa-0.98□□□□□ -2.57
HPS3-205ENST00000478525 CYB5AP00167 134 aa-0.99□□□□□ -2.57
HPS3-205ENST00000478525 MRPS10P82664 201 aaKnown RBP-0.99□□□□□ -2.57
HPS3-205ENST00000478525 THOC2Q8NI27 1593 aaKnown RBP-1□□□□□ -2.57
HPS3-205ENST00000478525 USP32Q8NFA0 1604 aa-1□□□□□ -2.57
HPS3-205ENST00000478525 A0A1B0GUT8 65 aa-1□□□□□ -2.57
HPS3-205ENST00000478525 hADV29S1A0JD25 119 aa-1□□□□□ -2.57
HPS3-205ENST00000478525 SMIM11AP58511 58 aa-1□□□□□ -2.57
HPS3-205ENST00000478525 GAFA1Q96PS6 74 aa-1□□□□□ -2.57
HPS3-205ENST00000478525 TIMM8BQ9Y5J9 83 aaPredicted RBP-1□□□□□ -2.57
HPS3-205ENST00000478525 BPTFQ12830 3046 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms