RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 S100A7L2Q5SY68 101 aa6.27□□□□□ -1.41
VANGL1-206ENST00000478369 SPRR4Q96PI1 79 aa6.27□□□□□ -1.41
VANGL1-206ENST00000478369 TMA7Q9Y2S6 64 aaKnown RBP6.27□□□□□ -1.41
VANGL1-206ENST00000478369 C3orf22Q8N5N4 141 aa6.26□□□□□ -1.41
VANGL1-206ENST00000478369 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
VANGL1-206ENST00000478369 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
VANGL1-206ENST00000478369 LOC105371267A0A1B0GV96 52 aa6.25□□□□□ -1.41
VANGL1-206ENST00000478369 S100A2P29034 98 aa6.25□□□□□ -1.41
VANGL1-206ENST00000478369 HIST3H2BBQ8N257 126 aa6.25□□□□□ -1.41
VANGL1-206ENST00000478369 RETNLBQ9BQ08 111 aa6.25□□□□□ -1.41
VANGL1-206ENST00000478369 SPANXCQ9NY87 97 aa6.25□□□□□ -1.41
VANGL1-206ENST00000478369 IGLV7-46A0A075B6I9 117 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 TRAV23DV6A0A075B6W5 121 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 B5MCH6 92 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 S100A6P06703 90 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 SNRPEP62304 92 aaKnown RBP6.24□□□□□ -1.41
VANGL1-206ENST00000478369 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 C4orf48Q5BLP8 95 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 ATOH7Q8N100 152 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 SMCR5Q8TEV8 140 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 HIST1H2BLQ99880 126 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 CBY1Q9Y3M2 126 aa6.24□□□□□ -1.41
VANGL1-206ENST00000478369 SCGB1D4Q6XE38 83 aa6.23□□□□□ -1.41
VANGL1-206ENST00000478369 FP248Q71RG6 208 aaPredicted RBP6.23□□□□□ -1.41
VANGL1-206ENST00000478369 SPANXDQ9BXN6 97 aa6.23□□□□□ -1.41
VANGL1-206ENST00000478369 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
VANGL1-206ENST00000478369 ZNF73O43830 326 aaPredicted RBP6.22□□□□□ -1.41
VANGL1-206ENST00000478369 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
VANGL1-206ENST00000478369 Q6ZRX8 168 aa6.22□□□□□ -1.41
VANGL1-206ENST00000478369 JOSD1Q15040 202 aaPredicted RBP6.21□□□□□ -1.42
VANGL1-206ENST00000478369 Q6ZVH6 145 aa6.21□□□□□ -1.42
VANGL1-206ENST00000478369 LINC00518Q8N0U6 118 aa6.21□□□□□ -1.42
VANGL1-206ENST00000478369 COPS9Q8WXC6 57 aa6.21□□□□□ -1.42
VANGL1-206ENST00000478369 SPINK1P00995 79 aa6.2□□□□□ -1.42
VANGL1-206ENST00000478369 IFITM1P13164 125 aa6.2□□□□□ -1.42
VANGL1-206ENST00000478369 HINT1P49773 126 aaPredicted RBP6.2□□□□□ -1.42
VANGL1-206ENST00000478369 PCP2Q8IVA1 136 aa6.2□□□□□ -1.42
VANGL1-206ENST00000478369 OR13C6PQ8NH95 151 aa6.2□□□□□ -1.42
VANGL1-206ENST00000478369 Q9BRP9 147 aa6.2□□□□□ -1.42
VANGL1-206ENST00000478369 PPDPFQ9H3Y8 114 aa6.2□□□□□ -1.42
VANGL1-206ENST00000478369 ERC2-IT1O76042 136 aa6.19□□□□□ -1.42
VANGL1-206ENST00000478369 Q8NBF4 154 aa6.19□□□□□ -1.42
VANGL1-206ENST00000478369 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
VANGL1-206ENST00000478369 RPS29P62273 56 aaKnown RBP6.18□□□□□ -1.42
VANGL1-206ENST00000478369 GAGE2AQ6NT46 116 aa6.18□□□□□ -1.42
VANGL1-206ENST00000478369 SSBP3-AS1Q7Z2R9 100 aa6.18□□□□□ -1.42
VANGL1-206ENST00000478369 C5orf52A6NGY3 159 aa6.16□□□□□ -1.42
VANGL1-206ENST00000478369 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
VANGL1-206ENST00000478369 MUC17Q685J3 4493 aa6.15□□□□□ -1.42
VANGL1-206ENST00000478369 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
VANGL1-206ENST00000478369 MOBPQ13875 183 aa6.14□□□□□ -1.43
VANGL1-206ENST00000478369 DHRS4-AS1Q9P1J3 65 aa6.14□□□□□ -1.43
VANGL1-206ENST00000478369 IGLV9-49A0A0B4J1Y8 123 aa6.13□□□□□ -1.43
VANGL1-206ENST00000478369 A6NDN8 102 aa6.13□□□□□ -1.43
VANGL1-206ENST00000478369 SCGB1D1O95968 90 aa6.13□□□□□ -1.43
VANGL1-206ENST00000478369 COX7BP24311 80 aa6.13□□□□□ -1.43
VANGL1-206ENST00000478369 ELOF1P60002 83 aaKnown RBP6.13□□□□□ -1.43
VANGL1-206ENST00000478369 KRTAP13-3Q3SY46 172 aa6.13□□□□□ -1.43
VANGL1-206ENST00000478369 C6orf99Q4VX62 202 aa6.13□□□□□ -1.43
VANGL1-206ENST00000478369 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
VANGL1-206ENST00000478369 TRAV13-2A0A0B4J235 113 aa6.12□□□□□ -1.43
VANGL1-206ENST00000478369 TRBV7-6A0A0J9YX20 115 aa6.12□□□□□ -1.43
VANGL1-206ENST00000478369 ST20-AS1Q8NBB2 130 aa6.12□□□□□ -1.43
VANGL1-206ENST00000478369 SLC25A20O43772 301 aa6.11□□□□□ -1.43
VANGL1-206ENST00000478369 Q8N377 158 aa6.11□□□□□ -1.43
VANGL1-206ENST00000478369 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
VANGL1-206ENST00000478369 SPRR1BP22528 89 aa6.1□□□□□ -1.43
VANGL1-206ENST00000478369 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
VANGL1-206ENST00000478369 COX8AP10176 69 aa6.09□□□□□ -1.43
VANGL1-206ENST00000478369 SLC25A34Q6PIV7 304 aa6.09□□□□□ -1.43
VANGL1-206ENST00000478369 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
VANGL1-206ENST00000478369 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
VANGL1-206ENST00000478369 A4D1N5 150 aa6.08□□□□□ -1.44
VANGL1-206ENST00000478369 DLEU1O43261 78 aa6.08□□□□□ -1.44
VANGL1-206ENST00000478369 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
VANGL1-206ENST00000478369 C9orf153Q5TBE3 101 aa6.08□□□□□ -1.44
VANGL1-206ENST00000478369 SMIM11BQ8TCY0 68 aa6.08□□□□□ -1.44
VANGL1-206ENST00000478369 TAL2Q16559 108 aa6.07□□□□□ -1.44
VANGL1-206ENST00000478369 HIST1H4GQ99525 98 aa6.06□□□□□ -1.44
VANGL1-206ENST00000478369 LAMTOR3Q9UHA4 124 aa6.06□□□□□ -1.44
VANGL1-206ENST00000478369 TEX49A0A1B0GTD5 131 aa6.05□□□□□ -1.44
VANGL1-206ENST00000478369 NHP2Q9NX24 153 aaKnown RBP6.05□□□□□ -1.44
VANGL1-206ENST00000478369 SMIM6P0DI80 62 aa6.04□□□□□ -1.44
VANGL1-206ENST00000478369 VAMP3Q15836 100 aa6.04□□□□□ -1.44
VANGL1-206ENST00000478369 DEFB105AQ8NG35 78 aa6.04□□□□□ -1.44
VANGL1-206ENST00000478369 LIMD2Q9BT23 127 aa6.04□□□□□ -1.44
VANGL1-206ENST00000478369 PAM16Q9Y3D7 125 aa6.04□□□□□ -1.44
VANGL1-206ENST00000478369 IGLV5-48A0A075B6I7 105 aa6.03□□□□□ -1.44
VANGL1-206ENST00000478369 SPATA45Q537H7 98 aa6.03□□□□□ -1.44
VANGL1-206ENST00000478369 XP32Q5T750 250 aa6.03□□□□□ -1.44
VANGL1-206ENST00000478369 C14orf144Q96I85 54 aa6.03□□□□□ -1.44
VANGL1-206ENST00000478369 VAMP8Q9BV40 100 aa6.03□□□□□ -1.44
VANGL1-206ENST00000478369 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
VANGL1-206ENST00000478369 LINC01547P58512 204 aaPredicted RBP6.02□□□□□ -1.45
VANGL1-206ENST00000478369 Q1RN00 199 aa6.02□□□□□ -1.45
VANGL1-206ENST00000478369 HIGD1BQ9P298 99 aa6.02□□□□□ -1.45
VANGL1-206ENST00000478369 SMIM29Q86T20 159 aa6.01□□□□□ -1.45
VANGL1-206ENST00000478369 C12orf57Q99622 126 aa6.01□□□□□ -1.45
VANGL1-206ENST00000478369 CD164Q04900 197 aa6□□□□□ -1.45
VANGL1-206ENST00000478369 LINC00575Q6W349 94 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms