RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 NBDYA0A0U1RRE5 68 aa8.04□□□□□ -1.12
TRAF3IP3-213ENST00000478359 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
TRAF3IP3-213ENST00000478359 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
TRAF3IP3-213ENST00000478359 SMCR5Q8TEV8 140 aa8.04□□□□□ -1.12
TRAF3IP3-213ENST00000478359 DNAH1Q9P2D7 4330 aa8.04□□□□□ -1.12
TRAF3IP3-213ENST00000478359 DNHD1Q96M86 4753 aa8.03□□□□□ -1.12
TRAF3IP3-213ENST00000478359 SPRR1AP35321 89 aa8.03□□□□□ -1.12
TRAF3IP3-213ENST00000478359 Q6ZQT0 140 aa8.02□□□□□ -1.12
TRAF3IP3-213ENST00000478359 LINC00846Q9NV44 126 aa8.02□□□□□ -1.12
TRAF3IP3-213ENST00000478359 ETDCA0A1B0GVM5 59 aa8.02□□□□□ -1.13
TRAF3IP3-213ENST00000478359 Q6JHZ5 121 aa8.02□□□□□ -1.13
TRAF3IP3-213ENST00000478359 Q6ZRX8 168 aa8.02□□□□□ -1.13
TRAF3IP3-213ENST00000478359 COL7A1Q02388 2944 aa8.01□□□□□ -1.13
TRAF3IP3-213ENST00000478359 ATP5EP2Q5VTU8 51 aa8.01□□□□□ -1.13
TRAF3IP3-213ENST00000478359 FAM168BA1KXE4 195 aa8□□□□□ -1.13
TRAF3IP3-213ENST00000478359 KRTAP4-16G5E9R7 235 aaPredicted RBP8□□□□□ -1.13
TRAF3IP3-213ENST00000478359 NDUFV3P56181 108 aaKnown RBP8□□□□□ -1.13
TRAF3IP3-213ENST00000478359 UBL5Q9BZL1 73 aa8□□□□□ -1.13
TRAF3IP3-213ENST00000478359 B5MCH6 92 aa8□□□□□ -1.13
TRAF3IP3-213ENST00000478359 FAM19A5Q7Z5A7 132 aaPredicted RBP8□□□□□ -1.13
TRAF3IP3-213ENST00000478359 ANAPC13Q9BS18 74 aa8□□□□□ -1.13
TRAF3IP3-213ENST00000478359 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
TRAF3IP3-213ENST00000478359 STAB2Q8WWQ8 2551 aa7.99□□□□□ -1.13
TRAF3IP3-213ENST00000478359 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
TRAF3IP3-213ENST00000478359 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
TRAF3IP3-213ENST00000478359 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
TRAF3IP3-213ENST00000478359 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
TRAF3IP3-213ENST00000478359 A0A096LNI7 61 aa7.98□□□□□ -1.13
TRAF3IP3-213ENST00000478359 REG3GQ6UW15 175 aa7.98□□□□□ -1.13
TRAF3IP3-213ENST00000478359 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
TRAF3IP3-213ENST00000478359 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
TRAF3IP3-213ENST00000478359 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.14
TRAF3IP3-213ENST00000478359 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.95□□□□□ -1.14
TRAF3IP3-213ENST00000478359 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
TRAF3IP3-213ENST00000478359 A0A1B0GW54 56 aa7.94□□□□□ -1.14
TRAF3IP3-213ENST00000478359 IGLV5-48A0A075B6I7 105 aa7.93□□□□□ -1.14
TRAF3IP3-213ENST00000478359 Q9BRP9 147 aa7.93□□□□□ -1.14
TRAF3IP3-213ENST00000478359 FAM236AA0A1B0GUQ0 79 aa7.92□□□□□ -1.14
TRAF3IP3-213ENST00000478359 FAM236BA0A1B0GV22 79 aa7.92□□□□□ -1.14
TRAF3IP3-213ENST00000478359 UBE2BP63146 152 aa7.92□□□□□ -1.14
TRAF3IP3-213ENST00000478359 Q8N377 158 aa7.92□□□□□ -1.14
TRAF3IP3-213ENST00000478359 A0A1W2PNN7 141 aa7.9□□□□□ -1.14
TRAF3IP3-213ENST00000478359 LINC01547P58512 204 aaPredicted RBP7.9□□□□□ -1.14
TRAF3IP3-213ENST00000478359 IGKV3D-7A0A0C4DH55 119 aa7.89□□□□□ -1.15
TRAF3IP3-213ENST00000478359 DEFB105AQ8NG35 78 aa7.89□□□□□ -1.15
TRAF3IP3-213ENST00000478359 H0Y9J4 135 aa7.89□□□□□ -1.15
TRAF3IP3-213ENST00000478359 MEGF8Q7Z7M0 2845 aa7.88□□□□□ -1.15
TRAF3IP3-213ENST00000478359 HIST1H4AP62805 103 aaKnown RBP7.88□□□□□ -1.15
TRAF3IP3-213ENST00000478359 CSMD3Q7Z407 3707 aa7.88□□□□□ -1.15
TRAF3IP3-213ENST00000478359 ATOX1O00244 68 aa7.87□□□□□ -1.15
TRAF3IP3-213ENST00000478359 CXCL6P80162 114 aa7.87□□□□□ -1.15
TRAF3IP3-213ENST00000478359 Q6ZR54 194 aa7.87□□□□□ -1.15
TRAF3IP3-213ENST00000478359 Q6ZVQ6 151 aa7.87□□□□□ -1.15
TRAF3IP3-213ENST00000478359 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
TRAF3IP3-213ENST00000478359 LYSTQ99698 3801 aa7.87□□□□□ -1.15
TRAF3IP3-213ENST00000478359 A0A087WTM6 91 aa7.87□□□□□ -1.15
TRAF3IP3-213ENST00000478359 M0R2N4 97 aa7.86□□□□□ -1.15
TRAF3IP3-213ENST00000478359 FUSP35637 526 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRAF3IP3-213ENST00000478359 TNP2Q05952 138 aa7.85□□□□□ -1.15
TRAF3IP3-213ENST00000478359 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
TRAF3IP3-213ENST00000478359 F8WEM9 126 aa7.84□□□□□ -1.15
TRAF3IP3-213ENST00000478359 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
TRAF3IP3-213ENST00000478359 ERC2-IT1O76042 136 aa7.83□□□□□ -1.16
TRAF3IP3-213ENST00000478359 HAMPP81172 84 aa7.83□□□□□ -1.16
TRAF3IP3-213ENST00000478359 PHF5AQ7RTV0 110 aaKnown RBP7.83□□□□□ -1.16
TRAF3IP3-213ENST00000478359 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
TRAF3IP3-213ENST00000478359 DNAH7Q8WXX0 4024 aa7.83□□□□□ -1.16
TRAF3IP3-213ENST00000478359 EPM2AB3EWF7 344 aa7.83□□□□□ -1.16
TRAF3IP3-213ENST00000478359 C1orf137Q5JT78 98 aa7.83□□□□□ -1.16
TRAF3IP3-213ENST00000478359 C1orf134Q5TEV5 83 aa7.82□□□□□ -1.16
TRAF3IP3-213ENST00000478359 SPACA4Q8TDM5 124 aa7.82□□□□□ -1.16
TRAF3IP3-213ENST00000478359 DPH3Q96FX2 82 aa7.82□□□□□ -1.16
TRAF3IP3-213ENST00000478359 DNAH10Q8IVF4 4471 aa7.81□□□□□ -1.16
TRAF3IP3-213ENST00000478359 PRLHP81277 87 aa7.81□□□□□ -1.16
TRAF3IP3-213ENST00000478359 NREPQ16612 68 aa7.81□□□□□ -1.16
TRAF3IP3-213ENST00000478359 HIGD2AQ9BW72 106 aa7.81□□□□□ -1.16
TRAF3IP3-213ENST00000478359 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
TRAF3IP3-213ENST00000478359 UQCRQO14949 82 aa7.8□□□□□ -1.16
TRAF3IP3-213ENST00000478359 BCE1O60756 84 aa7.8□□□□□ -1.16
TRAF3IP3-213ENST00000478359 WWC2-AS2Q96NR7 200 aa7.8□□□□□ -1.16
TRAF3IP3-213ENST00000478359 FBN3Q75N90 2809 aa7.8□□□□□ -1.16
TRAF3IP3-213ENST00000478359 STARD9Q9P2P6 4700 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 A0A087WVE0 104 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 RTL8CO15255 209 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 UBE2AP49459 152 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 Q8NBF4 154 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 SMIM29Q86T20 159 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 SPRR4Q96PI1 79 aa7.79□□□□□ -1.16
TRAF3IP3-213ENST00000478359 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
TRAF3IP3-213ENST00000478359 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
TRAF3IP3-213ENST00000478359 COX7CP15954 63 aa7.78□□□□□ -1.16
TRAF3IP3-213ENST00000478359 SPRR1BP22528 89 aa7.78□□□□□ -1.16
TRAF3IP3-213ENST00000478359 CCDC179H3BU77 68 aa7.77□□□□□ -1.17
TRAF3IP3-213ENST00000478359 LY6G6CO95867 125 aa7.77□□□□□ -1.17
TRAF3IP3-213ENST00000478359 A0A1W2PNM2 257 aa7.76□□□□□ -1.17
TRAF3IP3-213ENST00000478359 SMIM20Q8N5G0 67 aa7.76□□□□□ -1.17
TRAF3IP3-213ENST00000478359 SERP2Q8N6R1 65 aa7.76□□□□□ -1.17
TRAF3IP3-213ENST00000478359 TENM2Q9NT68 2774 aa7.75□□□□□ -1.17
TRAF3IP3-213ENST00000478359 LINC00476Q8WZB0 136 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms