RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 LINC00575Q6W349 94 aa7.95□□□□□ -1.14
SGSM3-209ENST00000478085 LINC00167Q96N53 147 aa7.95□□□□□ -1.14
SGSM3-209ENST00000478085 CSMD1Q96PZ7 3565 aa7.94□□□□□ -1.14
SGSM3-209ENST00000478085 UPK3BQ9BT76 320 aa7.94□□□□□ -1.14
SGSM3-209ENST00000478085 SPINK6Q6UWN8 80 aa7.94□□□□□ -1.14
SGSM3-209ENST00000478085 C1orf137Q5JT78 98 aa7.93□□□□□ -1.14
SGSM3-209ENST00000478085 C20orf197Q8N268 126 aa7.93□□□□□ -1.14
SGSM3-209ENST00000478085 LINC01600Q96MT4 127 aa7.93□□□□□ -1.14
SGSM3-209ENST00000478085 WWC2-AS2Q96NR7 200 aa7.93□□□□□ -1.14
SGSM3-209ENST00000478085 CHTF8P0CG12 524 aa7.93□□□□□ -1.14
SGSM3-209ENST00000478085 Q6ZRP5 223 aa7.93□□□□□ -1.14
SGSM3-209ENST00000478085 WIPF1O43516 503 aa7.92□□□□□ -1.14
SGSM3-209ENST00000478085 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
SGSM3-209ENST00000478085 BSNQ9UPA5 3926 aa7.92□□□□□ -1.14
SGSM3-209ENST00000478085 KIAA0087Q14695 138 aa7.92□□□□□ -1.14
SGSM3-209ENST00000478085 STAB2Q8WWQ8 2551 aa7.91□□□□□ -1.14
SGSM3-209ENST00000478085 CUBNO60494 3623 aa7.91□□□□□ -1.14
SGSM3-209ENST00000478085 GVQW2A0A096LPI5 108 aaPredicted RBP7.9□□□□□ -1.14
SGSM3-209ENST00000478085 CELSR1Q9NYQ6 3014 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 CRYGAP11844 174 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 CSMD2Q7Z408 3487 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 FAM236DA0A1B0GTK5 79 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 PRYO14603 147 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 FAM236CP0DP71 79 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 FAM19A3Q7Z5A8 133 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 LINC00846Q9NV44 126 aa7.89□□□□□ -1.15
SGSM3-209ENST00000478085 A0A087WVE0 104 aa7.88□□□□□ -1.15
SGSM3-209ENST00000478085 PHF5AQ7RTV0 110 aaKnown RBP7.88□□□□□ -1.15
SGSM3-209ENST00000478085 ZNF706Q9Y5V0 76 aaPredicted RBP7.88□□□□□ -1.15
SGSM3-209ENST00000478085 FAM168BA1KXE4 195 aa7.87□□□□□ -1.15
SGSM3-209ENST00000478085 SMCR5Q8TEV8 140 aa7.87□□□□□ -1.15
SGSM3-209ENST00000478085 CASC10Q5T4H9 136 aa7.87□□□□□ -1.15
SGSM3-209ENST00000478085 C15orf56Q8N910 161 aa7.87□□□□□ -1.15
SGSM3-209ENST00000478085 Q9BRP9 147 aa7.86□□□□□ -1.15
SGSM3-209ENST00000478085 RPS28P62857 69 aaKnown RBP7.86□□□□□ -1.15
SGSM3-209ENST00000478085 RTL8CO15255 209 aa7.85□□□□□ -1.15
SGSM3-209ENST00000478085 CIRBP-AS1Q8TBR5 109 aa7.84□□□□□ -1.15
SGSM3-209ENST00000478085 FAM104AQ969W3 186 aa7.84□□□□□ -1.15
SGSM3-209ENST00000478085 VPREB1P12018 145 aa7.84□□□□□ -1.15
SGSM3-209ENST00000478085 C16orf90A8MZG2 172 aa7.83□□□□□ -1.16
SGSM3-209ENST00000478085 SERTAD4-AS1Q5TG53 156 aa7.83□□□□□ -1.16
SGSM3-209ENST00000478085 WFDC13Q8IUB5 93 aa7.83□□□□□ -1.16
SGSM3-209ENST00000478085 MP68P56378 58 aa7.83□□□□□ -1.16
SGSM3-209ENST00000478085 APLNQ9ULZ1 77 aa7.83□□□□□ -1.16
SGSM3-209ENST00000478085 NDUFC1O43677 76 aa7.82□□□□□ -1.16
SGSM3-209ENST00000478085 DEFB116Q30KQ4 102 aa7.82□□□□□ -1.16
SGSM3-209ENST00000478085 TRAV7A0A075B6U4 112 aa7.82□□□□□ -1.16
SGSM3-209ENST00000478085 A0A087WSZ3 146 aa7.82□□□□□ -1.16
SGSM3-209ENST00000478085 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
SGSM3-209ENST00000478085 ST20-AS1Q8NBB2 130 aa7.79□□□□□ -1.16
SGSM3-209ENST00000478085 ATP5EP56381 51 aaPredicted RBP7.78□□□□□ -1.16
SGSM3-209ENST00000478085 Q6ZRX8 168 aa7.78□□□□□ -1.16
SGSM3-209ENST00000478085 IGLV6-57P01721 117 aa7.78□□□□□ -1.16
SGSM3-209ENST00000478085 IGKV4-1P06312 121 aa7.77□□□□□ -1.17
SGSM3-209ENST00000478085 SERP1Q9Y6X1 66 aa7.77□□□□□ -1.17
SGSM3-209ENST00000478085 C9orf129Q5T035 196 aaKnown RBP7.76□□□□□ -1.17
SGSM3-209ENST00000478085 EPM2AB3EWF7 344 aa7.76□□□□□ -1.17
SGSM3-209ENST00000478085 OTOGQ6ZRI0 2925 aa7.76□□□□□ -1.17
SGSM3-209ENST00000478085 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
SGSM3-209ENST00000478085 BCE1O60756 84 aa7.75□□□□□ -1.17
SGSM3-209ENST00000478085 A0A087WTM6 91 aa7.75□□□□□ -1.17
SGSM3-209ENST00000478085 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
SGSM3-209ENST00000478085 Q6ZVQ6 151 aa7.75□□□□□ -1.17
SGSM3-209ENST00000478085 TENM1Q9UKZ4 2725 aa7.74□□□□□ -1.17
SGSM3-209ENST00000478085 C9orf163Q8N9P6 203 aa7.73□□□□□ -1.17
SGSM3-209ENST00000478085 TRBV7-6A0A0J9YX20 115 aa7.73□□□□□ -1.17
SGSM3-209ENST00000478085 Q8N9L7 120 aa7.73□□□□□ -1.17
SGSM3-209ENST00000478085 IGLV1-50A0A075B6I6 118 aa7.72□□□□□ -1.17
SGSM3-209ENST00000478085 VPS13CQ709C8 3753 aa7.72□□□□□ -1.17
SGSM3-209ENST00000478085 LINC01547P58512 204 aaPredicted RBP7.71□□□□□ -1.17
SGSM3-209ENST00000478085 PDZD2O15018 2839 aa7.71□□□□□ -1.18
SGSM3-209ENST00000478085 NBPF19A0A087WUL8 3843 aa7.71□□□□□ -1.18
SGSM3-209ENST00000478085 MOBPQ13875 183 aa7.71□□□□□ -1.18
SGSM3-209ENST00000478085 KCNQ1DNQ9H478 68 aa7.7□□□□□ -1.18
SGSM3-209ENST00000478085 FBN1P35555 2871 aaKnown RBP7.7□□□□□ -1.18
SGSM3-209ENST00000478085 CXCL6P80162 114 aa7.7□□□□□ -1.18
SGSM3-209ENST00000478085 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
SGSM3-209ENST00000478085 BRK1Q8WUW1 75 aa7.69□□□□□ -1.18
SGSM3-209ENST00000478085 FAM30AQ9NZY2 134 aa7.69□□□□□ -1.18
SGSM3-209ENST00000478085 IGHV6-1A0A0B4J1U7 121 aa7.69□□□□□ -1.18
SGSM3-209ENST00000478085 LINC00528Q8N1L1 170 aa7.69□□□□□ -1.18
SGSM3-209ENST00000478085 ZFHX3Q15911 3703 aa7.68□□□□□ -1.18
SGSM3-209ENST00000478085 LINC00476Q8WZB0 136 aa7.67□□□□□ -1.18
SGSM3-209ENST00000478085 LOC110117498A0A087WWA1 95 aa7.66□□□□□ -1.18
SGSM3-209ENST00000478085 Q6ZQT0 140 aa7.66□□□□□ -1.18
SGSM3-209ENST00000478085 TLX1NBP0CAT3 122 aa7.66□□□□□ -1.18
SGSM3-209ENST00000478085 MPLKIPQ8TAP9 179 aa7.65□□□□□ -1.19
SGSM3-209ENST00000478085 PRR4Q16378 134 aa7.64□□□□□ -1.19
SGSM3-209ENST00000478085 OBSCN-AS1Q96MR7 158 aa7.64□□□□□ -1.19
SGSM3-209ENST00000478085 TNP2Q05952 138 aa7.64□□□□□ -1.19
SGSM3-209ENST00000478085 CNBPP62633 177 aaKnown RBP7.63□□□□□ -1.19
SGSM3-209ENST00000478085 VWFP04275 2813 aa7.63□□□□□ -1.19
SGSM3-209ENST00000478085 A0A0G2JQZ4 141 aa7.63□□□□□ -1.19
SGSM3-209ENST00000478085 C4orf26Q17RF5 130 aa7.63□□□□□ -1.19
SGSM3-209ENST00000478085 Q8NBF4 154 aa7.63□□□□□ -1.19
SGSM3-209ENST00000478085 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
SGSM3-209ENST00000478085 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
SGSM3-209ENST00000478085 KRTAP1-5Q9BYS1 174 aa7.62□□□□□ -1.19
SGSM3-209ENST00000478085 SPACA4Q8TDM5 124 aa7.62□□□□□ -1.19
SGSM3-209ENST00000478085 CASC2Q6XLA1 102 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms