RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 Q8N8P6 123 aa3.78□□□□□ -1.8
PTPRN-214ENST00000477819 KMT2DO14686 5537 aa3.78□□□□□ -1.8
PTPRN-214ENST00000477819 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
PTPRN-214ENST00000477819 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 A0A1B0GW15 77 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 A0A1B0GXF2 115 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 HMSDA8MTL9 139 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 F8W036 122 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
PTPRN-214ENST00000477819 ADCYAP1P18509 176 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 VAMP3Q15836 100 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 C1orf195Q5TG92 126 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 Q75L30 129 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 ST20-AS1Q8NBB2 130 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 MAP1LC3AQ9H492 121 aa3.77□□□□□ -1.81
PTPRN-214ENST00000477819 COX17Q14061 63 aa3.76□□□□□ -1.81
PTPRN-214ENST00000477819 ORMDL2Q53FV1 153 aa3.76□□□□□ -1.81
PTPRN-214ENST00000477819 PAPPA-AS1Q5QFB9 102 aa3.76□□□□□ -1.81
PTPRN-214ENST00000477819 TRAV9-1A0A075B6T8 112 aa3.75□□□□□ -1.81
PTPRN-214ENST00000477819 LINC00158P58513 81 aa3.75□□□□□ -1.81
PTPRN-214ENST00000477819 RPL23P62829 140 aaKnown RBP3.75□□□□□ -1.81
PTPRN-214ENST00000477819 HSBP1O75506 76 aa3.74□□□□□ -1.81
PTPRN-214ENST00000477819 S100A8P05109 93 aa3.74□□□□□ -1.81
PTPRN-214ENST00000477819 BOD1L2Q8IYS8 172 aa3.74□□□□□ -1.81
PTPRN-214ENST00000477819 LINC00518Q8N0U6 118 aa3.74□□□□□ -1.81
PTPRN-214ENST00000477819 TOMM6Q96B49 74 aa3.74□□□□□ -1.81
PTPRN-214ENST00000477819 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
PTPRN-214ENST00000477819 CST9LQ9H4G1 147 aa3.74□□□□□ -1.81
PTPRN-214ENST00000477819 H3BRM9 83 aa3.73□□□□□ -1.81
PTPRN-214ENST00000477819 PMVKQ15126 192 aa3.73□□□□□ -1.81
PTPRN-214ENST00000477819 ADIRFQ15847 76 aa3.73□□□□□ -1.81
PTPRN-214ENST00000477819 RGS21Q2M5E4 152 aa3.73□□□□□ -1.81
PTPRN-214ENST00000477819 ATP11AUNQ6ZP68 121 aa3.73□□□□□ -1.81
PTPRN-214ENST00000477819 Q6ZRX8 168 aa3.73□□□□□ -1.81
PTPRN-214ENST00000477819 SRP19P09132 144 aaKnown RBP3.72□□□□□ -1.81
PTPRN-214ENST00000477819 C20orf166-AS1Q96NR2 134 aa3.72□□□□□ -1.81
PTPRN-214ENST00000477819 A0A0G2JQZ4 141 aa3.71□□□□□ -1.82
PTPRN-214ENST00000477819 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
PTPRN-214ENST00000477819 C5orf47Q569G3 176 aa3.71□□□□□ -1.82
PTPRN-214ENST00000477819 SMIM29Q86T20 159 aa3.71□□□□□ -1.82
PTPRN-214ENST00000477819 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
PTPRN-214ENST00000477819 LAMTOR2Q9Y2Q5 125 aa3.71□□□□□ -1.82
PTPRN-214ENST00000477819 SMIM13P0DJ93 91 aa3.7□□□□□ -1.82
PTPRN-214ENST00000477819 ZNF22P17026 224 aaPredicted RBP3.7□□□□□ -1.82
PTPRN-214ENST00000477819 K7EMI3 77 aa3.69□□□□□ -1.82
PTPRN-214ENST00000477819 URB1-AS1Q96HZ7 61 aa3.69□□□□□ -1.82
PTPRN-214ENST00000477819 MAP1LC3CQ9BXW4 147 aa3.69□□□□□ -1.82
PTPRN-214ENST00000477819 NXT2Q9NPJ8 142 aaKnown RBP3.69□□□□□ -1.82
PTPRN-214ENST00000477819 TRBV20-1A0A075B6N2 111 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 IGLC3P0DOY3 106 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 DDTP30046 118 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 S100A12P80511 92 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 CD164Q04900 197 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 Q1RN00 199 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 Q5XG85 94 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 ALKAL2Q6UX46 152 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 MIR7-3HGQ8N6C7 128 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 OBSCN-AS1Q96MR7 158 aa3.68□□□□□ -1.82
PTPRN-214ENST00000477819 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
PTPRN-214ENST00000477819 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
PTPRN-214ENST00000477819 G0S2P27469 103 aa3.67□□□□□ -1.82
PTPRN-214ENST00000477819 ATP5L2Q7Z4Y8 100 aa3.67□□□□□ -1.82
PTPRN-214ENST00000477819 SLC51BQ86UW2 128 aa3.67□□□□□ -1.82
PTPRN-214ENST00000477819 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 C9JQL5 133 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 SPRR1BP22528 89 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 NDUFA6P56556 154 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 PRO1933Q9H354 126 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 NAT8Q9UHE5 227 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 V9GYY9 64 aa3.66□□□□□ -1.82
PTPRN-214ENST00000477819 JOSD1Q15040 202 aaPredicted RBP3.65□□□□□ -1.83
PTPRN-214ENST00000477819 PCP2Q8IVA1 136 aa3.65□□□□□ -1.83
PTPRN-214ENST00000477819 C11orf86A6NJI1 115 aa3.64□□□□□ -1.83
PTPRN-214ENST00000477819 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
PTPRN-214ENST00000477819 MEIG1Q5JSS6 88 aa3.64□□□□□ -1.83
PTPRN-214ENST00000477819 C10orf91Q5T1B1 145 aa3.64□□□□□ -1.83
PTPRN-214ENST00000477819 TMEM170BQ5T4T1 132 aa3.64□□□□□ -1.83
PTPRN-214ENST00000477819 SFTA2Q6UW10 78 aa3.64□□□□□ -1.83
PTPRN-214ENST00000477819 TRAV23DV6A0A075B6W5 121 aa3.63□□□□□ -1.83
PTPRN-214ENST00000477819 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
PTPRN-214ENST00000477819 SLC25A34Q6PIV7 304 aa3.63□□□□□ -1.83
PTPRN-214ENST00000477819 Q6ZVQ6 151 aa3.63□□□□□ -1.83
PTPRN-214ENST00000477819 DEFB105AQ8NG35 78 aa3.63□□□□□ -1.83
PTPRN-214ENST00000477819 ZNF73O43830 326 aaPredicted RBP3.62□□□□□ -1.83
PTPRN-214ENST00000477819 AKR1D1P51857 326 aa3.62□□□□□ -1.83
PTPRN-214ENST00000477819 MTURNQ8N3F0 131 aa3.62□□□□□ -1.83
PTPRN-214ENST00000477819 LOC107984156A0A0G2JMH3 177 aa3.61□□□□□ -1.83
PTPRN-214ENST00000477819 TRBV10-2A0A0K0K1G8 114 aa3.61□□□□□ -1.83
PTPRN-214ENST00000477819 C6orf99Q4VX62 202 aa3.61□□□□□ -1.83
PTPRN-214ENST00000477819 S100A7L2Q5SY68 101 aa3.61□□□□□ -1.83
PTPRN-214ENST00000477819 ARL17AQ8IVW1 177 aa3.61□□□□□ -1.83
PTPRN-214ENST00000477819 Q96NJ1 140 aa3.61□□□□□ -1.83
PTPRN-214ENST00000477819 LINC01546A6NGU7 62 aa3.6□□□□□ -1.83
PTPRN-214ENST00000477819 TCL1BO95988 128 aa3.6□□□□□ -1.83
PTPRN-214ENST00000477819 TMEM223A0PJW6 202 aa3.59□□□□□ -1.83
PTPRN-214ENST00000477819 KRTAP16-1A8MUX0 517 aa3.59□□□□□ -1.83
PTPRN-214ENST00000477819 S100A1P23297 94 aa3.59□□□□□ -1.83
PTPRN-214ENST00000477819 TAL2Q16559 108 aa3.59□□□□□ -1.83
PTPRN-214ENST00000477819 SPANXB1Q9NS25 103 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms