RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 A6NED7 52 aa8.55□□□□□ -1.04
RTFDC1-207ENST00000477573 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
RTFDC1-207ENST00000477573 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
RTFDC1-207ENST00000477573 NOTCH3Q9UM47 2321 aa8.54□□□□□ -1.04
RTFDC1-207ENST00000477573 C16orf74Q96GX8 76 aa8.54□□□□□ -1.04
RTFDC1-207ENST00000477573 TRGV1A0A0A0MS02 117 aa8.54□□□□□ -1.04
RTFDC1-207ENST00000477573 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
RTFDC1-207ENST00000477573 GIG44P09565 113 aaPredicted RBP8.53□□□□□ -1.04
RTFDC1-207ENST00000477573 COX7BP24311 80 aa8.53□□□□□ -1.04
RTFDC1-207ENST00000477573 LINC01554Q52M75 96 aa8.53□□□□□ -1.04
RTFDC1-207ENST00000477573 F8P00451 2351 aa8.53□□□□□ -1.04
RTFDC1-207ENST00000477573 C6orf99Q4VX62 202 aa8.52□□□□□ -1.04
RTFDC1-207ENST00000477573 Q9BRP9 147 aa8.52□□□□□ -1.04
RTFDC1-207ENST00000477573 Q6ZSN1 163 aa8.52□□□□□ -1.05
RTFDC1-207ENST00000477573 TEP1Q99973 2627 aaKnown RBP8.52□□□□□ -1.05
RTFDC1-207ENST00000477573 ATRQ13535 2644 aa8.51□□□□□ -1.05
RTFDC1-207ENST00000477573 IGLV4-60A0A075B6I1 120 aa8.51□□□□□ -1.05
RTFDC1-207ENST00000477573 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
RTFDC1-207ENST00000477573 CSNK1G2-AS1Q8NCQ2 148 aa8.51□□□□□ -1.05
RTFDC1-207ENST00000477573 B9D2Q9BPU9 175 aa8.51□□□□□ -1.05
RTFDC1-207ENST00000477573 TRGV2A0A075B6R0 118 aa8.49□□□□□ -1.05
RTFDC1-207ENST00000477573 MOBPQ13875 183 aa8.49□□□□□ -1.05
RTFDC1-207ENST00000477573 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
RTFDC1-207ENST00000477573 NOP10Q9NPE3 64 aaKnown RBP8.49□□□□□ -1.05
RTFDC1-207ENST00000477573 TENM1Q9UKZ4 2725 aa8.49□□□□□ -1.05
RTFDC1-207ENST00000477573 Q8N9L7 120 aa8.49□□□□□ -1.05
RTFDC1-207ENST00000477573 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
RTFDC1-207ENST00000477573 ETDCA0A1B0GVM5 59 aa8.48□□□□□ -1.05
RTFDC1-207ENST00000477573 SMIM29Q86T20 159 aa8.48□□□□□ -1.05
RTFDC1-207ENST00000477573 SPANXA2-OT1Q8N9U9 137 aa8.48□□□□□ -1.05
RTFDC1-207ENST00000477573 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
RTFDC1-207ENST00000477573 MDFIQ99750 246 aa8.48□□□□□ -1.05
RTFDC1-207ENST00000477573 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
RTFDC1-207ENST00000477573 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
RTFDC1-207ENST00000477573 VWFP04275 2813 aa8.47□□□□□ -1.05
RTFDC1-207ENST00000477573 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.46□□□□□ -1.05
RTFDC1-207ENST00000477573 Q6ZQY7 126 aa8.46□□□□□ -1.05
RTFDC1-207ENST00000477573 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
RTFDC1-207ENST00000477573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.06
RTFDC1-207ENST00000477573 LINC00313P59037 77 aa8.45□□□□□ -1.06
RTFDC1-207ENST00000477573 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
RTFDC1-207ENST00000477573 COX17Q14061 63 aa8.44□□□□□ -1.06
RTFDC1-207ENST00000477573 CELA1Q9UNI1 258 aa8.44□□□□□ -1.06
RTFDC1-207ENST00000477573 TRGV4A0A0C4DH28 118 aa8.42□□□□□ -1.06
RTFDC1-207ENST00000477573 A0A1B0GW54 56 aa8.42□□□□□ -1.06
RTFDC1-207ENST00000477573 C3orf84H3BNL1 204 aa8.42□□□□□ -1.06
RTFDC1-207ENST00000477573 A0A087X002 238 aa8.41□□□□□ -1.06
RTFDC1-207ENST00000477573 PRR4Q16378 134 aa8.41□□□□□ -1.06
RTFDC1-207ENST00000477573 MP68P56378 58 aa8.41□□□□□ -1.06
RTFDC1-207ENST00000477573 HIGD2BQ4VC39 106 aa8.41□□□□□ -1.06
RTFDC1-207ENST00000477573 Q8IZM0 81 aa8.4□□□□□ -1.06
RTFDC1-207ENST00000477573 PRR3P79522 188 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-207ENST00000477573 KRTAP24-1Q3LI83 254 aa8.39□□□□□ -1.07
RTFDC1-207ENST00000477573 IGHV4-30-4P0DP06 118 aa8.39□□□□□ -1.07
RTFDC1-207ENST00000477573 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
RTFDC1-207ENST00000477573 X6R8D5 127 aa8.39□□□□□ -1.07
RTFDC1-207ENST00000477573 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
RTFDC1-207ENST00000477573 DEFB130BP0DP73 79 aa8.38□□□□□ -1.07
RTFDC1-207ENST00000477573 DEFB130AP0DP74 79 aa8.38□□□□□ -1.07
RTFDC1-207ENST00000477573 C10orf25Q5T742 122 aa8.38□□□□□ -1.07
RTFDC1-207ENST00000477573 KCNQ1DNQ9H478 68 aa8.38□□□□□ -1.07
RTFDC1-207ENST00000477573 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
RTFDC1-207ENST00000477573 TRRAPQ9Y4A5 3859 aa8.37□□□□□ -1.07
RTFDC1-207ENST00000477573 DEFB135Q30KP9 77 aa8.37□□□□□ -1.07
RTFDC1-207ENST00000477573 OXLD1Q5BKU9 147 aa8.37□□□□□ -1.07
RTFDC1-207ENST00000477573 H3BPC8 53 aa8.35□□□□□ -1.07
RTFDC1-207ENST00000477573 IGLV6-57P01721 117 aa8.35□□□□□ -1.07
RTFDC1-207ENST00000477573 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
RTFDC1-207ENST00000477573 ST20-AS1Q8NBB2 130 aa8.34□□□□□ -1.08
RTFDC1-207ENST00000477573 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.08
RTFDC1-207ENST00000477573 NBEAL2Q6ZNJ1 2754 aa8.33□□□□□ -1.08
RTFDC1-207ENST00000477573 PRO0255Q9UI72 69 aa8.33□□□□□ -1.08
RTFDC1-207ENST00000477573 IGHV4-28A0A0C4DH34 117 aa8.32□□□□□ -1.08
RTFDC1-207ENST00000477573 PRB2P02812 416 aaPredicted RBP8.31□□□□□ -1.08
RTFDC1-207ENST00000477573 KLK12Q9UKR0 248 aa8.31□□□□□ -1.08
RTFDC1-207ENST00000477573 STAB1Q9NY15 2570 aa8.3□□□□□ -1.08
RTFDC1-207ENST00000477573 GYPEP15421 78 aa8.3□□□□□ -1.08
RTFDC1-207ENST00000477573 EGFEM1PQ0D2K5 195 aa8.3□□□□□ -1.08
RTFDC1-207ENST00000477573 Q8NAQ8 132 aa8.3□□□□□ -1.08
RTFDC1-207ENST00000477573 MAST4O15021 2626 aa8.3□□□□□ -1.08
RTFDC1-207ENST00000477573 SPART-AS1P0CW21 52 aa8.29□□□□□ -1.08
RTFDC1-207ENST00000477573 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
RTFDC1-207ENST00000477573 H0Y9J4 135 aa8.28□□□□□ -1.08
RTFDC1-207ENST00000477573 DEFB4AO15263 64 aa8.28□□□□□ -1.08
RTFDC1-207ENST00000477573 CNBPP62633 177 aaKnown RBP8.28□□□□□ -1.08
RTFDC1-207ENST00000477573 FBN1P35555 2871 aaKnown RBP8.27□□□□□ -1.09
RTFDC1-207ENST00000477573 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
RTFDC1-207ENST00000477573 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
RTFDC1-207ENST00000477573 KRTAP10-11P60412 298 aa8.27□□□□□ -1.09
RTFDC1-207ENST00000477573 SPAG11BQ08648 103 aa8.26□□□□□ -1.09
RTFDC1-207ENST00000477573 COA5Q86WW8 74 aa8.26□□□□□ -1.09
RTFDC1-207ENST00000477573 Q8NDZ9 215 aa8.26□□□□□ -1.09
RTFDC1-207ENST00000477573 CMYA5Q8N3K9 4069 aa8.26□□□□□ -1.09
RTFDC1-207ENST00000477573 CYSRT1A8MQ03 144 aa8.24□□□□□ -1.09
RTFDC1-207ENST00000477573 COL6A5A8TX70 2615 aa8.24□□□□□ -1.09
RTFDC1-207ENST00000477573 A0A1B0GUV1 79 aa8.22□□□□□ -1.09
RTFDC1-207ENST00000477573 PKD1L1Q8TDX9 2849 aa8.22□□□□□ -1.09
RTFDC1-207ENST00000477573 IGLV5-48A0A075B6I7 105 aa8.21□□□□□ -1.09
RTFDC1-207ENST00000477573 DSCR10P59022 87 aa8.21□□□□□ -1.09
RTFDC1-207ENST00000477573 HTN3P15516 51 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms