RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 IGKV3D-7A0A0C4DH55 119 aa7.15□□□□□ -1.27
HLA-DMB-260ENST00000477537 Q6JHZ5 121 aa7.15□□□□□ -1.27
HLA-DMB-260ENST00000477537 UBE2DNLQ8IWF7 75 aa7.15□□□□□ -1.27
HLA-DMB-260ENST00000477537 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.27
HLA-DMB-260ENST00000477537 PLA2G2DQ9UNK4 145 aa7.15□□□□□ -1.27
HLA-DMB-260ENST00000477537 FAM236AA0A1B0GUQ0 79 aa7.14□□□□□ -1.27
HLA-DMB-260ENST00000477537 FAM236BA0A1B0GV22 79 aa7.14□□□□□ -1.27
HLA-DMB-260ENST00000477537 FAM168BA1KXE4 195 aa7.14□□□□□ -1.27
HLA-DMB-260ENST00000477537 Q6ZQT0 140 aa7.14□□□□□ -1.27
HLA-DMB-260ENST00000477537 KRTAP1-5Q9BYS1 174 aa7.14□□□□□ -1.27
HLA-DMB-260ENST00000477537 KCNQ1DNQ9H478 68 aa7.14□□□□□ -1.27
HLA-DMB-260ENST00000477537 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
HLA-DMB-260ENST00000477537 LOC110117498A0A087WWA1 95 aa7.13□□□□□ -1.27
HLA-DMB-260ENST00000477537 APLNQ9ULZ1 77 aa7.13□□□□□ -1.27
HLA-DMB-260ENST00000477537 GHRHP01286 108 aa7.13□□□□□ -1.27
HLA-DMB-260ENST00000477537 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
HLA-DMB-260ENST00000477537 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
HLA-DMB-260ENST00000477537 DYNC2H1Q8NCM8 4307 aaKnown RBP7.12□□□□□ -1.27
HLA-DMB-260ENST00000477537 IGLV5-37A0A075B6J1 123 aa7.11□□□□□ -1.27
HLA-DMB-260ENST00000477537 LOC107984640A0A0U1RRK4 108 aa7.11□□□□□ -1.27
HLA-DMB-260ENST00000477537 RPL37AP8A6NKH3 93 aa7.11□□□□□ -1.27
HLA-DMB-260ENST00000477537 FAM19A5Q7Z5A7 132 aaPredicted RBP7.1□□□□□ -1.27
HLA-DMB-260ENST00000477537 KRTAP7-1Q8IUC3 87 aa7.1□□□□□ -1.27
HLA-DMB-260ENST00000477537 CCDC179H3BU77 68 aa7.09□□□□□ -1.27
HLA-DMB-260ENST00000477537 PSCAO43653 123 aa7.09□□□□□ -1.27
HLA-DMB-260ENST00000477537 IGLV1-50A0A075B6I6 118 aa7.09□□□□□ -1.27
HLA-DMB-260ENST00000477537 M0R2N4 97 aa7.09□□□□□ -1.27
HLA-DMB-260ENST00000477537 PRYO14603 147 aa7.09□□□□□ -1.27
HLA-DMB-260ENST00000477537 PDE6GP18545 87 aa7.09□□□□□ -1.27
HLA-DMB-260ENST00000477537 UBL5Q9BZL1 73 aa7.08□□□□□ -1.28
HLA-DMB-260ENST00000477537 MRPL55Q7Z7F7 128 aaKnown RBP7.07□□□□□ -1.28
HLA-DMB-260ENST00000477537 TRBV7-4A0A0J9YYF1 115 aa7.07□□□□□ -1.28
HLA-DMB-260ENST00000477537 B5MCH6 92 aa7.07□□□□□ -1.28
HLA-DMB-260ENST00000477537 ATP5EP2Q5VTU8 51 aa7.07□□□□□ -1.28
HLA-DMB-260ENST00000477537 ETDCA0A1B0GVM5 59 aa7.06□□□□□ -1.28
HLA-DMB-260ENST00000477537 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
HLA-DMB-260ENST00000477537 Q6ZRX8 168 aa7.06□□□□□ -1.28
HLA-DMB-260ENST00000477537 DEFB105AQ8NG35 78 aa7.06□□□□□ -1.28
HLA-DMB-260ENST00000477537 DNAH10Q8IVF4 4471 aa7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 A0A087WVE0 104 aa7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 SPRR1AP35321 89 aa7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 HIST1H4AP62805 103 aaKnown RBP7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 DHRS4-AS1Q9P1J3 65 aa7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 A0A096LNI7 61 aa7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 Q9BRP9 147 aa7.05□□□□□ -1.28
HLA-DMB-260ENST00000477537 NUPR2A6NF83 97 aa7.04□□□□□ -1.28
HLA-DMB-260ENST00000477537 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.03□□□□□ -1.28
HLA-DMB-260ENST00000477537 IGKV2-24A0A0C4DH68 120 aa7.03□□□□□ -1.28
HLA-DMB-260ENST00000477537 C16orf90A8MZG2 172 aa7.03□□□□□ -1.28
HLA-DMB-260ENST00000477537 Q8N377 158 aa7.03□□□□□ -1.28
HLA-DMB-260ENST00000477537 C14orf177Q52M58 125 aa7.03□□□□□ -1.28
HLA-DMB-260ENST00000477537 Q6ZVQ6 151 aa7.03□□□□□ -1.28
HLA-DMB-260ENST00000477537 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
HLA-DMB-260ENST00000477537 LINC01547P58512 204 aaPredicted RBP7.02□□□□□ -1.29
HLA-DMB-260ENST00000477537 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
HLA-DMB-260ENST00000477537 ATOX1O00244 68 aa7.01□□□□□ -1.29
HLA-DMB-260ENST00000477537 REG3GQ6UW15 175 aa7.01□□□□□ -1.29
HLA-DMB-260ENST00000477537 FAM19A1Q7Z5A9 133 aa7.01□□□□□ -1.29
HLA-DMB-260ENST00000477537 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
HLA-DMB-260ENST00000477537 HAMPP81172 84 aa7.01□□□□□ -1.29
HLA-DMB-260ENST00000477537 ST20-AS1Q8NBB2 130 aa7.01□□□□□ -1.29
HLA-DMB-260ENST00000477537 UBE2BP63146 152 aa7□□□□□ -1.29
HLA-DMB-260ENST00000477537 ERC2-IT1O76042 136 aa6.99□□□□□ -1.29
HLA-DMB-260ENST00000477537 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
HLA-DMB-260ENST00000477537 C3orf22Q8N5N4 141 aa6.99□□□□□ -1.29
HLA-DMB-260ENST00000477537 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
HLA-DMB-260ENST00000477537 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
HLA-DMB-260ENST00000477537 CHTF8P0CG12 524 aa6.97□□□□□ -1.29
HLA-DMB-260ENST00000477537 VPS13DQ5THJ4 4388 aa6.97□□□□□ -1.29
HLA-DMB-260ENST00000477537 UQCRQO14949 82 aa6.97□□□□□ -1.29
HLA-DMB-260ENST00000477537 COX7CP15954 63 aa6.97□□□□□ -1.29
HLA-DMB-260ENST00000477537 CXCL6P80162 114 aa6.96□□□□□ -1.3
HLA-DMB-260ENST00000477537 Q6ZRN7 208 aaPredicted RBP6.96□□□□□ -1.3
HLA-DMB-260ENST00000477537 C9orf153Q5TBE3 101 aa6.95□□□□□ -1.3
HLA-DMB-260ENST00000477537 C9orf163Q8N9P6 203 aa6.95□□□□□ -1.3
HLA-DMB-260ENST00000477537 PRLHP81277 87 aa6.95□□□□□ -1.3
HLA-DMB-260ENST00000477537 SCXQ7RTU7 201 aa6.95□□□□□ -1.3
HLA-DMB-260ENST00000477537 TNP2Q05952 138 aa6.94□□□□□ -1.3
HLA-DMB-260ENST00000477537 PHF5AQ7RTV0 110 aaKnown RBP6.94□□□□□ -1.3
HLA-DMB-260ENST00000477537 WWC2-AS2Q96NR7 200 aa6.94□□□□□ -1.3
HLA-DMB-260ENST00000477537 C3orf84H3BNL1 204 aa6.93□□□□□ -1.3
HLA-DMB-260ENST00000477537 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
HLA-DMB-260ENST00000477537 C1orf137Q5JT78 98 aa6.93□□□□□ -1.3
HLA-DMB-260ENST00000477537 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
HLA-DMB-260ENST00000477537 NREPQ16612 68 aa6.92□□□□□ -1.3
HLA-DMB-260ENST00000477537 KRTAP11-1Q8IUC1 163 aa6.92□□□□□ -1.3
HLA-DMB-260ENST00000477537 HYDINQ4G0P3 5121 aa6.92□□□□□ -1.3
HLA-DMB-260ENST00000477537 SACSQ9NZJ4 4579 aa6.92□□□□□ -1.3
HLA-DMB-260ENST00000477537 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
HLA-DMB-260ENST00000477537 FUSP35637 526 aaKnown RBP eCLIP6.91□□□□□ -1.3
HLA-DMB-260ENST00000477537 SMIM29Q86T20 159 aa6.91□□□□□ -1.3
HLA-DMB-260ENST00000477537 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
HLA-DMB-260ENST00000477537 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
HLA-DMB-260ENST00000477537 DNAH2Q9P225 4427 aa6.9□□□□□ -1.31
HLA-DMB-260ENST00000477537 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.31
HLA-DMB-260ENST00000477537 Q8NBF4 154 aa6.89□□□□□ -1.31
HLA-DMB-260ENST00000477537 LINC00474Q9P2X8 69 aa6.89□□□□□ -1.31
HLA-DMB-260ENST00000477537 KMT2CQ8NEZ4 4911 aaKnown RBP6.89□□□□□ -1.31
HLA-DMB-260ENST00000477537 F8WEM9 126 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms