RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ERG28Q9UKR5 140 aa2.2□□□□□ -2.06
UBR3-209ENST00000477461 PRKDCP78527 4128 aaKnown RBP2.19□□□□□ -2.06
UBR3-209ENST00000477461 TMEM238C9JI98 176 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 TSTD3H0UI37 97 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 TSPAN13O95857 204 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 SMIM13P0DJ93 91 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 COX8AP10176 69 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 PFN2P35080 140 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 UBE2AP49459 152 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 TSPEAR-AS2P59090 65 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 COX17Q14061 63 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 C5orf47Q569G3 176 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 C9orf116Q5BN46 136 aaPredicted RBP2.19□□□□□ -2.06
UBR3-209ENST00000477461 C9orf163Q8N9P6 203 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 COPS9Q8WXC6 57 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 DPH3Q96FX2 82 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 C14orf144Q96I85 54 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 C12orf57Q99622 126 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 MIEN1Q9BRT3 115 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 TTTY13Q9BZ97 58 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 C6orf48Q9UBA6 75 aa2.19□□□□□ -2.06
UBR3-209ENST00000477461 HUWE1Q7Z6Z7 4374 aaKnown RBP2.19□□□□□ -2.06
UBR3-209ENST00000477461 IGKV2-24A0A0C4DH68 120 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 C16orf90A8MZG2 172 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 NDUFC2-KCTD14E9PQ53 114 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 DLEU1O43261 78 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 TIMM17BO60830 172 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 TLX1NBP0CAT3 122 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 BOD1L2Q8IYS8 172 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 PRO1933Q9H354 126 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 LINC00474Q9P2X8 69 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 UQCR10Q9UDW1 63 aa2.18□□□□□ -2.06
UBR3-209ENST00000477461 DNAH9Q9NYC9 4486 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 A0A096LNI7 61 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 IFITM1P13164 125 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 FUSP35637 526 aaKnown RBP eCLIP2.17□□□□□ -2.06
UBR3-209ENST00000477461 NPC2P61916 151 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 LINC00483Q53H64 154 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 MIR7-3HGQ8N6C7 128 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 DAND5Q8N907 189 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 XAGE1AQ9HD64 81 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 HIGD1BQ9P298 99 aa2.17□□□□□ -2.06
UBR3-209ENST00000477461 TAL2Q16559 108 aa2.16□□□□□ -2.06
UBR3-209ENST00000477461 SDIM1Q6ZPB5 146 aa2.16□□□□□ -2.06
UBR3-209ENST00000477461 LINC00308Q8TCZ7 52 aa2.16□□□□□ -2.06
UBR3-209ENST00000477461 SPANXDQ9BXN6 97 aa2.16□□□□□ -2.06
UBR3-209ENST00000477461 SND1-IT1Q9HBX3 110 aa2.16□□□□□ -2.06
UBR3-209ENST00000477461 SPANXB1Q9NS25 103 aaPredicted RBP2.16□□□□□ -2.06
UBR3-209ENST00000477461 SPANXCQ9NY87 97 aa2.16□□□□□ -2.06
UBR3-209ENST00000477461 TP73-AS1Q9UF72 201 aa2.16□□□□□ -2.06
UBR3-209ENST00000477461 M0R143 59 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 HSD52Q0P140 79 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 MOBPQ13875 183 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 Q5W150 140 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 C2orf91Q6ZV80 131 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 FAM19A5Q7Z5A7 132 aaPredicted RBP2.15□□□□□ -2.07
UBR3-209ENST00000477461 MUSTN1Q8IVN3 82 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 OR13C6PQ8NH95 151 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 CSMD3Q7Z407 3707 aa2.15□□□□□ -2.07
UBR3-209ENST00000477461 LOC107984156A0A0G2JMH3 177 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 A0A1B0GVX0 72 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 A6NDN8 102 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 M0QXV9 152 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 M0R378 163 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 NCR3O14931 201 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 NDUFC2O95298 119 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 DDTP30046 118 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 UBE2BP63146 152 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 CTAG1AP78358 180 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 S100A7L2Q5SY68 101 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 SOSTDC1Q6X4U4 206 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 MRPL55Q7Z7F7 128 aaKnown RBP2.14□□□□□ -2.07
UBR3-209ENST00000477461 ARL17AQ8IVW1 177 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 SPACA4Q8TDM5 124 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 RAB37Q96AX2 223 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 CBY1Q9Y3M2 126 aa2.14□□□□□ -2.07
UBR3-209ENST00000477461 TRAV13-2A0A0B4J235 113 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 TRBV10-2A0A0K0K1G8 114 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 A0A1W2PNN7 141 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 HINT1P49773 126 aaPredicted RBP2.13□□□□□ -2.07
UBR3-209ENST00000477461 BATFQ16520 125 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 SCXQ7RTU7 201 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 PHF5AQ7RTV0 110 aaKnown RBP2.13□□□□□ -2.07
UBR3-209ENST00000477461 CIRBP-AS1Q8TBR5 109 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 NHP2Q9NX24 153 aaKnown RBP2.13□□□□□ -2.07
UBR3-209ENST00000477461 PLAC8Q9NZF1 115 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 C22orf24Q9Y442 160 aa2.13□□□□□ -2.07
UBR3-209ENST00000477461 DNAH7Q8WXX0 4024 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 TRBV10-3A0A0K0K1G6 114 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 H7C2G1 150 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 FXYD2P54710 66 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 PRR3P79522 188 aaKnown RBP2.12□□□□□ -2.07
UBR3-209ENST00000477461 HAMPP81172 84 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 BVES-AS1Q5T3Y7 98 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 IGFL1Q6UW32 110 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 Q6ZSA8 131 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 TMEM126AQ9H061 195 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 ALMS1Q8TCU4 4167 aa2.12□□□□□ -2.07
UBR3-209ENST00000477461 STARD9Q9P2P6 4700 aa2.11□□□□□ -2.07
UBR3-209ENST00000477461 IGLV1-50A0A075B6I6 118 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms