RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 VAMP8Q9BV40 100 aa2.47□□□□□ -2.01
PDZRN3-206ENST00000477434 TOMM7Q9P0U1 55 aa2.47□□□□□ -2.01
PDZRN3-206ENST00000477434 NDUFA1O15239 70 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 DLEU1O43261 78 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 LGALS3P17931 250 aaKnown RBP2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 CXCL5P42830 114 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 TSPEAR-AS2P59090 65 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 CKS1BP61024 79 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 CNBPP62633 177 aaKnown RBP2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 HERV-K104P63124 156 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 Q6ZSA8 131 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 SCXQ7RTU7 201 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 PCP2Q8IVA1 136 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 BOD1L2Q8IYS8 172 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 LINC00518Q8N0U6 118 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 Q8N814 137 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 LINC00526Q96FQ7 95 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 C12orf57Q99622 126 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 NDUFA12Q9UI09 145 aa2.46□□□□□ -2.02
PDZRN3-206ENST00000477434 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 A0A0J9YXY3 114 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 TRBV30A0A0K0K1B3 111 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 MYMXA0A1B0GTQ4 84 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 LINC00587B1AMM8 73 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 PANO1I0J062 215 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 MT1HL1P0DM35 61 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 COX8AP10176 69 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 SYCNQ0VAF6 134 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 COX17Q14061 63 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 C2orf82Q6UX34 121 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 Q6ZRU5 148 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 C9orf163Q8N9P6 203 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 C14orf144Q96I85 54 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 CARD19Q96LW7 228 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 CAMK2N2Q96S95 79 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 TTTY13Q9BZ97 58 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 C6orf48Q9UBA6 75 aa2.45□□□□□ -2.02
PDZRN3-206ENST00000477434 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.44□□□□□ -2.02
PDZRN3-206ENST00000477434 ZNF815PA8K554 130 aa2.44□□□□□ -2.02
PDZRN3-206ENST00000477434 TLX1NBP0CAT3 122 aa2.44□□□□□ -2.02
PDZRN3-206ENST00000477434 CIRBPQ14011 172 aaKnown RBP2.44□□□□□ -2.02
PDZRN3-206ENST00000477434 C9orf116Q5BN46 136 aaPredicted RBP2.44□□□□□ -2.02
PDZRN3-206ENST00000477434 SLC25A34Q6PIV7 304 aa2.44□□□□□ -2.02
PDZRN3-206ENST00000477434 SCGB1D4Q6XE38 83 aa2.44□□□□□ -2.02
PDZRN3-206ENST00000477434 A4D1N5 150 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 NDUFC2-KCTD14E9PQ53 114 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 TIMM17BO60830 172 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 SMIM13P0DJ93 91 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 PFN2P35080 140 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 LINC00158P58513 81 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 MEIG1Q5JSS6 88 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 SDIM1Q6ZPB5 146 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 MIEN1Q9BRT3 115 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 HIGD1BQ9P298 99 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 UQCR10Q9UDW1 63 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 ERG28Q9UKR5 140 aa2.43□□□□□ -2.02
PDZRN3-206ENST00000477434 LOC107984156A0A0G2JMH3 177 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 A0A0U1RRA0 63 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 LOC107984640A0A0U1RRK4 108 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 TMEM238C9JI98 176 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 TSTD3H0UI37 97 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 ARL17AQ8IVW1 177 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 MIR7-3HGQ8N6C7 128 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 CIRBP-AS1Q8TBR5 109 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 SPANXDQ9BXN6 97 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 PRO1933Q9H354 126 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 PPDPFQ9H3Y8 114 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 SPANXB1Q9NS25 103 aaPredicted RBP2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 SPANXCQ9NY87 97 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 TP73-AS1Q9UF72 201 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 PKIGQ9Y2B9 76 aa2.42□□□□□ -2.02
PDZRN3-206ENST00000477434 A0A096LNI7 61 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 IFITM1P13164 125 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 TAL2Q16559 108 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 DAND5Q8N907 189 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 LINC00308Q8TCZ7 52 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 SND1-IT1Q9HBX3 110 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 XAGE1AQ9HD64 81 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 LINC00474Q9P2X8 69 aa2.41□□□□□ -2.02
PDZRN3-206ENST00000477434 IGLV8-61A0A075B6I0 122 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 NDUFC2O95298 119 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 DDTP30046 118 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 RPL18AQ02543 176 aaKnown RBP2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 SOSTDC1Q6X4U4 206 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 MUSTN1Q8IVN3 82 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 CEND1Q8N111 149 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 COPS9Q8WXC6 57 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 HIST1H4GQ99525 98 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 MUC17Q685J3 4493 aa2.4□□□□□ -2.03
PDZRN3-206ENST00000477434 IGKV2-24A0A0C4DH68 120 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 CHTF8P0CG12 524 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 NPC2P61916 151 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 CTAG1AP78358 180 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 HSD52Q0P140 79 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 Q8NDZ9 215 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms