RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
COL4A6-206ENST00000477085 TEN1Q86WV5 123 aa9.14□□□□□ -0.95
COL4A6-206ENST00000477085 VPS25Q9BRG1 176 aa9.14□□□□□ -0.95
COL4A6-206ENST00000477085 IGLV1-50A0A075B6I6 118 aa9.13□□□□□ -0.95
COL4A6-206ENST00000477085 H0YGX0 51 aa9.13□□□□□ -0.95
COL4A6-206ENST00000477085 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
COL4A6-206ENST00000477085 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
COL4A6-206ENST00000477085 KMT2CQ8NEZ4 4911 aaKnown RBP9.13□□□□□ -0.95
COL4A6-206ENST00000477085 IGLV5-52A0A0A0MRZ9 124 aa9.12□□□□□ -0.95
COL4A6-206ENST00000477085 ANKRD29Q8N6D5 301 aa9.12□□□□□ -0.95
COL4A6-206ENST00000477085 J3QR89 54 aa9.12□□□□□ -0.95
COL4A6-206ENST00000477085 CBY1Q9Y3M2 126 aa9.12□□□□□ -0.95
COL4A6-206ENST00000477085 SPACA4Q8TDM5 124 aa9.11□□□□□ -0.95
COL4A6-206ENST00000477085 RYR2Q92736 4967 aa9.1□□□□□ -0.95
COL4A6-206ENST00000477085 KRTAP11-1Q8IUC1 163 aa9.1□□□□□ -0.95
COL4A6-206ENST00000477085 DIRC1Q969H9 104 aa9.1□□□□□ -0.95
COL4A6-206ENST00000477085 TRACP01848 142 aa9.09□□□□□ -0.95
COL4A6-206ENST00000477085 PPDPFLQ8WWR9 84 aa9.09□□□□□ -0.95
COL4A6-206ENST00000477085 EPM2AB3EWF7 344 aa9.09□□□□□ -0.95
COL4A6-206ENST00000477085 H3BT86 120 aa9.09□□□□□ -0.95
COL4A6-206ENST00000477085 LINC00575Q6W349 94 aa9.09□□□□□ -0.95
COL4A6-206ENST00000477085 PHF5AQ7RTV0 110 aaKnown RBP9.09□□□□□ -0.95
COL4A6-206ENST00000477085 LINC00474Q9P2X8 69 aa9.09□□□□□ -0.95
COL4A6-206ENST00000477085 PKIGQ9Y2B9 76 aa9.09□□□□□ -0.95
COL4A6-206ENST00000477085 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-206ENST00000477085 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
COL4A6-206ENST00000477085 SPRR1AP35321 89 aa9.07□□□□□ -0.96
COL4A6-206ENST00000477085 ELOF1P60002 83 aaKnown RBP9.07□□□□□ -0.96
COL4A6-206ENST00000477085 TRBV7-6A0A0J9YX20 115 aa9.07□□□□□ -0.96
COL4A6-206ENST00000477085 COX7BP24311 80 aa9.06□□□□□ -0.96
COL4A6-206ENST00000477085 PRYO14603 147 aa9.05□□□□□ -0.96
COL4A6-206ENST00000477085 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
COL4A6-206ENST00000477085 DPH3Q96FX2 82 aa9.05□□□□□ -0.96
COL4A6-206ENST00000477085 FAM30AQ9NZY2 134 aa9.04□□□□□ -0.96
COL4A6-206ENST00000477085 A0A1B0GX51 115 aa9.03□□□□□ -0.96
COL4A6-206ENST00000477085 B5MCH6 92 aa9.03□□□□□ -0.96
COL4A6-206ENST00000477085 BAALC-AS2P0C853 105 aa9.03□□□□□ -0.96
COL4A6-206ENST00000477085 hADV29S1A0JD25 119 aa9.02□□□□□ -0.97
COL4A6-206ENST00000477085 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
COL4A6-206ENST00000477085 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
COL4A6-206ENST00000477085 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
COL4A6-206ENST00000477085 Q9BRP9 147 aa9.01□□□□□ -0.97
COL4A6-206ENST00000477085 DNAL4O96015 105 aa9□□□□□ -0.97
COL4A6-206ENST00000477085 Q6ZRX8 168 aa9□□□□□ -0.97
COL4A6-206ENST00000477085 TEX49A0A1B0GTD5 131 aa8.99□□□□□ -0.97
COL4A6-206ENST00000477085 UBE2BP63146 152 aa8.99□□□□□ -0.97
COL4A6-206ENST00000477085 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
COL4A6-206ENST00000477085 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
COL4A6-206ENST00000477085 Q6ZQY7 126 aa8.98□□□□□ -0.97
COL4A6-206ENST00000477085 Q6ZSA8 131 aa8.97□□□□□ -0.97
COL4A6-206ENST00000477085 LINC00336Q6ZUF6 198 aa8.97□□□□□ -0.97
COL4A6-206ENST00000477085 CDIP1Q9H305 208 aa8.97□□□□□ -0.97
COL4A6-206ENST00000477085 ORMDL1Q9P0S3 153 aa8.97□□□□□ -0.97
COL4A6-206ENST00000477085 A0A1B0GVY2 172 aa8.96□□□□□ -0.97
COL4A6-206ENST00000477085 ERC2-IT1O76042 136 aa8.96□□□□□ -0.98
COL4A6-206ENST00000477085 INAFM2P0DMQ5 153 aa8.95□□□□□ -0.98
COL4A6-206ENST00000477085 RYR3Q15413 4870 aa8.95□□□□□ -0.98
COL4A6-206ENST00000477085 PRLHP81277 87 aa8.94□□□□□ -0.98
COL4A6-206ENST00000477085 CIRBP-AS1Q8TBR5 109 aa8.94□□□□□ -0.98
COL4A6-206ENST00000477085 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
COL4A6-206ENST00000477085 SNCGO76070 127 aa8.94□□□□□ -0.98
COL4A6-206ENST00000477085 HAMPP81172 84 aa8.94□□□□□ -0.98
COL4A6-206ENST00000477085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.94□□□□□ -0.98
COL4A6-206ENST00000477085 FAM19A1Q7Z5A9 133 aa8.94□□□□□ -0.98
COL4A6-206ENST00000477085 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
COL4A6-206ENST00000477085 DHRS4-AS1Q9P1J3 65 aa8.93□□□□□ -0.98
COL4A6-206ENST00000477085 SCXQ7RTU7 201 aa8.92□□□□□ -0.98
COL4A6-206ENST00000477085 SIGMAR1Q99720 223 aa8.92□□□□□ -0.98
COL4A6-206ENST00000477085 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
COL4A6-206ENST00000477085 LINC01547P58512 204 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-206ENST00000477085 ST20-AS1Q8NBB2 130 aa8.91□□□□□ -0.98
COL4A6-206ENST00000477085 SRRM2Q9UQ35 2752 aaKnown RBP8.91□□□□□ -0.98
COL4A6-206ENST00000477085 PCP4P48539 62 aa8.91□□□□□ -0.98
COL4A6-206ENST00000477085 KRTAP13-1Q8IUC0 172 aa8.91□□□□□ -0.98
COL4A6-206ENST00000477085 OBSCN-AS1Q96MR7 158 aa8.91□□□□□ -0.98
COL4A6-206ENST00000477085 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.98
COL4A6-206ENST00000477085 BCE1O60756 84 aa8.9□□□□□ -0.98
COL4A6-206ENST00000477085 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
COL4A6-206ENST00000477085 FAM240AA0A1B0GVK7 77 aa8.89□□□□□ -0.99
COL4A6-206ENST00000477085 H0Y9J4 135 aa8.89□□□□□ -0.99
COL4A6-206ENST00000477085 Q8N377 158 aa8.89□□□□□ -0.99
COL4A6-206ENST00000477085 A0A1B0GV72 72 aa8.88□□□□□ -0.99
COL4A6-206ENST00000477085 XGP55808 180 aa8.88□□□□□ -0.99
COL4A6-206ENST00000477085 DEFB105AQ8NG35 78 aa8.88□□□□□ -0.99
COL4A6-206ENST00000477085 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
COL4A6-206ENST00000477085 IGLV5-48A0A075B6I7 105 aa8.85□□□□□ -0.99
COL4A6-206ENST00000477085 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
COL4A6-206ENST00000477085 UBE2AP49459 152 aa8.85□□□□□ -0.99
COL4A6-206ENST00000477085 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
COL4A6-206ENST00000477085 SCGB1A1P11684 91 aa8.84□□□□□ -1
COL4A6-206ENST00000477085 C14orf132Q9NPU4 83 aa8.84□□□□□ -1
COL4A6-206ENST00000477085 H3BQ85 93 aa8.83□□□□□ -1
COL4A6-206ENST00000477085 C3orf22Q8N5N4 141 aa8.83□□□□□ -1
COL4A6-206ENST00000477085 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
COL4A6-206ENST00000477085 C21orf62-AS1Q17RA5 79 aa8.82□□□□□ -1
COL4A6-206ENST00000477085 LAMTOR3Q9UHA4 124 aa8.82□□□□□ -1
COL4A6-206ENST00000477085 JMJD7-PLA2G4BH0Y9G9 81 aa8.81□□□□□ -1
COL4A6-206ENST00000477085 ACYP1P07311 99 aa8.81□□□□□ -1
COL4A6-206ENST00000477085 SMIM29Q86T20 159 aa8.81□□□□□ -1
COL4A6-206ENST00000477085 APOBP04114 4563 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms