RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 HIST1H2BCP62807 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HERV-K104P63124 156 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST2H2BEQ16778 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 PCOTHQ58A44 107 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.04□□□□□ -1.76
PRPF3-205ENST00000476970 FAM19A1Q7Z5A9 133 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 Q8NBF4 154 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BHQ93079 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BNQ99877 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 HIST1H2BMQ99879 126 aa4.04□□□□□ -1.76
PRPF3-205ENST00000476970 TMEM223A0PJW6 202 aa4.03□□□□□ -1.76
PRPF3-205ENST00000476970 SCO1O75880 301 aa4.03□□□□□ -1.76
PRPF3-205ENST00000476970 NMUP48645 174 aa4.03□□□□□ -1.76
PRPF3-205ENST00000476970 COA6Q5JTJ3 125 aaKnown RBP4.03□□□□□ -1.76
PRPF3-205ENST00000476970 PLEKHB2Q96CS7 222 aa4.03□□□□□ -1.76
PRPF3-205ENST00000476970 ZNF706Q9Y5V0 76 aaPredicted RBP4.03□□□□□ -1.76
PRPF3-205ENST00000476970 IGLV5-37A0A075B6J1 123 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 IGKV2-28A0A075B6P5 120 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 MYMXA0A1B0GTQ4 84 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 C20orf202A1L168 122 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 H0Y8G0 127 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 SLC25A20O43772 301 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 ATP6V1G1O75348 118 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 IGKV2D-28P01615 120 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 IGKCP01834 107 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 FABP4P15090 132 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 RPL24P83731 157 aaKnown RBP4.02□□□□□ -1.77
PRPF3-205ENST00000476970 PET117Q6UWS5 81 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 ERG28Q9UKR5 140 aa4.02□□□□□ -1.77
PRPF3-205ENST00000476970 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
PRPF3-205ENST00000476970 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
PRPF3-205ENST00000476970 TMEM126AQ9H061 195 aa4.01□□□□□ -1.77
PRPF3-205ENST00000476970 SYS1-DBNDD2H3BUS1 97 aa4□□□□□ -1.77
PRPF3-205ENST00000476970 LEPROTO15243 131 aa4□□□□□ -1.77
PRPF3-205ENST00000476970 LGALS3P17931 250 aaKnown RBP4□□□□□ -1.77
PRPF3-205ENST00000476970 MEIG1Q5JSS6 88 aa4□□□□□ -1.77
PRPF3-205ENST00000476970 Q8N377 158 aa4□□□□□ -1.77
PRPF3-205ENST00000476970 SPRR4Q96PI1 79 aa4□□□□□ -1.77
PRPF3-205ENST00000476970 HIGD2AQ9BW72 106 aa4□□□□□ -1.77
PRPF3-205ENST00000476970 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
PRPF3-205ENST00000476970 S100A6P06703 90 aa3.99□□□□□ -1.77
PRPF3-205ENST00000476970 PFN2P35080 140 aa3.99□□□□□ -1.77
PRPF3-205ENST00000476970 S100A12P80511 92 aa3.99□□□□□ -1.77
PRPF3-205ENST00000476970 LINC01545Q5VT33 79 aa3.99□□□□□ -1.77
PRPF3-205ENST00000476970 J3QQQ9 107 aa3.98□□□□□ -1.77
PRPF3-205ENST00000476970 S100A2P29034 98 aa3.98□□□□□ -1.77
PRPF3-205ENST00000476970 LINC00158P58513 81 aa3.98□□□□□ -1.77
PRPF3-205ENST00000476970 SNRPEP62304 92 aaKnown RBP3.98□□□□□ -1.77
PRPF3-205ENST00000476970 MIEN1Q9BRT3 115 aa3.98□□□□□ -1.77
PRPF3-205ENST00000476970 CBY1Q9Y3M2 126 aa3.98□□□□□ -1.77
PRPF3-205ENST00000476970 TMEM238C9JI98 176 aa3.97□□□□□ -1.77
PRPF3-205ENST00000476970 E9PLD3 99 aa3.97□□□□□ -1.77
PRPF3-205ENST00000476970 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
PRPF3-205ENST00000476970 COPS9Q8WXC6 57 aa3.97□□□□□ -1.77
PRPF3-205ENST00000476970 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
PRPF3-205ENST00000476970 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
PRPF3-205ENST00000476970 M0R378 163 aa3.96□□□□□ -1.78
PRPF3-205ENST00000476970 C3orf79P0CE67 100 aa3.96□□□□□ -1.78
PRPF3-205ENST00000476970 KRTDAPP60985 99 aa3.96□□□□□ -1.78
PRPF3-205ENST00000476970 LOC107984156A0A0G2JMH3 177 aa3.95□□□□□ -1.78
PRPF3-205ENST00000476970 HSBP1L1C9JCN9 74 aa3.95□□□□□ -1.78
PRPF3-205ENST00000476970 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
PRPF3-205ENST00000476970 VPREB1P12018 145 aa3.95□□□□□ -1.78
PRPF3-205ENST00000476970 ARL17AQ8IVW1 177 aa3.95□□□□□ -1.78
PRPF3-205ENST00000476970 MIR7-3HGQ8N6C7 128 aa3.95□□□□□ -1.78
PRPF3-205ENST00000476970 TRBV10-2A0A0K0K1G8 114 aa3.94□□□□□ -1.78
PRPF3-205ENST00000476970 TIMM17BO60830 172 aa3.94□□□□□ -1.78
PRPF3-205ENST00000476970 MOBPQ13875 183 aa3.94□□□□□ -1.78
PRPF3-205ENST00000476970 SSBP3-AS1Q7Z2R9 100 aa3.94□□□□□ -1.78
PRPF3-205ENST00000476970 BOD1L2Q8IYS8 172 aa3.94□□□□□ -1.78
PRPF3-205ENST00000476970 PMCHL2Q9BQD1 86 aa3.94□□□□□ -1.78
PRPF3-205ENST00000476970 A0A0J9YXY3 114 aa3.93□□□□□ -1.78
PRPF3-205ENST00000476970 NDUFC2O95298 119 aa3.93□□□□□ -1.78
PRPF3-205ENST00000476970 TSPEAR-AS2P59090 65 aa3.93□□□□□ -1.78
PRPF3-205ENST00000476970 Q6ZVH6 145 aa3.93□□□□□ -1.78
PRPF3-205ENST00000476970 HIST3H2BBQ8N257 126 aa3.93□□□□□ -1.78
PRPF3-205ENST00000476970 SPANXB1Q9NS25 103 aaPredicted RBP3.93□□□□□ -1.78
PRPF3-205ENST00000476970 IGLV9-49A0A0B4J1Y8 123 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 A0A0U1RRA0 63 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 C9orf92A6NGG3 77 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 ZNF815PA8K554 130 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 PRYO14603 147 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 LINC00483Q53H64 154 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 SCGB1D4Q6XE38 83 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 HIST1H2BLQ99880 126 aa3.92□□□□□ -1.78
PRPF3-205ENST00000476970 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
PRPF3-205ENST00000476970 LINC00518Q8N0U6 118 aa3.91□□□□□ -1.78
PRPF3-205ENST00000476970 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
PRPF3-205ENST00000476970 IFITM1P13164 125 aa3.9□□□□□ -1.79
PRPF3-205ENST00000476970 S100A7L2Q5SY68 101 aa3.9□□□□□ -1.79
PRPF3-205ENST00000476970 LIMD2Q9BT23 127 aa3.9□□□□□ -1.79
PRPF3-205ENST00000476970 KCNQ1DNQ9H478 68 aa3.9□□□□□ -1.79
PRPF3-205ENST00000476970 ETDCA0A1B0GVM5 59 aa3.89□□□□□ -1.79
PRPF3-205ENST00000476970 C5orf52A6NGY3 159 aa3.89□□□□□ -1.79
PRPF3-205ENST00000476970 IGLV6-57P01721 117 aa3.89□□□□□ -1.79
PRPF3-205ENST00000476970 DDTP30046 118 aa3.89□□□□□ -1.79
PRPF3-205ENST00000476970 HINT1P49773 126 aaPredicted RBP3.89□□□□□ -1.79
PRPF3-205ENST00000476970 JOSD1Q15040 202 aaPredicted RBP3.89□□□□□ -1.79
PRPF3-205ENST00000476970 GAGE2AQ6NT46 116 aa3.89□□□□□ -1.79
PRPF3-205ENST00000476970 Q6Q795 121 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 586.9 ms