RNA–Protein interactions for RNA: ENST00000476930.1

PTPRN-213, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-213ENST00000476930 SOSTDC1Q6X4U4 206 aa6.41□□□□□ -1.38
PTPRN-213ENST00000476930 ZNF706Q9Y5V0 76 aaPredicted RBP6.41□□□□□ -1.38
PTPRN-213ENST00000476930 E9PLD3 99 aa6.4□□□□□ -1.38
PTPRN-213ENST00000476930 SYS1-DBNDD2H3BUS1 97 aa6.4□□□□□ -1.38
PTPRN-213ENST00000476930 ERC2-IT1O76042 136 aa6.4□□□□□ -1.38
PTPRN-213ENST00000476930 SPANXB1Q9NS25 103 aaPredicted RBP6.4□□□□□ -1.38
PTPRN-213ENST00000476930 Q9BRP9 147 aa6.39□□□□□ -1.39
PTPRN-213ENST00000476930 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
PTPRN-213ENST00000476930 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 NDUFC2O95298 119 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 IGLV6-57P01721 117 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 CTAG1AP78358 180 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 S100A12P80511 92 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 LINC00483Q53H64 154 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 GAGE2AQ6NT46 116 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 Q8NBF4 154 aa6.38□□□□□ -1.39
PTPRN-213ENST00000476930 S100A7L2Q5SY68 101 aa6.37□□□□□ -1.39
PTPRN-213ENST00000476930 LINC01545Q5VT33 79 aa6.37□□□□□ -1.39
PTPRN-213ENST00000476930 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
PTPRN-213ENST00000476930 Q6ZRX8 168 aa6.37□□□□□ -1.39
PTPRN-213ENST00000476930 LITAFQ99732 161 aa6.36□□□□□ -1.39
PTPRN-213ENST00000476930 TRAV23DV6A0A075B6W5 121 aa6.35□□□□□ -1.39
PTPRN-213ENST00000476930 TPRXLQ17RH7 258 aa6.35□□□□□ -1.39
PTPRN-213ENST00000476930 PET117Q6UWS5 81 aa6.35□□□□□ -1.39
PTPRN-213ENST00000476930 TTTY13Q9BZ97 58 aa6.35□□□□□ -1.39
PTPRN-213ENST00000476930 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
PTPRN-213ENST00000476930 C3orf79P0CE67 100 aa6.34□□□□□ -1.39
PTPRN-213ENST00000476930 MOBPQ13875 183 aa6.34□□□□□ -1.39
PTPRN-213ENST00000476930 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
PTPRN-213ENST00000476930 ZNF73O43830 326 aaPredicted RBP6.33□□□□□ -1.4
PTPRN-213ENST00000476930 ZNF815PA8K554 130 aa6.32□□□□□ -1.4
PTPRN-213ENST00000476930 H3BS24 57 aa6.32□□□□□ -1.4
PTPRN-213ENST00000476930 TIMM17BO60830 172 aa6.32□□□□□ -1.4
PTPRN-213ENST00000476930 COA6Q5JTJ3 125 aaKnown RBP6.32□□□□□ -1.4
PTPRN-213ENST00000476930 ST20-AS1Q8NBB2 130 aa6.32□□□□□ -1.4
PTPRN-213ENST00000476930 SPINK1P00995 79 aa6.31□□□□□ -1.4
PTPRN-213ENST00000476930 KRTDAPP60985 99 aa6.31□□□□□ -1.4
PTPRN-213ENST00000476930 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
PTPRN-213ENST00000476930 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
PTPRN-213ENST00000476930 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
PTPRN-213ENST00000476930 FP248Q71RG6 208 aaPredicted RBP6.3□□□□□ -1.4
PTPRN-213ENST00000476930 SSBP3-AS1Q7Z2R9 100 aa6.3□□□□□ -1.4
PTPRN-213ENST00000476930 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
PTPRN-213ENST00000476930 HINT1P49773 126 aaPredicted RBP6.27□□□□□ -1.41
PTPRN-213ENST00000476930 C9orf153Q5TBE3 101 aa6.27□□□□□ -1.41
PTPRN-213ENST00000476930 ATOH7Q8N100 152 aa6.27□□□□□ -1.41
PTPRN-213ENST00000476930 Q8N377 158 aa6.27□□□□□ -1.41
PTPRN-213ENST00000476930 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
PTPRN-213ENST00000476930 A0A0U1RQV1 116 aa6.26□□□□□ -1.41
PTPRN-213ENST00000476930 CBY1Q9Y3M2 126 aa6.26□□□□□ -1.41
PTPRN-213ENST00000476930 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
PTPRN-213ENST00000476930 C6orf99Q4VX62 202 aa6.25□□□□□ -1.41
PTPRN-213ENST00000476930 SCGB1D4Q6XE38 83 aa6.25□□□□□ -1.41
PTPRN-213ENST00000476930 PCP2Q8IVA1 136 aa6.25□□□□□ -1.41
PTPRN-213ENST00000476930 C20orf202A1L168 122 aa6.24□□□□□ -1.41
PTPRN-213ENST00000476930 C5orf52A6NGY3 159 aa6.24□□□□□ -1.41
PTPRN-213ENST00000476930 SPRR1BP22528 89 aa6.24□□□□□ -1.41
PTPRN-213ENST00000476930 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
PTPRN-213ENST00000476930 LINC00518Q8N0U6 118 aa6.24□□□□□ -1.41
PTPRN-213ENST00000476930 DHRS4-AS1Q9P1J3 65 aa6.24□□□□□ -1.41
PTPRN-213ENST00000476930 SLC25A20O43772 301 aa6.23□□□□□ -1.41
PTPRN-213ENST00000476930 COX7BP24311 80 aa6.23□□□□□ -1.41
PTPRN-213ENST00000476930 MUSTN1Q8IVN3 82 aa6.22□□□□□ -1.41
PTPRN-213ENST00000476930 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.42
PTPRN-213ENST00000476930 A6NDN8 102 aa6.2□□□□□ -1.42
PTPRN-213ENST00000476930 IFITM1P13164 125 aa6.2□□□□□ -1.42
PTPRN-213ENST00000476930 DEFB105AQ8NG35 78 aa6.2□□□□□ -1.42
PTPRN-213ENST00000476930 TAL2Q16559 108 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 Q1RN00 199 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 ASB16-AS1Q495Z4 193 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 SLC25A34Q6PIV7 304 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 Q6ZVH6 145 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 HIST3H2BBQ8N257 126 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 KRTAP4-1Q9BYQ7 146 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 LAMTOR3Q9UHA4 124 aa6.19□□□□□ -1.42
PTPRN-213ENST00000476930 TRBV7-6A0A0J9YX20 115 aa6.18□□□□□ -1.42
PTPRN-213ENST00000476930 COPS9Q8WXC6 57 aa6.18□□□□□ -1.42
PTPRN-213ENST00000476930 HIST1H2BLQ99880 126 aa6.18□□□□□ -1.42
PTPRN-213ENST00000476930 A0A1B0GWB2 263 aa6.17□□□□□ -1.42
PTPRN-213ENST00000476930 AKR1D1P51857 326 aa6.17□□□□□ -1.42
PTPRN-213ENST00000476930 LINC01547P58512 204 aaPredicted RBP6.17□□□□□ -1.42
PTPRN-213ENST00000476930 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
PTPRN-213ENST00000476930 TEX49A0A1B0GTD5 131 aa6.16□□□□□ -1.42
PTPRN-213ENST00000476930 SNRPEP62304 92 aaKnown RBP6.16□□□□□ -1.42
PTPRN-213ENST00000476930 SMIM11BQ8TCY0 68 aa6.16□□□□□ -1.42
PTPRN-213ENST00000476930 S100A2P29034 98 aa6.15□□□□□ -1.42
PTPRN-213ENST00000476930 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.42
PTPRN-213ENST00000476930 XP32Q5T750 250 aa6.15□□□□□ -1.42
PTPRN-213ENST00000476930 IGLV5-48A0A075B6I7 105 aa6.14□□□□□ -1.43
PTPRN-213ENST00000476930 TRAV13-2A0A0B4J235 113 aa6.14□□□□□ -1.43
PTPRN-213ENST00000476930 A0A0G2JQZ4 141 aa6.14□□□□□ -1.43
PTPRN-213ENST00000476930 LIMD2Q9BT23 127 aa6.14□□□□□ -1.43
PTPRN-213ENST00000476930 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
PTPRN-213ENST00000476930 H7C2G1 150 aa6.13□□□□□ -1.43
PTPRN-213ENST00000476930 A4D1N5 150 aa6.12□□□□□ -1.43
PTPRN-213ENST00000476930 CD164Q04900 197 aa6.12□□□□□ -1.43
PTPRN-213ENST00000476930 C9orf92A6NGG3 77 aa6.11□□□□□ -1.43
PTPRN-213ENST00000476930 HSBP1L1C9JCN9 74 aa6.11□□□□□ -1.43
PTPRN-213ENST00000476930 S100A1P23297 94 aa6.11□□□□□ -1.43
PTPRN-213ENST00000476930 S100A6P06703 90 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms