RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 HIST1H2BOP23527 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST1H2BBP33778 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST1H2BDP58876 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST1H2BCP62807 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST2H2BEQ16778 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.08□□□□□ -1.28
SSR1-205ENST00000475213 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST1H2BHQ93079 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST1H2BNQ99877 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 HIST1H2BMQ99879 126 aa7.08□□□□□ -1.28
SSR1-205ENST00000475213 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
SSR1-205ENST00000475213 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
SSR1-205ENST00000475213 DDTP30046 118 aa7.07□□□□□ -1.28
SSR1-205ENST00000475213 E9PLD3 99 aa7.06□□□□□ -1.28
SSR1-205ENST00000475213 SYS1-DBNDD2H3BUS1 97 aa7.06□□□□□ -1.28
SSR1-205ENST00000475213 CTAG1AP78358 180 aa7.06□□□□□ -1.28
SSR1-205ENST00000475213 S100A12P80511 92 aa7.06□□□□□ -1.28
SSR1-205ENST00000475213 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
SSR1-205ENST00000475213 A0A0J9YXY3 114 aa7.05□□□□□ -1.28
SSR1-205ENST00000475213 B5MCH6 92 aa7.05□□□□□ -1.28
SSR1-205ENST00000475213 NDUFC2O95298 119 aa7.05□□□□□ -1.28
SSR1-205ENST00000475213 SPANXB1Q9NS25 103 aaPredicted RBP7.05□□□□□ -1.28
SSR1-205ENST00000475213 ADAMTSL4-AS1Q5T5F5 129 aa7.04□□□□□ -1.28
SSR1-205ENST00000475213 SOSTDC1Q6X4U4 206 aa7.04□□□□□ -1.28
SSR1-205ENST00000475213 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
SSR1-205ENST00000475213 MUC2Q02817 5179 aa7.04□□□□□ -1.28
SSR1-205ENST00000475213 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
SSR1-205ENST00000475213 NPC2P61916 151 aa7.03□□□□□ -1.28
SSR1-205ENST00000475213 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
SSR1-205ENST00000475213 LINC01545Q5VT33 79 aa7.03□□□□□ -1.28
SSR1-205ENST00000475213 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
SSR1-205ENST00000475213 ERC2-IT1O76042 136 aa7.02□□□□□ -1.29
SSR1-205ENST00000475213 S100A7L2Q5SY68 101 aa7.02□□□□□ -1.29
SSR1-205ENST00000475213 Q6ZRX8 168 aa7.02□□□□□ -1.29
SSR1-205ENST00000475213 Q9BRP9 147 aa7.02□□□□□ -1.29
SSR1-205ENST00000475213 GAGE2AQ6NT46 116 aa7.01□□□□□ -1.29
SSR1-205ENST00000475213 PET117Q6UWS5 81 aa7.01□□□□□ -1.29
SSR1-205ENST00000475213 Q8NBF4 154 aa7.01□□□□□ -1.29
SSR1-205ENST00000475213 IGLV7-46A0A075B6I9 117 aa7□□□□□ -1.29
SSR1-205ENST00000475213 TRAV23DV6A0A075B6W5 121 aa7□□□□□ -1.29
SSR1-205ENST00000475213 TPRXLQ17RH7 258 aa7□□□□□ -1.29
SSR1-205ENST00000475213 LITAFQ99732 161 aa7□□□□□ -1.29
SSR1-205ENST00000475213 C3orf79P0CE67 100 aa6.99□□□□□ -1.29
SSR1-205ENST00000475213 ZNF73O43830 326 aaPredicted RBP6.98□□□□□ -1.29
SSR1-205ENST00000475213 TIMM17BO60830 172 aa6.98□□□□□ -1.29
SSR1-205ENST00000475213 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
SSR1-205ENST00000475213 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
SSR1-205ENST00000475213 ZNF815PA8K554 130 aa6.97□□□□□ -1.29
SSR1-205ENST00000475213 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
SSR1-205ENST00000475213 COA6Q5JTJ3 125 aaKnown RBP6.97□□□□□ -1.29
SSR1-205ENST00000475213 TTTY13Q9BZ97 58 aa6.97□□□□□ -1.29
SSR1-205ENST00000475213 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
SSR1-205ENST00000475213 SPANXCQ9NY87 97 aa6.97□□□□□ -1.29
SSR1-205ENST00000475213 SPINK1P00995 79 aa6.96□□□□□ -1.3
SSR1-205ENST00000475213 MOBPQ13875 183 aa6.96□□□□□ -1.3
SSR1-205ENST00000475213 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
SSR1-205ENST00000475213 KRTDAPP60985 99 aa6.95□□□□□ -1.3
SSR1-205ENST00000475213 SSBP3-AS1Q7Z2R9 100 aa6.95□□□□□ -1.3
SSR1-205ENST00000475213 FP248Q71RG6 208 aaPredicted RBP6.94□□□□□ -1.3
SSR1-205ENST00000475213 OR13C6PQ8NH95 151 aa6.94□□□□□ -1.3
SSR1-205ENST00000475213 CBY1Q9Y3M2 126 aa6.94□□□□□ -1.3
SSR1-205ENST00000475213 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
SSR1-205ENST00000475213 ST20-AS1Q8NBB2 130 aa6.93□□□□□ -1.3
SSR1-205ENST00000475213 SPANXDQ9BXN6 97 aa6.92□□□□□ -1.3
SSR1-205ENST00000475213 A0A0U1RQV1 116 aa6.91□□□□□ -1.3
SSR1-205ENST00000475213 C20orf202A1L168 122 aa6.91□□□□□ -1.3
SSR1-205ENST00000475213 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
SSR1-205ENST00000475213 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
SSR1-205ENST00000475213 C9orf153Q5TBE3 101 aa6.9□□□□□ -1.3
SSR1-205ENST00000475213 SCGB1D4Q6XE38 83 aa6.9□□□□□ -1.3
SSR1-205ENST00000475213 LINC00518Q8N0U6 118 aa6.9□□□□□ -1.3
SSR1-205ENST00000475213 ATOH7Q8N100 152 aa6.9□□□□□ -1.3
SSR1-205ENST00000475213 Q8N377 158 aa6.9□□□□□ -1.3
SSR1-205ENST00000475213 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
SSR1-205ENST00000475213 DHRS4-AS1Q9P1J3 65 aa6.89□□□□□ -1.31
SSR1-205ENST00000475213 ELOF1P60002 83 aaKnown RBP6.88□□□□□ -1.31
SSR1-205ENST00000475213 SPRR1BP22528 89 aa6.87□□□□□ -1.31
SSR1-205ENST00000475213 COX7BP24311 80 aa6.87□□□□□ -1.31
SSR1-205ENST00000475213 C6orf99Q4VX62 202 aa6.87□□□□□ -1.31
SSR1-205ENST00000475213 SLC25A20O43772 301 aa6.86□□□□□ -1.31
SSR1-205ENST00000475213 IFITM1P13164 125 aa6.86□□□□□ -1.31
SSR1-205ENST00000475213 PCP2Q8IVA1 136 aa6.86□□□□□ -1.31
SSR1-205ENST00000475213 COPS9Q8WXC6 57 aa6.86□□□□□ -1.31
SSR1-205ENST00000475213 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
SSR1-205ENST00000475213 AKR1D1P51857 326 aa6.85□□□□□ -1.31
SSR1-205ENST00000475213 SLC25A34Q6PIV7 304 aa6.85□□□□□ -1.31
SSR1-205ENST00000475213 Q6ZVH6 145 aa6.85□□□□□ -1.31
SSR1-205ENST00000475213 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.31
SSR1-205ENST00000475213 TRBV7-6A0A0J9YX20 115 aa6.83□□□□□ -1.32
SSR1-205ENST00000475213 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
SSR1-205ENST00000475213 A6NDN8 102 aa6.82□□□□□ -1.32
SSR1-205ENST00000475213 SNRPEP62304 92 aaKnown RBP6.82□□□□□ -1.32
SSR1-205ENST00000475213 TAL2Q16559 108 aa6.82□□□□□ -1.32
SSR1-205ENST00000475213 HIST3H2BBQ8N257 126 aa6.82□□□□□ -1.32
SSR1-205ENST00000475213 KRTAP3-1Q9BYR8 98 aa6.82□□□□□ -1.32
SSR1-205ENST00000475213 A0A1B0GWB2 263 aa6.81□□□□□ -1.32
SSR1-205ENST00000475213 ASB16-AS1Q495Z4 193 aa6.81□□□□□ -1.32
SSR1-205ENST00000475213 HRCT1Q6UXD1 115 aa6.81□□□□□ -1.32
SSR1-205ENST00000475213 DEFB105AQ8NG35 78 aa6.81□□□□□ -1.32
SSR1-205ENST00000475213 HIST1H2BLQ99880 126 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms