RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 Q6ZRX8 168 aa9.38□□□□□ -0.91
CPA4-205ENST00000474254 TIMM17BO60830 172 aa9.37□□□□□ -0.91
CPA4-205ENST00000474254 LINC00483Q53H64 154 aa9.37□□□□□ -0.91
CPA4-205ENST00000474254 CDIP1Q9H305 208 aa9.37□□□□□ -0.91
CPA4-205ENST00000474254 TRAV23DV6A0A075B6W5 121 aa9.36□□□□□ -0.91
CPA4-205ENST00000474254 Q9BRP9 147 aa9.36□□□□□ -0.91
CPA4-205ENST00000474254 PPDPFQ9H3Y8 114 aa9.36□□□□□ -0.91
CPA4-205ENST00000474254 ZNF815PA8K554 130 aa9.35□□□□□ -0.91
CPA4-205ENST00000474254 ERC2-IT1O76042 136 aa9.35□□□□□ -0.91
CPA4-205ENST00000474254 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
CPA4-205ENST00000474254 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
CPA4-205ENST00000474254 KRTDAPP60985 99 aa9.34□□□□□ -0.91
CPA4-205ENST00000474254 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
CPA4-205ENST00000474254 TTTY13Q9BZ97 58 aa9.34□□□□□ -0.91
CPA4-205ENST00000474254 IGLV7-46A0A075B6I9 117 aa9.33□□□□□ -0.92
CPA4-205ENST00000474254 ZNF73O43830 326 aaPredicted RBP9.33□□□□□ -0.92
CPA4-205ENST00000474254 TPRXLQ17RH7 258 aa9.33□□□□□ -0.92
CPA4-205ENST00000474254 GAGE2AQ6NT46 116 aa9.32□□□□□ -0.92
CPA4-205ENST00000474254 Q8NBF4 154 aa9.32□□□□□ -0.92
CPA4-205ENST00000474254 C20orf202A1L168 122 aa9.31□□□□□ -0.92
CPA4-205ENST00000474254 JOSD1Q15040 202 aaPredicted RBP9.31□□□□□ -0.92
CPA4-205ENST00000474254 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
CPA4-205ENST00000474254 CBY1Q9Y3M2 126 aa9.31□□□□□ -0.92
CPA4-205ENST00000474254 C4orf48Q5BLP8 95 aa9.29□□□□□ -0.92
CPA4-205ENST00000474254 MOBPQ13875 183 aa9.28□□□□□ -0.92
CPA4-205ENST00000474254 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
CPA4-205ENST00000474254 IGLV9-49A0A0B4J1Y8 123 aa9.27□□□□□ -0.93
CPA4-205ENST00000474254 OR13C6PQ8NH95 151 aa9.27□□□□□ -0.93
CPA4-205ENST00000474254 SPANXDQ9BXN6 97 aa9.27□□□□□ -0.93
CPA4-205ENST00000474254 SPINK1P00995 79 aa9.26□□□□□ -0.93
CPA4-205ENST00000474254 HINT1P49773 126 aaPredicted RBP9.26□□□□□ -0.93
CPA4-205ENST00000474254 AKR1D1P51857 326 aa9.25□□□□□ -0.93
CPA4-205ENST00000474254 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
CPA4-205ENST00000474254 FP248Q71RG6 208 aaPredicted RBP9.25□□□□□ -0.93
CPA4-205ENST00000474254 ATOH7Q8N100 152 aa9.25□□□□□ -0.93
CPA4-205ENST00000474254 C5orf52A6NGY3 159 aa9.24□□□□□ -0.93
CPA4-205ENST00000474254 SSBP3-AS1Q7Z2R9 100 aa9.24□□□□□ -0.93
CPA4-205ENST00000474254 LINC00518Q8N0U6 118 aa9.24□□□□□ -0.93
CPA4-205ENST00000474254 ST20-AS1Q8NBB2 130 aa9.23□□□□□ -0.93
CPA4-205ENST00000474254 RPS29P62273 56 aaKnown RBP9.22□□□□□ -0.93
CPA4-205ENST00000474254 PCP2Q8IVA1 136 aa9.21□□□□□ -0.94
CPA4-205ENST00000474254 COPS9Q8WXC6 57 aa9.21□□□□□ -0.94
CPA4-205ENST00000474254 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.94
CPA4-205ENST00000474254 IFITM1P13164 125 aa9.2□□□□□ -0.94
CPA4-205ENST00000474254 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
CPA4-205ENST00000474254 Q6ZVH6 145 aa9.2□□□□□ -0.94
CPA4-205ENST00000474254 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
CPA4-205ENST00000474254 SPRR1BP22528 89 aa9.19□□□□□ -0.94
CPA4-205ENST00000474254 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
CPA4-205ENST00000474254 C9orf153Q5TBE3 101 aa9.19□□□□□ -0.94
CPA4-205ENST00000474254 HIST1H2BLQ99880 126 aa9.19□□□□□ -0.94
CPA4-205ENST00000474254 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
CPA4-205ENST00000474254 S100A1P23297 94 aa9.18□□□□□ -0.94
CPA4-205ENST00000474254 SNRPEP62304 92 aaKnown RBP9.18□□□□□ -0.94
CPA4-205ENST00000474254 Q8N377 158 aa9.18□□□□□ -0.94
CPA4-205ENST00000474254 COX7BP24311 80 aa9.17□□□□□ -0.94
CPA4-205ENST00000474254 TRBV7-6A0A0J9YX20 115 aa9.15□□□□□ -0.94
CPA4-205ENST00000474254 S100A2P29034 98 aa9.15□□□□□ -0.94
CPA4-205ENST00000474254 KRTAP13-3Q3SY46 172 aa9.15□□□□□ -0.94
CPA4-205ENST00000474254 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
CPA4-205ENST00000474254 MUSTN1Q8IVN3 82 aa9.15□□□□□ -0.94
CPA4-205ENST00000474254 SLC25A20O43772 301 aa9.14□□□□□ -0.95
CPA4-205ENST00000474254 A0A1B0GWB2 263 aa9.12□□□□□ -0.95
CPA4-205ENST00000474254 A6NDN8 102 aa9.12□□□□□ -0.95
CPA4-205ENST00000474254 S100A6P06703 90 aa9.11□□□□□ -0.95
CPA4-205ENST00000474254 TRAV13-2A0A0B4J235 113 aa9.1□□□□□ -0.95
CPA4-205ENST00000474254 HSBP1L1C9JCN9 74 aa9.1□□□□□ -0.95
CPA4-205ENST00000474254 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
CPA4-205ENST00000474254 LINC01547P58512 204 aaPredicted RBP9.09□□□□□ -0.95
CPA4-205ENST00000474254 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
CPA4-205ENST00000474254 SEC61BP60468 96 aaKnown RBP9.08□□□□□ -0.96
CPA4-205ENST00000474254 TAL2Q16559 108 aa9.08□□□□□ -0.96
CPA4-205ENST00000474254 TEX49A0A1B0GTD5 131 aa9.07□□□□□ -0.96
CPA4-205ENST00000474254 A4D1N5 150 aa9.07□□□□□ -0.96
CPA4-205ENST00000474254 Q1RN00 199 aa9.07□□□□□ -0.96
CPA4-205ENST00000474254 SMIM11BQ8TCY0 68 aa9.07□□□□□ -0.96
CPA4-205ENST00000474254 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
CPA4-205ENST00000474254 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
CPA4-205ENST00000474254 LIMD2Q9BT23 127 aa9.05□□□□□ -0.96
CPA4-205ENST00000474254 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
CPA4-205ENST00000474254 HRCT1Q6UXD1 115 aa9.03□□□□□ -0.96
CPA4-205ENST00000474254 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
CPA4-205ENST00000474254 CD164Q04900 197 aa9.02□□□□□ -0.97
CPA4-205ENST00000474254 SCGB1D1O95968 90 aa9.01□□□□□ -0.97
CPA4-205ENST00000474254 PRO1933Q9H354 126 aa9.01□□□□□ -0.97
CPA4-205ENST00000474254 COX8AP10176 69 aa8.98□□□□□ -0.97
CPA4-205ENST00000474254 VAMP3Q15836 100 aa8.98□□□□□ -0.97
CPA4-205ENST00000474254 XP32Q5T750 250 aa8.98□□□□□ -0.97
CPA4-205ENST00000474254 KRTAP4-1Q9BYQ7 146 aa8.98□□□□□ -0.97
CPA4-205ENST00000474254 H7C2G1 150 aa8.97□□□□□ -0.97
CPA4-205ENST00000474254 Q5XG85 94 aa8.96□□□□□ -0.98
CPA4-205ENST00000474254 LINC00575Q6W349 94 aa8.96□□□□□ -0.98
CPA4-205ENST00000474254 HIST1H4GQ99525 98 aa8.96□□□□□ -0.98
CPA4-205ENST00000474254 DLEU1O43261 78 aa8.95□□□□□ -0.98
CPA4-205ENST00000474254 C12orf57Q99622 126 aa8.94□□□□□ -0.98
CPA4-205ENST00000474254 A0A0G2JQZ4 141 aa8.93□□□□□ -0.98
CPA4-205ENST00000474254 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
CPA4-205ENST00000474254 Q6ZQY7 126 aa8.93□□□□□ -0.98
CPA4-205ENST00000474254 hADV29S1A0JD25 119 aa8.92□□□□□ -0.98
CPA4-205ENST00000474254 F8WEM9 126 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms