RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 COX17Q14061 63 aa14.07□□□□□ -0.16
RNF220-209ENST00000474064 LINC00575Q6W349 94 aa14.06□□□□□ -0.16
RNF220-209ENST00000474064 LINC00474Q9P2X8 69 aa14.05□□□□□ -0.16
RNF220-209ENST00000474064 LOC110117498A0A087WWA1 95 aa14.05□□□□□ -0.16
RNF220-209ENST00000474064 ZNF561-AS1K7EIQ3 104 aa14.05□□□□□ -0.16
RNF220-209ENST00000474064 Q8NDZ9 215 aa14.05□□□□□ -0.16
RNF220-209ENST00000474064 LINC01556Q5JQF7 62 aa14.04□□□□□ -0.16
RNF220-209ENST00000474064 PKIGQ9Y2B9 76 aa14.04□□□□□ -0.16
RNF220-209ENST00000474064 KRTAP26-1Q6PEX3 210 aa14.04□□□□□ -0.16
RNF220-209ENST00000474064 IGKV2D-24A0A075B6R9 120 aa14.03□□□□□ -0.16
RNF220-209ENST00000474064 COL7A1Q02388 2944 aa14.02□□□□□ -0.17
RNF220-209ENST00000474064 LINC00588Q9Y4M8 146 aa14.01□□□□□ -0.17
RNF220-209ENST00000474064 TRBV7-6A0A0J9YX20 115 aa14.01□□□□□ -0.17
RNF220-209ENST00000474064 C6orf48Q9UBA6 75 aa14.01□□□□□ -0.17
RNF220-209ENST00000474064 SCXQ7RTU7 201 aa14□□□□□ -0.17
RNF220-209ENST00000474064 CXCL6P80162 114 aa13.99□□□□□ -0.17
RNF220-209ENST00000474064 STAB2Q8WWQ8 2551 aa13.99□□□□□ -0.17
RNF220-209ENST00000474064 CAMK2N2Q96S95 79 aa13.98□□□□□ -0.17
RNF220-209ENST00000474064 C15orf56Q8N910 161 aa13.98□□□□□ -0.17
RNF220-209ENST00000474064 Q6ZQY7 126 aa13.97□□□□□ -0.17
RNF220-209ENST00000474064 XAGE1AQ9HD64 81 aa13.97□□□□□ -0.17
RNF220-209ENST00000474064 DNAH10OSP0CZ25 163 aa13.96□□□□□ -0.17
RNF220-209ENST00000474064 TRBV7-4A0A0J9YYF1 115 aa13.96□□□□□ -0.18
RNF220-209ENST00000474064 DNAH9Q9NYC9 4486 aa13.95□□□□□ -0.18
RNF220-209ENST00000474064 NDUFC1O43677 76 aa13.94□□□□□ -0.18
RNF220-209ENST00000474064 BRK1Q8WUW1 75 aa13.94□□□□□ -0.18
RNF220-209ENST00000474064 Q6ZRU5 148 aa13.93□□□□□ -0.18
RNF220-209ENST00000474064 MUC7Q8TAX7 377 aa13.93□□□□□ -0.18
RNF220-209ENST00000474064 GVQW2A0A096LPI5 108 aaPredicted RBP13.92□□□□□ -0.18
RNF220-209ENST00000474064 PDE6GP18545 87 aa13.91□□□□□ -0.18
RNF220-209ENST00000474064 LYSTQ99698 3801 aa13.91□□□□□ -0.18
RNF220-209ENST00000474064 NREPQ16612 68 aa13.9□□□□□ -0.18
RNF220-209ENST00000474064 TMEM254Q8TBM7 123 aa13.89□□□□□ -0.19
RNF220-209ENST00000474064 A0A0U1RQV1 116 aa13.88□□□□□ -0.19
RNF220-209ENST00000474064 ATP5EP56381 51 aaPredicted RBP13.87□□□□□ -0.19
RNF220-209ENST00000474064 FAM229BQ4G0N7 80 aa13.87□□□□□ -0.19
RNF220-209ENST00000474064 MPLKIPQ8TAP9 179 aa13.87□□□□□ -0.19
RNF220-209ENST00000474064 CASC10Q5T4H9 136 aa13.87□□□□□ -0.19
RNF220-209ENST00000474064 BPY2O14599 106 aa13.86□□□□□ -0.19
RNF220-209ENST00000474064 IGLV6-57P01721 117 aa13.84□□□□□ -0.19
RNF220-209ENST00000474064 DNAH1Q9P2D7 4330 aa13.83□□□□□ -0.19
RNF220-209ENST00000474064 Q8N9L7 120 aa13.83□□□□□ -0.2
RNF220-209ENST00000474064 SYCNQ0VAF6 134 aa13.82□□□□□ -0.2
RNF220-209ENST00000474064 B9D2Q9BPU9 175 aa13.82□□□□□ -0.2
RNF220-209ENST00000474064 Q6ZRP5 223 aa13.8□□□□□ -0.2
RNF220-209ENST00000474064 F8WDY8 70 aa13.79□□□□□ -0.2
RNF220-209ENST00000474064 H3BQ85 93 aa13.77□□□□□ -0.21
RNF220-209ENST00000474064 C1orf195Q5TG92 126 aa13.77□□□□□ -0.21
RNF220-209ENST00000474064 DIRC1Q969H9 104 aa13.77□□□□□ -0.21
RNF220-209ENST00000474064 TENM2Q9NT68 2774 aa13.76□□□□□ -0.21
RNF220-209ENST00000474064 ERC2-IT1O76042 136 aa13.76□□□□□ -0.21
RNF220-209ENST00000474064 VPREB1P12018 145 aa13.76□□□□□ -0.21
RNF220-209ENST00000474064 PRYO14603 147 aa13.75□□□□□ -0.21
RNF220-209ENST00000474064 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.75□□□□□ -0.21
RNF220-209ENST00000474064 UBE2DNLQ8IWF7 75 aa13.75□□□□□ -0.21
RNF220-209ENST00000474064 DNHD1Q96M86 4753 aa13.75□□□□□ -0.21
RNF220-209ENST00000474064 CSMD3Q7Z407 3707 aa13.75□□□□□ -0.21
RNF220-209ENST00000474064 DNAH10Q8IVF4 4471 aa13.74□□□□□ -0.21
RNF220-209ENST00000474064 KRTAP1-5Q9BYS1 174 aa13.73□□□□□ -0.21
RNF220-209ENST00000474064 OCR1Q9BZK8 76 aa13.73□□□□□ -0.21
RNF220-209ENST00000474064 ZNF73O43830 326 aaPredicted RBP13.72□□□□□ -0.21
RNF220-209ENST00000474064 FUSP35637 526 aaKnown RBP eCLIP13.72□□□□□ -0.21
RNF220-209ENST00000474064 APLNQ9ULZ1 77 aa13.72□□□□□ -0.21
RNF220-209ENST00000474064 IGKV4-1P06312 121 aa13.71□□□□□ -0.21
RNF220-209ENST00000474064 COX7BP24311 80 aa13.71□□□□□ -0.21
RNF220-209ENST00000474064 V9GYY9 64 aa13.7□□□□□ -0.22
RNF220-209ENST00000474064 HIGD2AQ9BW72 106 aa13.7□□□□□ -0.22
RNF220-209ENST00000474064 PRKDCP78527 4128 aaKnown RBP13.69□□□□□ -0.22
RNF220-209ENST00000474064 DNAH7Q8WXX0 4024 aa13.69□□□□□ -0.22
RNF220-209ENST00000474064 PLECQ15149 4684 aaKnown RBP13.68□□□□□ -0.22
RNF220-209ENST00000474064 M0R378 163 aa13.68□□□□□ -0.22
RNF220-209ENST00000474064 ELOF1P60002 83 aaKnown RBP13.67□□□□□ -0.22
RNF220-209ENST00000474064 SERTAD4-AS1Q5TG53 156 aa13.66□□□□□ -0.22
RNF220-209ENST00000474064 DYNC2H1Q8NCM8 4307 aaKnown RBP13.65□□□□□ -0.22
RNF220-209ENST00000474064 C3orf84H3BNL1 204 aa13.63□□□□□ -0.23
RNF220-209ENST00000474064 NKAPP1Q8N9T2 125 aa13.63□□□□□ -0.23
RNF220-209ENST00000474064 FAM168BA1KXE4 195 aa13.63□□□□□ -0.23
RNF220-209ENST00000474064 PSCAO43653 123 aa13.63□□□□□ -0.23
RNF220-209ENST00000474064 SEC61GP60059 68 aa13.63□□□□□ -0.23
RNF220-209ENST00000474064 MEGF8Q7Z7M0 2845 aa13.62□□□□□ -0.23
RNF220-209ENST00000474064 LRCOL1A6NCL2 159 aa13.6□□□□□ -0.23
RNF220-209ENST00000474064 TLX1NBP0CAT3 122 aa13.6□□□□□ -0.23
RNF220-209ENST00000474064 C7orf33Q8WU49 177 aa13.58□□□□□ -0.24
RNF220-209ENST00000474064 STARD9Q9P2P6 4700 aa13.58□□□□□ -0.24
RNF220-209ENST00000474064 FAM30AQ9NZY2 134 aa13.57□□□□□ -0.24
RNF220-209ENST00000474064 NUPR2A6NF83 97 aa13.56□□□□□ -0.24
RNF220-209ENST00000474064 RPL37AP8A6NKH3 93 aa13.56□□□□□ -0.24
RNF220-209ENST00000474064 LINC00528Q8N1L1 170 aa13.55□□□□□ -0.24
RNF220-209ENST00000474064 SMIM29Q86T20 159 aa13.55□□□□□ -0.24
RNF220-209ENST00000474064 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.54□□□□□ -0.24
RNF220-209ENST00000474064 hDV103S1A0JD37 113 aa13.53□□□□□ -0.24
RNF220-209ENST00000474064 KRTAP7-1Q8IUC3 87 aa13.52□□□□□ -0.24
RNF220-209ENST00000474064 DEFB105AQ8NG35 78 aa13.49□□□□□ -0.25
RNF220-209ENST00000474064 IGKV2-24A0A0C4DH68 120 aa13.49□□□□□ -0.25
RNF220-209ENST00000474064 C1orf64Q8NEQ6 169 aa13.49□□□□□ -0.25
RNF220-209ENST00000474064 KCNQ1DNQ9H478 68 aa13.49□□□□□ -0.25
RNF220-209ENST00000474064 PLA2G2DQ9UNK4 145 aa13.48□□□□□ -0.25
RNF220-209ENST00000474064 NBDYA0A0U1RRE5 68 aa13.48□□□□□ -0.25
RNF220-209ENST00000474064 PRR15Q8IV56 129 aa13.46□□□□□ -0.25
RNF220-209ENST00000474064 A0A096LNI7 61 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms