RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 M0R2N4 97 aa4.07□□□□□ -1.76
HERC4-209ENST00000473533 SYCNQ0VAF6 134 aa4.07□□□□□ -1.76
HERC4-209ENST00000473533 TM2D3Q9BRN9 247 aa4.07□□□□□ -1.76
HERC4-209ENST00000473533 IGLV5-48A0A075B6I7 105 aa4.07□□□□□ -1.76
HERC4-209ENST00000473533 DEFB4AO15263 64 aa4.07□□□□□ -1.76
HERC4-209ENST00000473533 IGKV4-1P06312 121 aa4.07□□□□□ -1.76
HERC4-209ENST00000473533 Q6ZRU5 148 aa4.06□□□□□ -1.76
HERC4-209ENST00000473533 TLX1NBP0CAT3 122 aa4.06□□□□□ -1.76
HERC4-209ENST00000473533 SCXQ7RTU7 201 aa4.06□□□□□ -1.76
HERC4-209ENST00000473533 A0A0U1RQV1 116 aa4.06□□□□□ -1.76
HERC4-209ENST00000473533 LINC01556Q5JQF7 62 aa4.06□□□□□ -1.76
HERC4-209ENST00000473533 MGAM2Q2M2H8 2515 aa4.05□□□□□ -1.76
HERC4-209ENST00000473533 ETDCA0A1B0GVM5 59 aa4.05□□□□□ -1.76
HERC4-209ENST00000473533 KPRPQ5T749 579 aaPredicted RBP4.05□□□□□ -1.76
HERC4-209ENST00000473533 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
HERC4-209ENST00000473533 KRTAP10-3P60369 221 aa4.05□□□□□ -1.76
HERC4-209ENST00000473533 IGLV5-37A0A075B6J1 123 aa4.04□□□□□ -1.76
HERC4-209ENST00000473533 VWFP04275 2813 aa4.04□□□□□ -1.76
HERC4-209ENST00000473533 C15orf56Q8N910 161 aa4.04□□□□□ -1.76
HERC4-209ENST00000473533 FBN1P35555 2871 aaKnown RBP4.04□□□□□ -1.76
HERC4-209ENST00000473533 NDUFB1O75438 58 aa4.04□□□□□ -1.76
HERC4-209ENST00000473533 ESRGQ1W209 222 aa4.04□□□□□ -1.76
HERC4-209ENST00000473533 IGKV2D-24A0A075B6R9 120 aa4.03□□□□□ -1.76
HERC4-209ENST00000473533 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
HERC4-209ENST00000473533 AKAP9Q99996 3911 aa4.03□□□□□ -1.76
HERC4-209ENST00000473533 COL6A5A8TX70 2615 aa4.03□□□□□ -1.76
HERC4-209ENST00000473533 Q6ZRX8 168 aa4.03□□□□□ -1.76
HERC4-209ENST00000473533 WFDC10BQ8IUB3 73 aa4.03□□□□□ -1.76
HERC4-209ENST00000473533 Q8NBF4 154 aa4.03□□□□□ -1.76
HERC4-209ENST00000473533 C1orf137Q5JT78 98 aa4.02□□□□□ -1.77
HERC4-209ENST00000473533 Q6ZRP5 223 aa4.02□□□□□ -1.77
HERC4-209ENST00000473533 C7orf33Q8WU49 177 aa4.02□□□□□ -1.77
HERC4-209ENST00000473533 C3orf84H3BNL1 204 aa4.02□□□□□ -1.77
HERC4-209ENST00000473533 Q8N377 158 aa4.02□□□□□ -1.77
HERC4-209ENST00000473533 SPRR4Q96PI1 79 aa4.02□□□□□ -1.77
HERC4-209ENST00000473533 LCE6AA0A183 80 aa4.01□□□□□ -1.77
HERC4-209ENST00000473533 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
HERC4-209ENST00000473533 DEFB105AQ8NG35 78 aa4.01□□□□□ -1.77
HERC4-209ENST00000473533 V9GYY9 64 aa4.01□□□□□ -1.77
HERC4-209ENST00000473533 RPL37AP8A6NKH3 93 aa4.01□□□□□ -1.77
HERC4-209ENST00000473533 SPRR1AP35321 89 aa4.01□□□□□ -1.77
HERC4-209ENST00000473533 DNAH10OSP0CZ25 163 aa4□□□□□ -1.77
HERC4-209ENST00000473533 LINC00336Q6ZUF6 198 aa4□□□□□ -1.77
HERC4-209ENST00000473533 IGLV1-50A0A075B6I6 118 aa4□□□□□ -1.77
HERC4-209ENST00000473533 ZNF469Q96JG9 3925 aaPredicted RBP4□□□□□ -1.77
HERC4-209ENST00000473533 H3BPC8 53 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 MP68P56378 58 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 PKIGQ9Y2B9 76 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 TNP2Q05952 138 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 SMIM29Q86T20 159 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 PKD1L1Q8TDX9 2849 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 DEFB131BA0A096LNP1 70 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 Q8N9L7 120 aa3.99□□□□□ -1.77
HERC4-209ENST00000473533 Q6ZTC4 211 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 HIGD2AQ9BW72 106 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 HCG22E2RYF7 251 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 UBE2BP63146 152 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 OTOGQ6ZRI0 2925 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 A0A1W2PNM2 257 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 MRPL55Q7Z7F7 128 aaKnown RBP3.98□□□□□ -1.77
HERC4-209ENST00000473533 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 CYP4F30PQ9H0H9 118 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 FAM30AQ9NZY2 134 aa3.98□□□□□ -1.77
HERC4-209ENST00000473533 STAB1Q9NY15 2570 aa3.97□□□□□ -1.77
HERC4-209ENST00000473533 KRTAP4-16G5E9R7 235 aaPredicted RBP3.97□□□□□ -1.77
HERC4-209ENST00000473533 SERTAD4-AS1Q5TG53 156 aa3.97□□□□□ -1.77
HERC4-209ENST00000473533 REG3GQ6UW15 175 aa3.97□□□□□ -1.77
HERC4-209ENST00000473533 NSD1Q96L73 2696 aaPredicted RBP3.97□□□□□ -1.77
HERC4-209ENST00000473533 hDV103S1A0JD37 113 aa3.97□□□□□ -1.77
HERC4-209ENST00000473533 Q1T7F1 81 aa3.96□□□□□ -1.78
HERC4-209ENST00000473533 LINC00474Q9P2X8 69 aa3.96□□□□□ -1.78
HERC4-209ENST00000473533 TENM1Q9UKZ4 2725 aa3.96□□□□□ -1.78
HERC4-209ENST00000473533 MPLKIPQ8TAP9 179 aa3.96□□□□□ -1.78
HERC4-209ENST00000473533 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.78
HERC4-209ENST00000473533 IGLV8-61A0A075B6I0 122 aa3.95□□□□□ -1.78
HERC4-209ENST00000473533 Q9BRP9 147 aa3.95□□□□□ -1.78
HERC4-209ENST00000473533 INAFM1C9JVW0 142 aa3.94□□□□□ -1.78
HERC4-209ENST00000473533 DSCR10P59022 87 aa3.94□□□□□ -1.78
HERC4-209ENST00000473533 C1orf195Q5TG92 126 aa3.94□□□□□ -1.78
HERC4-209ENST00000473533 PSCAO43653 123 aa3.94□□□□□ -1.78
HERC4-209ENST00000473533 C14orf177Q52M58 125 aa3.94□□□□□ -1.78
HERC4-209ENST00000473533 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
HERC4-209ENST00000473533 LINC00476Q8WZB0 136 aa3.94□□□□□ -1.78
HERC4-209ENST00000473533 CSMD3Q7Z407 3707 aa3.93□□□□□ -1.78
HERC4-209ENST00000473533 SMR3AQ99954 134 aa3.93□□□□□ -1.78
HERC4-209ENST00000473533 K7EQZ3 153 aa3.93□□□□□ -1.78
HERC4-209ENST00000473533 PRR15Q8IV56 129 aa3.93□□□□□ -1.78
HERC4-209ENST00000473533 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.92□□□□□ -1.78
HERC4-209ENST00000473533 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
HERC4-209ENST00000473533 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
HERC4-209ENST00000473533 ST20-AS1Q8NBB2 130 aa3.92□□□□□ -1.78
HERC4-209ENST00000473533 RETNQ9HD89 108 aa3.92□□□□□ -1.78
HERC4-209ENST00000473533 PRB2P02812 416 aaPredicted RBP3.92□□□□□ -1.78
HERC4-209ENST00000473533 H0Y9J4 135 aa3.91□□□□□ -1.78
HERC4-209ENST00000473533 UBE2AP49459 152 aa3.91□□□□□ -1.78
HERC4-209ENST00000473533 FAM229BQ4G0N7 80 aa3.91□□□□□ -1.78
HERC4-209ENST00000473533 TRRAPQ9Y4A5 3859 aa3.91□□□□□ -1.78
HERC4-209ENST00000473533 TRAV22A0A0B4J277 110 aa3.91□□□□□ -1.78
HERC4-209ENST00000473533 C16orf90A8MZG2 172 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms