RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 Q6ZRP5 223 aa13.88□□□□□ -0.19
COL18A1-207ENST00000473212 WIPF1O43516 503 aa13.87□□□□□ -0.19
COL18A1-207ENST00000473212 RMI2Q96E14 147 aa13.87□□□□□ -0.19
COL18A1-207ENST00000473212 KLKP1Q107X0 134 aa13.86□□□□□ -0.19
COL18A1-207ENST00000473212 TM2D3Q9BRN9 247 aa13.86□□□□□ -0.19
COL18A1-207ENST00000473212 C4orf26Q17RF5 130 aa13.86□□□□□ -0.19
COL18A1-207ENST00000473212 IGKV2D-24A0A075B6R9 120 aa13.85□□□□□ -0.19
COL18A1-207ENST00000473212 Q5XG85 94 aa13.85□□□□□ -0.19
COL18A1-207ENST00000473212 H3BNG1 76 aa13.84□□□□□ -0.19
COL18A1-207ENST00000473212 C1orf43Q9BWL3 253 aa13.84□□□□□ -0.19
COL18A1-207ENST00000473212 Q8N9L7 120 aa13.83□□□□□ -0.2
COL18A1-207ENST00000473212 DEFB105AQ8NG35 78 aa13.8□□□□□ -0.2
COL18A1-207ENST00000473212 F8WEM9 126 aa13.79□□□□□ -0.2
COL18A1-207ENST00000473212 BAHCC1Q9P281 2608 aa13.79□□□□□ -0.2
COL18A1-207ENST00000473212 SYCNQ0VAF6 134 aa13.79□□□□□ -0.2
COL18A1-207ENST00000473212 SERTAD4-AS1Q5TG53 156 aa13.78□□□□□ -0.2
COL18A1-207ENST00000473212 BPY2O14599 106 aa13.77□□□□□ -0.21
COL18A1-207ENST00000473212 HRCT1Q6UXD1 115 aa13.77□□□□□ -0.21
COL18A1-207ENST00000473212 NKAPP1Q8N9T2 125 aa13.77□□□□□ -0.21
COL18A1-207ENST00000473212 DEFB131BA0A096LNP1 70 aa13.77□□□□□ -0.21
COL18A1-207ENST00000473212 C3orf84H3BNL1 204 aa13.77□□□□□ -0.21
COL18A1-207ENST00000473212 NREPQ16612 68 aa13.77□□□□□ -0.21
COL18A1-207ENST00000473212 SERP1Q9Y6X1 66 aa13.77□□□□□ -0.21
COL18A1-207ENST00000473212 C7orf33Q8WU49 177 aa13.75□□□□□ -0.21
COL18A1-207ENST00000473212 KCNQ1DNQ9H478 68 aa13.75□□□□□ -0.21
COL18A1-207ENST00000473212 IGKV4-1P06312 121 aa13.74□□□□□ -0.21
COL18A1-207ENST00000473212 CASC10Q5T4H9 136 aa13.74□□□□□ -0.21
COL18A1-207ENST00000473212 LINC01556Q5JQF7 62 aa13.74□□□□□ -0.21
COL18A1-207ENST00000473212 NBEAL1Q6ZS30 2694 aa13.74□□□□□ -0.21
COL18A1-207ENST00000473212 Q8N377 158 aa13.73□□□□□ -0.21
COL18A1-207ENST00000473212 EPM2AB3EWF7 344 aa13.73□□□□□ -0.21
COL18A1-207ENST00000473212 FAM168BA1KXE4 195 aa13.72□□□□□ -0.21
COL18A1-207ENST00000473212 PRB2P02812 416 aaPredicted RBP13.71□□□□□ -0.21
COL18A1-207ENST00000473212 RPL37AP8A6NKH3 93 aa13.7□□□□□ -0.22
COL18A1-207ENST00000473212 C11orf45Q8TAV5 145 aa13.7□□□□□ -0.22
COL18A1-207ENST00000473212 COL6A5A8TX70 2615 aa13.7□□□□□ -0.22
COL18A1-207ENST00000473212 F8WDY8 70 aa13.69□□□□□ -0.22
COL18A1-207ENST00000473212 TMEM254Q8TBM7 123 aa13.68□□□□□ -0.22
COL18A1-207ENST00000473212 LYSTQ99698 3801 aa13.68□□□□□ -0.22
COL18A1-207ENST00000473212 KRTAP24-1Q3LI83 254 aa13.67□□□□□ -0.22
COL18A1-207ENST00000473212 NDUFC1O43677 76 aa13.67□□□□□ -0.22
COL18A1-207ENST00000473212 DNAH3Q8TD57 4116 aa13.67□□□□□ -0.22
COL18A1-207ENST00000473212 IGLV5-48A0A075B6I7 105 aa13.66□□□□□ -0.22
COL18A1-207ENST00000473212 DNAH1Q9P2D7 4330 aa13.64□□□□□ -0.23
COL18A1-207ENST00000473212 Q9BRP9 147 aa13.64□□□□□ -0.23
COL18A1-207ENST00000473212 Q6ZRX8 168 aa13.63□□□□□ -0.23
COL18A1-207ENST00000473212 OCR1Q9BZK8 76 aa13.63□□□□□ -0.23
COL18A1-207ENST00000473212 KRTAP7-1Q8IUC3 87 aa13.62□□□□□ -0.23
COL18A1-207ENST00000473212 DNAH10Q8IVF4 4471 aa13.62□□□□□ -0.23
COL18A1-207ENST00000473212 ERC2-IT1O76042 136 aa13.62□□□□□ -0.23
COL18A1-207ENST00000473212 DHRS4-AS1Q9P1J3 65 aa13.62□□□□□ -0.23
COL18A1-207ENST00000473212 ST20-AS1Q8NBB2 130 aa13.61□□□□□ -0.23
COL18A1-207ENST00000473212 LINC00588Q9Y4M8 146 aa13.61□□□□□ -0.23
COL18A1-207ENST00000473212 A0A1W2PNM2 257 aa13.6□□□□□ -0.23
COL18A1-207ENST00000473212 DNAH10OSP0CZ25 163 aa13.6□□□□□ -0.23
COL18A1-207ENST00000473212 FUSP35637 526 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■■■■□ 19.4
COL18A1-207ENST00000473212 KRTAP4-16G5E9R7 235 aaPredicted RBP13.6□□□□□ -0.23
COL18A1-207ENST00000473212 TLX1NBP0CAT3 122 aa13.6□□□□□ -0.23
COL18A1-207ENST00000473212 IGLV1-50A0A075B6I6 118 aa13.59□□□□□ -0.23
COL18A1-207ENST00000473212 CSMD3Q7Z407 3707 aa13.59□□□□□ -0.23
COL18A1-207ENST00000473212 ETDCA0A1B0GVM5 59 aa13.59□□□□□ -0.23
COL18A1-207ENST00000473212 PLA2G2DQ9UNK4 145 aa13.58□□□□□ -0.23
COL18A1-207ENST00000473212 C1orf137Q5JT78 98 aa13.57□□□□□ -0.24
COL18A1-207ENST00000473212 PRYO14603 147 aa13.57□□□□□ -0.24
COL18A1-207ENST00000473212 FP248Q71RG6 208 aaPredicted RBP13.57□□□□□ -0.24
COL18A1-207ENST00000473212 HUWE1Q7Z6Z7 4374 aaKnown RBP13.57□□□□□ -0.24
COL18A1-207ENST00000473212 A0A0U1RQV1 116 aa13.56□□□□□ -0.24
COL18A1-207ENST00000473212 MRAPQ8TCY5 172 aa13.56□□□□□ -0.24
COL18A1-207ENST00000473212 SMIM26A0A096LP01 95 aa13.55□□□□□ -0.24
COL18A1-207ENST00000473212 ATP5EP56381 51 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-207ENST00000473212 TNP2Q05952 138 aa13.55□□□□□ -0.24
COL18A1-207ENST00000473212 SPRR1AP35321 89 aa13.55□□□□□ -0.24
COL18A1-207ENST00000473212 IGLV5-37A0A075B6J1 123 aa13.53□□□□□ -0.24
COL18A1-207ENST00000473212 SMIM29Q86T20 159 aa13.53□□□□□ -0.24
COL18A1-207ENST00000473212 HIGD2AQ9BW72 106 aa13.53□□□□□ -0.24
COL18A1-207ENST00000473212 LINC00474Q9P2X8 69 aa13.53□□□□□ -0.24
COL18A1-207ENST00000473212 Q8NBF4 154 aa13.52□□□□□ -0.25
COL18A1-207ENST00000473212 FAM30AQ9NZY2 134 aa13.52□□□□□ -0.25
COL18A1-207ENST00000473212 A0A1B0GW54 56 aa13.5□□□□□ -0.25
COL18A1-207ENST00000473212 MGAM2Q2M2H8 2515 aa13.5□□□□□ -0.25
COL18A1-207ENST00000473212 A0A0G2JQZ4 141 aa13.49□□□□□ -0.25
COL18A1-207ENST00000473212 A0A1W2PNN7 141 aa13.49□□□□□ -0.25
COL18A1-207ENST00000473212 MRPL55Q7Z7F7 128 aaKnown RBP13.49□□□□□ -0.25
COL18A1-207ENST00000473212 STAB2Q8WWQ8 2551 aa13.49□□□□□ -0.25
COL18A1-207ENST00000473212 UBE2BP63146 152 aa13.49□□□□□ -0.25
COL18A1-207ENST00000473212 SRRM2Q9UQ35 2752 aaKnown RBP13.48□□□□□ -0.25
COL18A1-207ENST00000473212 COL7A1Q02388 2944 aa13.46□□□□□ -0.25
COL18A1-207ENST00000473212 SPRR4Q96PI1 79 aa13.46□□□□□ -0.25
COL18A1-207ENST00000473212 LINC00336Q6ZUF6 198 aa13.46□□□□□ -0.26
COL18A1-207ENST00000473212 DNAH9Q9NYC9 4486 aa13.46□□□□□ -0.26
COL18A1-207ENST00000473212 TENM2Q9NT68 2774 aa13.45□□□□□ -0.26
COL18A1-207ENST00000473212 DSCR10P59022 87 aa13.44□□□□□ -0.26
COL18A1-207ENST00000473212 FAM229BQ4G0N7 80 aa13.44□□□□□ -0.26
COL18A1-207ENST00000473212 K7EQZ3 153 aa13.42□□□□□ -0.26
COL18A1-207ENST00000473212 REG3GQ6UW15 175 aa13.41□□□□□ -0.26
COL18A1-207ENST00000473212 KRTAP1-5Q9BYS1 174 aa13.39□□□□□ -0.27
COL18A1-207ENST00000473212 LINC00476Q8WZB0 136 aa13.39□□□□□ -0.27
COL18A1-207ENST00000473212 IGKV2-24A0A0C4DH68 120 aa13.38□□□□□ -0.27
COL18A1-207ENST00000473212 LCE6AA0A183 80 aa13.36□□□□□ -0.27
COL18A1-207ENST00000473212 K7EIL1 84 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 247.3 ms