RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 A0A0U1RQV1 116 aa6.88□□□□□ -1.31
APTX-216ENST00000472896 C1orf158Q8N1D5 194 aa6.88□□□□□ -1.31
APTX-216ENST00000472896 C11orf68Q9H3H3 251 aaKnown RBP6.88□□□□□ -1.31
APTX-216ENST00000472896 LINC00959A0A1B0GUT2 108 aa6.87□□□□□ -1.31
APTX-216ENST00000472896 SLURP1P55000 103 aa6.87□□□□□ -1.31
APTX-216ENST00000472896 PRR15Q8IV56 129 aa6.87□□□□□ -1.31
APTX-216ENST00000472896 PRYO14603 147 aa6.87□□□□□ -1.31
APTX-216ENST00000472896 C6orf99Q4VX62 202 aa6.87□□□□□ -1.31
APTX-216ENST00000472896 STHQ8IWL8 128 aa6.87□□□□□ -1.31
APTX-216ENST00000472896 RETNQ9HD89 108 aa6.87□□□□□ -1.31
APTX-216ENST00000472896 ALMS1Q8TCU4 4167 aa6.86□□□□□ -1.31
APTX-216ENST00000472896 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
APTX-216ENST00000472896 TRBV6-8A0A0A6YYG3 113 aa6.86□□□□□ -1.31
APTX-216ENST00000472896 BPY2O14599 106 aa6.86□□□□□ -1.31
APTX-216ENST00000472896 FUSP35637 526 aaKnown RBP eCLIP6.86□□□□□ -1.31
APTX-216ENST00000472896 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
APTX-216ENST00000472896 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
APTX-216ENST00000472896 IGHV4-28A0A0C4DH34 117 aa6.84□□□□□ -1.31
APTX-216ENST00000472896 LINC00476Q8WZB0 136 aa6.84□□□□□ -1.31
APTX-216ENST00000472896 FRAS1Q86XX4 4008 aa6.83□□□□□ -1.32
APTX-216ENST00000472896 M0R2N4 97 aa6.83□□□□□ -1.32
APTX-216ENST00000472896 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
APTX-216ENST00000472896 Q6ZRU5 148 aa6.83□□□□□ -1.32
APTX-216ENST00000472896 Q6ZTC4 211 aa6.83□□□□□ -1.32
APTX-216ENST00000472896 MPLKIPQ8TAP9 179 aa6.83□□□□□ -1.32
APTX-216ENST00000472896 LY6G6CO95867 125 aa6.82□□□□□ -1.32
APTX-216ENST00000472896 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
APTX-216ENST00000472896 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
APTX-216ENST00000472896 C16orf74Q96GX8 76 aa6.82□□□□□ -1.32
APTX-216ENST00000472896 A0A1B0GUV1 79 aa6.82□□□□□ -1.32
APTX-216ENST00000472896 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
APTX-216ENST00000472896 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
APTX-216ENST00000472896 PRR3P79522 188 aaKnown RBP6.81□□□□□ -1.32
APTX-216ENST00000472896 Q1T7F1 81 aa6.81□□□□□ -1.32
APTX-216ENST00000472896 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
APTX-216ENST00000472896 TRGV2A0A075B6R0 118 aa6.8□□□□□ -1.32
APTX-216ENST00000472896 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
APTX-216ENST00000472896 TNP2Q05952 138 aa6.8□□□□□ -1.32
APTX-216ENST00000472896 NOP10Q9NPE3 64 aaKnown RBP6.8□□□□□ -1.32
APTX-216ENST00000472896 COX7BP24311 80 aa6.8□□□□□ -1.32
APTX-216ENST00000472896 CMC4P56277 68 aaPredicted RBP6.8□□□□□ -1.32
APTX-216ENST00000472896 KIAA0087Q14695 138 aa6.8□□□□□ -1.32
APTX-216ENST00000472896 LOC100131303A0A0U1RQF7 123 aa6.79□□□□□ -1.32
APTX-216ENST00000472896 IGLV6-57P01721 117 aa6.79□□□□□ -1.32
APTX-216ENST00000472896 Q6ZQY7 126 aa6.79□□□□□ -1.32
APTX-216ENST00000472896 hDV103S1A0JD37 113 aa6.78□□□□□ -1.32
APTX-216ENST00000472896 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
APTX-216ENST00000472896 RYR1P21817 5038 aa6.77□□□□□ -1.32
APTX-216ENST00000472896 IGKV4-1P06312 121 aa6.77□□□□□ -1.33
APTX-216ENST00000472896 ODF3L2Q3SX64 289 aa6.77□□□□□ -1.33
APTX-216ENST00000472896 CD164L2Q6UWJ8 174 aa6.77□□□□□ -1.33
APTX-216ENST00000472896 SCXQ7RTU7 201 aa6.77□□□□□ -1.33
APTX-216ENST00000472896 DIRC1Q969H9 104 aa6.77□□□□□ -1.33
APTX-216ENST00000472896 KIAA1109Q2LD37 5005 aa6.76□□□□□ -1.33
APTX-216ENST00000472896 KMT2AQ03164 3969 aa6.74□□□□□ -1.33
APTX-216ENST00000472896 A0A1B0GW54 56 aa6.74□□□□□ -1.33
APTX-216ENST00000472896 CD164Q04900 197 aa6.74□□□□□ -1.33
APTX-216ENST00000472896 WFDC10AQ9H1F0 79 aa6.74□□□□□ -1.33
APTX-216ENST00000472896 DNAH10Q8IVF4 4471 aa6.73□□□□□ -1.33
APTX-216ENST00000472896 DAD1P61803 113 aa6.73□□□□□ -1.33
APTX-216ENST00000472896 Q8NDZ9 215 aa6.73□□□□□ -1.33
APTX-216ENST00000472896 HIGD2AQ9BW72 106 aa6.73□□□□□ -1.33
APTX-216ENST00000472896 A0A0J9YWU9 116 aa6.72□□□□□ -1.33
APTX-216ENST00000472896 ELOF1P60002 83 aaKnown RBP6.72□□□□□ -1.33
APTX-216ENST00000472896 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
APTX-216ENST00000472896 CELA1Q9UNI1 258 aa6.72□□□□□ -1.33
APTX-216ENST00000472896 LYRM9A8MSI8 78 aa6.71□□□□□ -1.34
APTX-216ENST00000472896 Q6ZRP5 223 aa6.71□□□□□ -1.34
APTX-216ENST00000472896 GVQW2A0A096LPI5 108 aaPredicted RBP6.7□□□□□ -1.34
APTX-216ENST00000472896 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
APTX-216ENST00000472896 CHCHD10Q8WYQ3 142 aaPredicted RBP6.7□□□□□ -1.34
APTX-216ENST00000472896 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
APTX-216ENST00000472896 HECTD4Q9Y4D8 3996 aa6.7□□□□□ -1.34
APTX-216ENST00000472896 NUPR2A6NF83 97 aa6.69□□□□□ -1.34
APTX-216ENST00000472896 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
APTX-216ENST00000472896 GIG44P09565 113 aaPredicted RBP6.69□□□□□ -1.34
APTX-216ENST00000472896 HIGD2BQ4VC39 106 aa6.69□□□□□ -1.34
APTX-216ENST00000472896 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
APTX-216ENST00000472896 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
APTX-216ENST00000472896 ZCCHC13Q8WW36 166 aaKnown RBP6.69□□□□□ -1.34
APTX-216ENST00000472896 VPREB1P12018 145 aa6.68□□□□□ -1.34
APTX-216ENST00000472896 GYPEP15421 78 aa6.68□□□□□ -1.34
APTX-216ENST00000472896 SPAG11BQ08648 103 aa6.67□□□□□ -1.34
APTX-216ENST00000472896 LINC00612Q8N6U2 182 aa6.67□□□□□ -1.34
APTX-216ENST00000472896 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
APTX-216ENST00000472896 TRAV22A0A0B4J277 110 aa6.66□□□□□ -1.34
APTX-216ENST00000472896 CLPSL2Q6UWE3 100 aa6.66□□□□□ -1.34
APTX-216ENST00000472896 Q8N9L7 120 aa6.66□□□□□ -1.34
APTX-216ENST00000472896 NDUFB1O75438 58 aa6.65□□□□□ -1.34
APTX-216ENST00000472896 UBE2BP63146 152 aa6.65□□□□□ -1.34
APTX-216ENST00000472896 REG3AQ06141 175 aa6.65□□□□□ -1.34
APTX-216ENST00000472896 UNQ6190/PRO20217Q6UXQ8 127 aa6.65□□□□□ -1.34
APTX-216ENST00000472896 ETDCA0A1B0GVM5 59 aa6.64□□□□□ -1.35
APTX-216ENST00000472896 SMIM29Q86T20 159 aa6.64□□□□□ -1.35
APTX-216ENST00000472896 FAM30AQ9NZY2 134 aa6.64□□□□□ -1.35
APTX-216ENST00000472896 PRO0255Q9UI72 69 aa6.64□□□□□ -1.35
APTX-216ENST00000472896 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
APTX-216ENST00000472896 M0R378 163 aa6.63□□□□□ -1.35
APTX-216ENST00000472896 PSCAO43653 123 aa6.63□□□□□ -1.35
APTX-216ENST00000472896 ANGP03950 147 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms