RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 PHF5AQ7RTV0 110 aaKnown RBP1.57□□□□□ -2.16
HDAC9-221ENST00000471887 SMIM15Q7Z3B0 74 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 LINC00526Q96FQ7 95 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 RNASE7Q9H1E1 156 aaKnown RBP1.57□□□□□ -2.16
HDAC9-221ENST00000471887 SMDT1Q9H4I9 107 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 ST20Q9HBF5 79 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 MED9Q9NWA0 146 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 TRBV30A0A0K0K1B3 111 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 A0A1B0GUT8 65 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 HIGD1CA8MV81 97 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 NDUFA1O15239 70 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 NUPR1O60356 82 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 Q6ZUT4 128 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 FAM19A1Q7Z5A9 133 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 SLC51BQ86UW2 128 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 BORCS7Q96B45 105 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 IMMP2LQ96T52 175 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 C20orf78Q9BR46 151 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 OSTCQ9NRP0 149 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 SPANXA1Q9NS26 97 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 C6orf48Q9UBA6 75 aa1.56□□□□□ -2.16
HDAC9-221ENST00000471887 TRAV13-1A0A0B4J241 112 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 A0A1B0GW15 77 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 LINC00862A6NCI5 91 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 FCER1GP30273 86 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 UBE2D1P51668 147 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 TPRXLQ17RH7 258 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 TCTE3Q8IZS6 198 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 TP73-AS1Q9UF72 201 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 V9GYV3 84 aa1.55□□□□□ -2.16
HDAC9-221ENST00000471887 TGIF2-C20orf24A0A0A6YYL0 155 aa1.54□□□□□ -2.16
HDAC9-221ENST00000471887 HBBP68871 147 aa1.54□□□□□ -2.16
HDAC9-221ENST00000471887 MRPL51Q4U2R6 128 aaKnown RBP1.54□□□□□ -2.16
HDAC9-221ENST00000471887 UNQ6190/PRO20217Q6UXQ8 127 aa1.54□□□□□ -2.16
HDAC9-221ENST00000471887 FAM19A5Q7Z5A7 132 aaPredicted RBP1.54□□□□□ -2.16
HDAC9-221ENST00000471887 FAM19A3Q7Z5A8 133 aa1.54□□□□□ -2.16
HDAC9-221ENST00000471887 PACRGQ96M98 296 aaPredicted RBP1.54□□□□□ -2.16
HDAC9-221ENST00000471887 NAT8BQ9UHF3 227 aa1.54□□□□□ -2.16
HDAC9-221ENST00000471887 SMIM27A0A1W2PRY6 76 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 ZNF727A8MUV8 499 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 BCE1O60756 84 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 NPYP01303 97 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 PPBPP02775 128 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 S100A8P05109 93 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 SRP19P09132 144 aaKnown RBP1.53□□□□□ -2.16
HDAC9-221ENST00000471887 CRYGAP11844 174 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 IFI27P40305 119 aaPredicted RBP1.53□□□□□ -2.16
HDAC9-221ENST00000471887 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
HDAC9-221ENST00000471887 RPL39P62891 51 aaKnown RBP1.53□□□□□ -2.16
HDAC9-221ENST00000471887 UBE2BP63146 152 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 FAM229BQ4G0N7 80 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 ATP5L2Q7Z4Y8 100 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 Q8IZM0 81 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 AMELXQ99217 191 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 SMIM7Q9BQ49 75 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 LAMTOR2Q9Y2Q5 125 aa1.53□□□□□ -2.16
HDAC9-221ENST00000471887 D6R8Y8 96 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 F8VRH5 84 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 F8W036 122 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 K7EMI3 77 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 CKS2P33552 79 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 CEBPGP53567 150 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 SEC11AP67812 179 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 C2orf82Q6UX34 121 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 ALKAL2Q6UX46 152 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 FP248Q71RG6 208 aaPredicted RBP1.52□□□□□ -2.17
HDAC9-221ENST00000471887 TMEM141Q96I45 108 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 C2orf88Q9BSF0 95 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 EIF5A2Q9GZV4 153 aaKnown RBP1.52□□□□□ -2.17
HDAC9-221ENST00000471887 NAT8Q9UHE5 227 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 C22orf24Q9Y442 160 aa1.52□□□□□ -2.17
HDAC9-221ENST00000471887 IGIPA6NJ69 53 aa1.51□□□□□ -2.17
HDAC9-221ENST00000471887 HERVK_113P63121 156 aa1.51□□□□□ -2.17
HDAC9-221ENST00000471887 ASB16-AS1Q495Z4 193 aa1.51□□□□□ -2.17
HDAC9-221ENST00000471887 Q8N8P6 123 aa1.51□□□□□ -2.17
HDAC9-221ENST00000471887 XAGE1AQ9HD64 81 aa1.51□□□□□ -2.17
HDAC9-221ENST00000471887 CYSLTR1Q9Y271 337 aa1.51□□□□□ -2.17
HDAC9-221ENST00000471887 LINC01549A6NIU2 74 aa1.5□□□□□ -2.17
HDAC9-221ENST00000471887 CKS1BP61024 79 aa1.5□□□□□ -2.17
HDAC9-221ENST00000471887 RPS29P62273 56 aaKnown RBP1.5□□□□□ -2.17
HDAC9-221ENST00000471887 ADIRFQ15847 76 aa1.5□□□□□ -2.17
HDAC9-221ENST00000471887 MRPL54Q6P161 138 aaKnown RBP1.5□□□□□ -2.17
HDAC9-221ENST00000471887 SPAG11AQ6PDA7 123 aa1.5□□□□□ -2.17
HDAC9-221ENST00000471887 PRELID3AQ96N28 172 aa1.5□□□□□ -2.17
HDAC9-221ENST00000471887 MAP1LC3AQ9H492 121 aa1.5□□□□□ -2.17
HDAC9-221ENST00000471887 CDKN2A-AS1Q9UH64 79 aa1.5□□□□□ -2.17
HDAC9-221ENST00000471887 TINCRA0A1B0GVN0 87 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 LINC01546A6NGU7 62 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 M0R378 163 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 G0S2P27469 103 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 PEA15Q15121 130 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 AKAP14Q86UN6 197 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 TOMM6Q96B49 74 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 RETNLBQ9BQ08 111 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 GNB1LQ9BYB4 327 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 TMEM126AQ9H061 195 aa1.49□□□□□ -2.17
HDAC9-221ENST00000471887 NXT2Q9NPJ8 142 aaKnown RBP1.49□□□□□ -2.17
HDAC9-221ENST00000471887 TOMM7Q9P0U1 55 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms