RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 Q6ZQT0 140 aa5.56□□□□□ -1.52
CD47-204ENST00000471694 SPRR4Q96PI1 79 aa5.56□□□□□ -1.52
CD47-204ENST00000471694 LINC01600Q96MT4 127 aa5.56□□□□□ -1.52
CD47-204ENST00000471694 CNBPP62633 177 aaKnown RBP5.56□□□□□ -1.52
CD47-204ENST00000471694 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
CD47-204ENST00000471694 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
CD47-204ENST00000471694 C1orf195Q5TG92 126 aa5.55□□□□□ -1.52
CD47-204ENST00000471694 A0A096LNJ9 63 aa5.54□□□□□ -1.52
CD47-204ENST00000471694 PLA2G2DQ9UNK4 145 aa5.54□□□□□ -1.52
CD47-204ENST00000471694 IGLV5-48A0A075B6I7 105 aa5.54□□□□□ -1.52
CD47-204ENST00000471694 FAM218AQ96MZ4 157 aa5.54□□□□□ -1.52
CD47-204ENST00000471694 YPEL4Q96NS1 127 aa5.54□□□□□ -1.52
CD47-204ENST00000471694 PRR34Q9NV39 138 aa5.53□□□□□ -1.52
CD47-204ENST00000471694 TLX1NBP0CAT3 122 aa5.53□□□□□ -1.52
CD47-204ENST00000471694 LOC110117498A0A087WWA1 95 aa5.53□□□□□ -1.52
CD47-204ENST00000471694 A0A0G2JQZ4 141 aa5.53□□□□□ -1.52
CD47-204ENST00000471694 Q8N1X5 172 aa5.53□□□□□ -1.52
CD47-204ENST00000471694 FASNP49327 2511 aaKnown RBP5.52□□□□□ -1.53
CD47-204ENST00000471694 GIG44P09565 113 aaPredicted RBP5.51□□□□□ -1.53
CD47-204ENST00000471694 LINC01546A6NGU7 62 aa5.51□□□□□ -1.53
CD47-204ENST00000471694 HRES1P13985 223 aa5.49□□□□□ -1.53
CD47-204ENST00000471694 ANKRD11Q6UB99 2663 aaPredicted RBP5.49□□□□□ -1.53
CD47-204ENST00000471694 OXTP01178 125 aa5.49□□□□□ -1.53
CD47-204ENST00000471694 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
CD47-204ENST00000471694 SPTBN4Q9H254 2564 aa5.48□□□□□ -1.53
CD47-204ENST00000471694 USP9XQ93008 2570 aaPredicted RBP5.48□□□□□ -1.53
CD47-204ENST00000471694 WIPF1O43516 503 aa5.48□□□□□ -1.53
CD47-204ENST00000471694 PRR15Q8IV56 129 aa5.47□□□□□ -1.53
CD47-204ENST00000471694 TLN2Q9Y4G6 2542 aa5.47□□□□□ -1.53
CD47-204ENST00000471694 EP400Q96L91 3159 aa5.47□□□□□ -1.53
CD47-204ENST00000471694 LINC00310P59036 64 aa5.46□□□□□ -1.53
CD47-204ENST00000471694 COA5Q86WW8 74 aa5.45□□□□□ -1.54
CD47-204ENST00000471694 Q8N377 158 aa5.45□□□□□ -1.54
CD47-204ENST00000471694 KLK9Q2XQG4 91 aa5.44□□□□□ -1.54
CD47-204ENST00000471694 S4R3F8 94 aa5.44□□□□□ -1.54
CD47-204ENST00000471694 UQCR11O14957 56 aa5.43□□□□□ -1.54
CD47-204ENST00000471694 LINC00483Q53H64 154 aa5.43□□□□□ -1.54
CD47-204ENST00000471694 POLQO75417 2590 aa5.43□□□□□ -1.54
CD47-204ENST00000471694 ERC2-IT1O76042 136 aa5.42□□□□□ -1.54
CD47-204ENST00000471694 MTORP42345 2549 aa5.42□□□□□ -1.54
CD47-204ENST00000471694 FAM229BQ4G0N7 80 aa5.42□□□□□ -1.54
CD47-204ENST00000471694 CD164Q04900 197 aa5.41□□□□□ -1.54
CD47-204ENST00000471694 CSAG1Q6PB30 78 aa5.41□□□□□ -1.54
CD47-204ENST00000471694 MIR22HGQ0VDD5 57 aa5.41□□□□□ -1.54
CD47-204ENST00000471694 FAM104AQ969W3 186 aa5.4□□□□□ -1.55
CD47-204ENST00000471694 ACANP16112 2415 aa5.39□□□□□ -1.55
CD47-204ENST00000471694 PLAC8Q9NZF1 115 aa5.39□□□□□ -1.55
CD47-204ENST00000471694 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
CD47-204ENST00000471694 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
CD47-204ENST00000471694 KRTAP10-1P60331 282 aa5.37□□□□□ -1.55
CD47-204ENST00000471694 PKD1L2Q7Z442 2459 aa5.36□□□□□ -1.55
CD47-204ENST00000471694 KRTAP10-2P60368 255 aa5.35□□□□□ -1.55
CD47-204ENST00000471694 C4orf26Q17RF5 130 aa5.35□□□□□ -1.55
CD47-204ENST00000471694 LITAFQ99732 161 aa5.32□□□□□ -1.56
CD47-204ENST00000471694 R4GN34 69 aa5.32□□□□□ -1.56
CD47-204ENST00000471694 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
CD47-204ENST00000471694 CR1P17927 2039 aa5.32□□□□□ -1.56
CD47-204ENST00000471694 CEP295Q9C0D2 2601 aa5.31□□□□□ -1.56
CD47-204ENST00000471694 A8MUN3 132 aa5.31□□□□□ -1.56
CD47-204ENST00000471694 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
CD47-204ENST00000471694 WDR87Q6ZQQ6 2873 aa5.3□□□□□ -1.56
CD47-204ENST00000471694 SETD2Q9BYW2 2564 aaPredicted RBP5.3□□□□□ -1.56
CD47-204ENST00000471694 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
CD47-204ENST00000471694 LCA10Q71F78 164 aa5.29□□□□□ -1.56
CD47-204ENST00000471694 HECTD1Q9ULT8 2610 aa5.28□□□□□ -1.56
CD47-204ENST00000471694 SRCAPQ6ZRS2 3230 aa5.27□□□□□ -1.57
CD47-204ENST00000471694 USP9YO00507 2555 aaPredicted RBP5.26□□□□□ -1.57
CD47-204ENST00000471694 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
CD47-204ENST00000471694 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
CD47-204ENST00000471694 SMCPP49901 116 aaPredicted RBP5.25□□□□□ -1.57
CD47-204ENST00000471694 SPINK7P58062 85 aa5.24□□□□□ -1.57
CD47-204ENST00000471694 CYP4F30PQ9H0H9 118 aa5.23□□□□□ -1.57
CD47-204ENST00000471694 KRTAP21-3Q3LHN1 58 aa5.23□□□□□ -1.57
CD47-204ENST00000471694 A0A1B0GU33 70 aa5.22□□□□□ -1.57
CD47-204ENST00000471694 EIF4EBP3O60516 100 aaPredicted RBP5.22□□□□□ -1.57
CD47-204ENST00000471694 M0QZ58 72 aa5.21□□□□□ -1.58
CD47-204ENST00000471694 FLNBO75369 2602 aaKnown RBP5.21□□□□□ -1.58
CD47-204ENST00000471694 EPG5Q9HCE0 2579 aa5.21□□□□□ -1.58
CD47-204ENST00000471694 KRTAP1-5Q9BYS1 174 aa5.21□□□□□ -1.58
CD47-204ENST00000471694 MGAM2Q2M2H8 2515 aa5.17□□□□□ -1.58
CD47-204ENST00000471694 DMAC1Q96GE9 116 aa5.15□□□□□ -1.58
CD47-204ENST00000471694 CENPFP49454 3210 aa5.15□□□□□ -1.58
CD47-204ENST00000471694 Q1T7F1 81 aa5.15□□□□□ -1.58
CD47-204ENST00000471694 PRO0461Q9UI25 63 aa5.15□□□□□ -1.59
CD47-204ENST00000471694 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
CD47-204ENST00000471694 USP24Q9UPU5 2620 aa5.13□□□□□ -1.59
CD47-204ENST00000471694 ADM2Q7Z4H4 148 aa5.13□□□□□ -1.59
CD47-204ENST00000471694 HELZ2Q9BYK8 2649 aaKnown RBP5.12□□□□□ -1.59
CD47-204ENST00000471694 Q6ZR54 194 aa5.12□□□□□ -1.59
CD47-204ENST00000471694 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
CD47-204ENST00000471694 Q5W150 140 aa5.11□□□□□ -1.59
CD47-204ENST00000471694 Q8N9P0 234 aaPredicted RBP5.11□□□□□ -1.59
CD47-204ENST00000471694 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
CD47-204ENST00000471694 H7BZZ5 65 aa5.09□□□□□ -1.59
CD47-204ENST00000471694 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
CD47-204ENST00000471694 MMP24-AS1A0A0U1RRL7 71 aa5.07□□□□□ -1.6
CD47-204ENST00000471694 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
CD47-204ENST00000471694 ITPR3Q14573 2671 aa5.04□□□□□ -1.6
CD47-204ENST00000471694 A0A087X002 238 aa5.03□□□□□ -1.6
CD47-204ENST00000471694 PANO1I0J062 215 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms