RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 C7orf33Q8WU49 177 aa12.08□□□□□ -0.48
COL20A1-205ENST00000471582 ATP5EP2Q5VTU8 51 aa12.07□□□□□ -0.48
COL20A1-205ENST00000471582 DSCR8Q96T75 97 aa12.06□□□□□ -0.48
COL20A1-205ENST00000471582 UBE2DNLQ8IWF7 75 aa12.05□□□□□ -0.48
COL20A1-205ENST00000471582 APLNQ9ULZ1 77 aa12.05□□□□□ -0.48
COL20A1-205ENST00000471582 FBN3Q75N90 2809 aa12.05□□□□□ -0.48
COL20A1-205ENST00000471582 NUPR2A6NF83 97 aa12.04□□□□□ -0.48
COL20A1-205ENST00000471582 LOC107984640A0A0U1RRK4 108 aa12.03□□□□□ -0.48
COL20A1-205ENST00000471582 UBL5Q9BZL1 73 aa12.03□□□□□ -0.48
COL20A1-205ENST00000471582 IGKV3D-7A0A0C4DH55 119 aa12.02□□□□□ -0.49
COL20A1-205ENST00000471582 HIST1H4AP62805 103 aaKnown RBP12.02□□□□□ -0.49
COL20A1-205ENST00000471582 PRYO14603 147 aa12.01□□□□□ -0.49
COL20A1-205ENST00000471582 TRBV7-4A0A0J9YYF1 115 aa12.01□□□□□ -0.49
COL20A1-205ENST00000471582 KRTAP1-5Q9BYS1 174 aa12□□□□□ -0.49
COL20A1-205ENST00000471582 IGLV1-50A0A075B6I6 118 aa11.99□□□□□ -0.49
COL20A1-205ENST00000471582 FAM168BA1KXE4 195 aa11.98□□□□□ -0.49
COL20A1-205ENST00000471582 CCDC179H3BU77 68 aa11.98□□□□□ -0.49
COL20A1-205ENST00000471582 SPRR1AP35321 89 aa11.98□□□□□ -0.49
COL20A1-205ENST00000471582 KRTAP4-16G5E9R7 235 aaPredicted RBP11.98□□□□□ -0.49
COL20A1-205ENST00000471582 DHRS4-AS1Q9P1J3 65 aa11.98□□□□□ -0.49
COL20A1-205ENST00000471582 Q6ZRX8 168 aa11.97□□□□□ -0.49
COL20A1-205ENST00000471582 KRTAP7-1Q8IUC3 87 aa11.97□□□□□ -0.49
COL20A1-205ENST00000471582 DYNC2H1Q8NCM8 4307 aaKnown RBP11.96□□□□□ -0.49
COL20A1-205ENST00000471582 CNBPP62633 177 aaKnown RBP11.96□□□□□ -0.49
COL20A1-205ENST00000471582 ATOX1O00244 68 aa11.96□□□□□ -0.5
COL20A1-205ENST00000471582 MRPL55Q7Z7F7 128 aaKnown RBP11.96□□□□□ -0.5
COL20A1-205ENST00000471582 B5MCH6 92 aa11.94□□□□□ -0.5
COL20A1-205ENST00000471582 RPL37AP8A6NKH3 93 aa11.94□□□□□ -0.5
COL20A1-205ENST00000471582 M0R2N4 97 aa11.94□□□□□ -0.5
COL20A1-205ENST00000471582 ETDCA0A1B0GVM5 59 aa11.92□□□□□ -0.5
COL20A1-205ENST00000471582 PSCAO43653 123 aa11.92□□□□□ -0.5
COL20A1-205ENST00000471582 FAM19A5Q7Z5A7 132 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-205ENST00000471582 C14orf177Q52M58 125 aa11.92□□□□□ -0.5
COL20A1-205ENST00000471582 TGP01266 2768 aa11.91□□□□□ -0.5
COL20A1-205ENST00000471582 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
COL20A1-205ENST00000471582 A0A087WVE0 104 aa11.9□□□□□ -0.5
COL20A1-205ENST00000471582 C16orf90A8MZG2 172 aa11.9□□□□□ -0.5
COL20A1-205ENST00000471582 Q6ZVQ6 151 aa11.9□□□□□ -0.5
COL20A1-205ENST00000471582 Q9BRP9 147 aa11.9□□□□□ -0.51
COL20A1-205ENST00000471582 DNAH7Q8WXX0 4024 aa11.88□□□□□ -0.51
COL20A1-205ENST00000471582 UQCRQO14949 82 aa11.88□□□□□ -0.51
COL20A1-205ENST00000471582 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
COL20A1-205ENST00000471582 Q8N377 158 aa11.88□□□□□ -0.51
COL20A1-205ENST00000471582 LYSTQ99698 3801 aa11.87□□□□□ -0.51
COL20A1-205ENST00000471582 C3orf22Q8N5N4 141 aa11.87□□□□□ -0.51
COL20A1-205ENST00000471582 A0A096LNI7 61 aa11.86□□□□□ -0.51
COL20A1-205ENST00000471582 CXCL6P80162 114 aa11.86□□□□□ -0.51
COL20A1-205ENST00000471582 IGLV5-48A0A075B6I7 105 aa11.86□□□□□ -0.51
COL20A1-205ENST00000471582 COX7CP15954 63 aa11.85□□□□□ -0.51
COL20A1-205ENST00000471582 REG3GQ6UW15 175 aa11.85□□□□□ -0.51
COL20A1-205ENST00000471582 NBDYA0A0U1RRE5 68 aa11.84□□□□□ -0.51
COL20A1-205ENST00000471582 FAM19A1Q7Z5A9 133 aa11.84□□□□□ -0.51
COL20A1-205ENST00000471582 DEFB105AQ8NG35 78 aa11.84□□□□□ -0.51
COL20A1-205ENST00000471582 HAMPP81172 84 aa11.82□□□□□ -0.52
COL20A1-205ENST00000471582 STARD9Q9P2P6 4700 aa11.81□□□□□ -0.52
COL20A1-205ENST00000471582 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
COL20A1-205ENST00000471582 PKIGQ9Y2B9 76 aa11.81□□□□□ -0.52
COL20A1-205ENST00000471582 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
COL20A1-205ENST00000471582 IGKV2-24A0A0C4DH68 120 aa11.8□□□□□ -0.52
COL20A1-205ENST00000471582 C9orf153Q5TBE3 101 aa11.8□□□□□ -0.52
COL20A1-205ENST00000471582 SERP2Q8N6R1 65 aa11.8□□□□□ -0.52
COL20A1-205ENST00000471582 A0A1B0GW54 56 aa11.79□□□□□ -0.52
COL20A1-205ENST00000471582 UBE2BP63146 152 aa11.79□□□□□ -0.52
COL20A1-205ENST00000471582 TNP2Q05952 138 aa11.79□□□□□ -0.52
COL20A1-205ENST00000471582 A0A1W2PNN7 141 aa11.78□□□□□ -0.52
COL20A1-205ENST00000471582 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
COL20A1-205ENST00000471582 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.78□□□□□ -0.52
COL20A1-205ENST00000471582 PLECQ15149 4684 aaKnown RBP11.77□□□□□ -0.52
COL20A1-205ENST00000471582 ST20-AS1Q8NBB2 130 aa11.77□□□□□ -0.53
COL20A1-205ENST00000471582 ERC2-IT1O76042 136 aa11.76□□□□□ -0.53
COL20A1-205ENST00000471582 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
COL20A1-205ENST00000471582 CRYGAP11844 174 aa11.76□□□□□ -0.53
COL20A1-205ENST00000471582 Q6ZRN7 208 aaPredicted RBP11.76□□□□□ -0.53
COL20A1-205ENST00000471582 SS18L2Q9UHA2 77 aa11.76□□□□□ -0.53
COL20A1-205ENST00000471582 BCE1O60756 84 aa11.75□□□□□ -0.53
COL20A1-205ENST00000471582 WWC2-AS2Q96NR7 200 aa11.74□□□□□ -0.53
COL20A1-205ENST00000471582 FUSP35637 526 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL20A1-205ENST00000471582 C1orf137Q5JT78 98 aa11.72□□□□□ -0.53
COL20A1-205ENST00000471582 NREPQ16612 68 aa11.71□□□□□ -0.53
COL20A1-205ENST00000471582 LINC00474Q9P2X8 69 aa11.71□□□□□ -0.53
COL20A1-205ENST00000471582 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
COL20A1-205ENST00000471582 Q8NBF4 154 aa11.69□□□□□ -0.54
COL20A1-205ENST00000471582 A0A1W2PNM2 257 aa11.68□□□□□ -0.54
COL20A1-205ENST00000471582 SMIM29Q86T20 159 aa11.68□□□□□ -0.54
COL20A1-205ENST00000471582 H0Y9J4 135 aa11.68□□□□□ -0.54
COL20A1-205ENST00000471582 C3orf84H3BNL1 204 aa11.67□□□□□ -0.54
COL20A1-205ENST00000471582 PRLHP81277 87 aa11.67□□□□□ -0.54
COL20A1-205ENST00000471582 SMIM20Q8N5G0 67 aa11.67□□□□□ -0.54
COL20A1-205ENST00000471582 SPRR4Q96PI1 79 aa11.67□□□□□ -0.54
COL20A1-205ENST00000471582 SCXQ7RTU7 201 aa11.66□□□□□ -0.54
COL20A1-205ENST00000471582 PHF5AQ7RTV0 110 aaKnown RBP11.66□□□□□ -0.54
COL20A1-205ENST00000471582 F8WEM9 126 aa11.65□□□□□ -0.54
COL20A1-205ENST00000471582 VPS13DQ5THJ4 4388 aa11.65□□□□□ -0.54
COL20A1-205ENST00000471582 BPY2O14599 106 aa11.63□□□□□ -0.55
COL20A1-205ENST00000471582 TRAV7A0A075B6U4 112 aa11.62□□□□□ -0.55
COL20A1-205ENST00000471582 IGLV8-61A0A075B6I0 122 aa11.62□□□□□ -0.55
COL20A1-205ENST00000471582 KRTAP11-1Q8IUC1 163 aa11.62□□□□□ -0.55
COL20A1-205ENST00000471582 HIGD2AQ9BW72 106 aa11.62□□□□□ -0.55
COL20A1-205ENST00000471582 Q6ZR54 194 aa11.61□□□□□ -0.55
COL20A1-205ENST00000471582 LINC00476Q8WZB0 136 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms