RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TMEM223A0PJW6 202 aa5.06□□□□□ -1.6
CPSF4-211ENST00000471455 TMEM218A2RU14 115 aa5.06□□□□□ -1.6
CPSF4-211ENST00000471455 C9orf153Q5TBE3 101 aa5.06□□□□□ -1.6
CPSF4-211ENST00000471455 C18orf32Q8TCD1 76 aa5.06□□□□□ -1.6
CPSF4-211ENST00000471455 TRAV12-1A0A0B4J245 112 aa5.05□□□□□ -1.6
CPSF4-211ENST00000471455 TRBV10-2A0A0K0K1G8 114 aa5.05□□□□□ -1.6
CPSF4-211ENST00000471455 MYMXA0A1B0GTQ4 84 aa5.05□□□□□ -1.6
CPSF4-211ENST00000471455 JOSD1Q15040 202 aaPredicted RBP5.05□□□□□ -1.6
CPSF4-211ENST00000471455 RHEBQ15382 184 aa5.05□□□□□ -1.6
CPSF4-211ENST00000471455 PMCHL1Q16048 86 aa5.05□□□□□ -1.6
CPSF4-211ENST00000471455 TRAPPC1Q9Y5R8 145 aa5.05□□□□□ -1.6
CPSF4-211ENST00000471455 DDTP30046 118 aa5.04□□□□□ -1.6
CPSF4-211ENST00000471455 Q6ZRX8 168 aa5.04□□□□□ -1.6
CPSF4-211ENST00000471455 Q8N9P0 234 aaPredicted RBP5.04□□□□□ -1.6
CPSF4-211ENST00000471455 MIEN1Q9BRT3 115 aa5.04□□□□□ -1.6
CPSF4-211ENST00000471455 LIMD2Q9BT23 127 aa5.04□□□□□ -1.6
CPSF4-211ENST00000471455 IFITM2Q01629 132 aa5.03□□□□□ -1.6
CPSF4-211ENST00000471455 COMMD7Q86VX2 200 aa5.03□□□□□ -1.6
CPSF4-211ENST00000471455 URB1-AS1Q96HZ7 61 aa5.03□□□□□ -1.6
CPSF4-211ENST00000471455 SPANXB1Q9NS25 103 aaPredicted RBP5.03□□□□□ -1.6
CPSF4-211ENST00000471455 CBY1Q9Y3M2 126 aa5.03□□□□□ -1.6
CPSF4-211ENST00000471455 ERC2-IT1O76042 136 aa5.02□□□□□ -1.61
CPSF4-211ENST00000471455 S100A7L2Q5SY68 101 aa5.02□□□□□ -1.61
CPSF4-211ENST00000471455 SLC25A34Q6PIV7 304 aa5.02□□□□□ -1.61
CPSF4-211ENST00000471455 IFI27L1Q96BM0 104 aa5.02□□□□□ -1.61
CPSF4-211ENST00000471455 RPS10P5Q9NQ39 176 aa5.02□□□□□ -1.61
CPSF4-211ENST00000471455 C5orf52A6NGY3 159 aa5.01□□□□□ -1.61
CPSF4-211ENST00000471455 HINT1P49773 126 aaPredicted RBP5.01□□□□□ -1.61
CPSF4-211ENST00000471455 CHCHD1Q96BP2 118 aaKnown RBP5.01□□□□□ -1.61
CPSF4-211ENST00000471455 Q9BRP9 147 aa5.01□□□□□ -1.61
CPSF4-211ENST00000471455 IGLV8-61A0A075B6I0 122 aa5□□□□□ -1.61
CPSF4-211ENST00000471455 TRAV23DV6A0A075B6W5 121 aa5□□□□□ -1.61
CPSF4-211ENST00000471455 LOC107984156A0A0G2JMH3 177 aa5□□□□□ -1.61
CPSF4-211ENST00000471455 ARL17AQ8IVW1 177 aa5□□□□□ -1.61
CPSF4-211ENST00000471455 NDUFC2O95298 119 aa4.99□□□□□ -1.61
CPSF4-211ENST00000471455 PCOTHQ58A44 107 aa4.99□□□□□ -1.61
CPSF4-211ENST00000471455 ZNF73O43830 326 aaPredicted RBP4.98□□□□□ -1.61
CPSF4-211ENST00000471455 IGLV6-57P01721 117 aa4.98□□□□□ -1.61
CPSF4-211ENST00000471455 NMUP48645 174 aa4.98□□□□□ -1.61
CPSF4-211ENST00000471455 HERVK_113P61574 105 aa4.98□□□□□ -1.61
CPSF4-211ENST00000471455 MT1HP80294 61 aa4.98□□□□□ -1.61
CPSF4-211ENST00000471455 LEPROTO15243 131 aa4.97□□□□□ -1.61
CPSF4-211ENST00000471455 HSBP1O75506 76 aa4.97□□□□□ -1.61
CPSF4-211ENST00000471455 PLNP26678 52 aa4.97□□□□□ -1.61
CPSF4-211ENST00000471455 M0R2T5 61 aa4.96□□□□□ -1.62
CPSF4-211ENST00000471455 LGALS3P17931 250 aaKnown RBP4.96□□□□□ -1.62
CPSF4-211ENST00000471455 C10orf91Q5T1B1 145 aa4.96□□□□□ -1.62
CPSF4-211ENST00000471455 SLC7A5P1Q8MH63 180 aa4.96□□□□□ -1.62
CPSF4-211ENST00000471455 LAMTOR3Q9UHA4 124 aa4.96□□□□□ -1.62
CPSF4-211ENST00000471455 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
CPSF4-211ENST00000471455 H0Y8G0 127 aa4.95□□□□□ -1.62
CPSF4-211ENST00000471455 J3QQQ9 107 aa4.95□□□□□ -1.62
CPSF4-211ENST00000471455 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
CPSF4-211ENST00000471455 DHRS4-AS1Q9P1J3 65 aa4.95□□□□□ -1.62
CPSF4-211ENST00000471455 SPRR1BP22528 89 aa4.94□□□□□ -1.62
CPSF4-211ENST00000471455 S100A1P23297 94 aa4.94□□□□□ -1.62
CPSF4-211ENST00000471455 TSPEAR-AS2P59090 65 aa4.94□□□□□ -1.62
CPSF4-211ENST00000471455 CD164Q04900 197 aa4.94□□□□□ -1.62
CPSF4-211ENST00000471455 NDUFA5Q16718 116 aa4.94□□□□□ -1.62
CPSF4-211ENST00000471455 COX6B2Q6YFQ2 88 aa4.94□□□□□ -1.62
CPSF4-211ENST00000471455 ST20-AS1Q8NBB2 130 aa4.94□□□□□ -1.62
CPSF4-211ENST00000471455 KRTAP10-6P60371 365 aaPredicted RBP4.93□□□□□ -1.62
CPSF4-211ENST00000471455 HRCT1Q6UXD1 115 aa4.93□□□□□ -1.62
CPSF4-211ENST00000471455 DPM2O94777 84 aa4.92□□□□□ -1.62
CPSF4-211ENST00000471455 LEPROTL1O95214 131 aa4.92□□□□□ -1.62
CPSF4-211ENST00000471455 SNAPINO95295 136 aa4.92□□□□□ -1.62
CPSF4-211ENST00000471455 SVBPQ8N300 66 aa4.92□□□□□ -1.62
CPSF4-211ENST00000471455 PRO1933Q9H354 126 aa4.92□□□□□ -1.62
CPSF4-211ENST00000471455 HSPB8Q9UJY1 196 aa4.92□□□□□ -1.62
CPSF4-211ENST00000471455 H7C2G1 150 aa4.91□□□□□ -1.62
CPSF4-211ENST00000471455 IGKV2-30P06310 120 aa4.91□□□□□ -1.62
CPSF4-211ENST00000471455 OR13C6PQ8NH95 151 aa4.91□□□□□ -1.62
CPSF4-211ENST00000471455 SPANXCQ9NY87 97 aa4.91□□□□□ -1.62
CPSF4-211ENST00000471455 IGKCP01834 107 aa4.9□□□□□ -1.63
CPSF4-211ENST00000471455 APOC3P02656 99 aa4.9□□□□□ -1.63
CPSF4-211ENST00000471455 NPC2P61916 151 aa4.9□□□□□ -1.63
CPSF4-211ENST00000471455 Q5XG85 94 aa4.9□□□□□ -1.63
CPSF4-211ENST00000471455 SPANXDQ9BXN6 97 aa4.9□□□□□ -1.63
CPSF4-211ENST00000471455 A0A0J9YXY3 114 aa4.89□□□□□ -1.63
CPSF4-211ENST00000471455 RPL37P61927 97 aaKnown RBP4.89□□□□□ -1.63
CPSF4-211ENST00000471455 TAL2Q16559 108 aa4.89□□□□□ -1.63
CPSF4-211ENST00000471455 TEX49A0A1B0GTD5 131 aa4.88□□□□□ -1.63
CPSF4-211ENST00000471455 COX7BP24311 80 aa4.88□□□□□ -1.63
CPSF4-211ENST00000471455 AKR1D1P51857 326 aa4.88□□□□□ -1.63
CPSF4-211ENST00000471455 SOSTDC1Q6X4U4 206 aa4.88□□□□□ -1.63
CPSF4-211ENST00000471455 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
CPSF4-211ENST00000471455 Q1RN00 199 aa4.87□□□□□ -1.63
CPSF4-211ENST00000471455 LINC00518Q8N0U6 118 aa4.87□□□□□ -1.63
CPSF4-211ENST00000471455 E9PLD3 99 aa4.86□□□□□ -1.63
CPSF4-211ENST00000471455 TIMM17BO60830 172 aa4.86□□□□□ -1.63
CPSF4-211ENST00000471455 TCL1BO95988 128 aa4.86□□□□□ -1.63
CPSF4-211ENST00000471455 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
CPSF4-211ENST00000471455 DEFB105AQ8NG35 78 aa4.86□□□□□ -1.63
CPSF4-211ENST00000471455 LINC00308Q8TCZ7 52 aa4.86□□□□□ -1.63
CPSF4-211ENST00000471455 SERF1AO75920 110 aa4.85□□□□□ -1.63
CPSF4-211ENST00000471455 FABP4P15090 132 aa4.85□□□□□ -1.63
CPSF4-211ENST00000471455 C6orf99Q4VX62 202 aa4.85□□□□□ -1.63
CPSF4-211ENST00000471455 C1orf195Q5TG92 126 aa4.85□□□□□ -1.63
CPSF4-211ENST00000471455 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
CPSF4-211ENST00000471455 PMCHL2Q9BQD1 86 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms