RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 NBDYA0A0U1RRE5 68 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 COX7A2LO14548 114 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 XCL1P47992 114 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 COX6A2Q02221 97 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 CLPSL2Q6UWE3 100 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 VAMP8Q9BV40 100 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 CDKN2A-AS1Q9UH64 79 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 STARD9Q9P2P6 4700 aa2.83□□□□□ -1.96
CCDC39-202ENST00000471307 IGLV10-54A0A075B6I4 117 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 IGHV1-58A0A0C4DH39 117 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 APOMO95445 188 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 LY6G6CO95867 125 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 KRTAP26-1Q6PEX3 210 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 C5orf38Q86SI9 138 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 ATOH7Q8N100 152 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 PLEKHB2Q96CS7 222 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 C12orf57Q99622 126 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 SND1-IT1Q9HBX3 110 aa2.82□□□□□ -1.96
CCDC39-202ENST00000471307 IGHV3-64A0A075B6Q5 118 aa2.81□□□□□ -1.96
CCDC39-202ENST00000471307 LEPROTO15243 131 aa2.81□□□□□ -1.96
CCDC39-202ENST00000471307 SPATA45Q537H7 98 aa2.81□□□□□ -1.96
CCDC39-202ENST00000471307 DNAH1Q9P2D7 4330 aa2.81□□□□□ -1.96
CCDC39-202ENST00000471307 LYSTQ99698 3801 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 J3QQQ9 107 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 M0R2N4 97 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 DLEU1O43261 78 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 PSCAO43653 123 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 SPINK8P0C7L1 97 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 LGALS3P17931 250 aaKnown RBP2.8□□□□□ -1.96
CCDC39-202ENST00000471307 C1orf134Q5TEV5 83 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 SFTA2Q6UW10 78 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 Q6ZRU5 148 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 Q8IZM0 81 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 COX7B2Q8TF08 81 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 DNAH6Q9C0G6 4158 aa2.8□□□□□ -1.96
CCDC39-202ENST00000471307 ALMS1Q8TCU4 4167 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 GVQW2A0A096LPI5 108 aaPredicted RBP2.79□□□□□ -1.96
CCDC39-202ENST00000471307 IGKV2D-26A0A0A0MRZ7 120 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 LCE6AA0A183 80 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 MYMXA0A1B0GTQ4 84 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 LINC00587B1AMM8 73 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 COX8AP10176 69 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 CKS1BP61024 79 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 SLC25A34Q6PIV7 304 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 Q6ZRN7 208 aaPredicted RBP2.79□□□□□ -1.96
CCDC39-202ENST00000471307 CIRBP-AS1Q8TBR5 109 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 C14orf144Q96I85 54 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 TOMM7Q9P0U1 55 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 NDUFA12Q9UI09 145 aa2.79□□□□□ -1.96
CCDC39-202ENST00000471307 ZNF815PA8K554 130 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 TSTD3H0UI37 97 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 NDUFA1O15239 70 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 TSPEAR-AS2P59090 65 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 SPAG11BQ08648 103 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 CIRBPQ14011 172 aaKnown RBP2.78□□□□□ -1.96
CCDC39-202ENST00000471307 MIR7-3HGQ8N6C7 128 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 ZNF625Q96I27 306 aaPredicted RBP2.78□□□□□ -1.96
CCDC39-202ENST00000471307 MIEN1Q9BRT3 115 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 KMT2AQ03164 3969 aa2.78□□□□□ -1.96
CCDC39-202ENST00000471307 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-202ENST00000471307 TRBV30A0A0K0K1B3 111 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 TIMM17BO60830 172 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 PMAIP1Q13794 54 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 COX17Q14061 63 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 SIGMAR1Q99720 223 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 TTTY13Q9BZ97 58 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 PRO1933Q9H354 126 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 HIGD1BQ9P298 99 aa2.77□□□□□ -1.97
CCDC39-202ENST00000471307 A0A087WTM6 91 aa2.76□□□□□ -1.97
CCDC39-202ENST00000471307 CNBPP62633 177 aaKnown RBP2.76□□□□□ -1.97
CCDC39-202ENST00000471307 MEIG1Q5JSS6 88 aa2.76□□□□□ -1.97
CCDC39-202ENST00000471307 C2orf82Q6UX34 121 aa2.76□□□□□ -1.97
CCDC39-202ENST00000471307 UNQ6190/PRO20217Q6UXQ8 127 aa2.76□□□□□ -1.97
CCDC39-202ENST00000471307 TMEM238C9JI98 176 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 LECT2O14960 151 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 IGLV7-43P04211 117 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 IFITM1P13164 125 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 LINC00158P58513 81 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 WFDC2Q14508 124 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 Q5W150 140 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 Q8N814 137 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 SPANXA2-OT1Q8N9U9 137 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 COPS9Q8WXC6 57 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 LINC00526Q96FQ7 95 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 CARD19Q96LW7 228 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 C6orf48Q9UBA6 75 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 ERG28Q9UKR5 140 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 PKIGQ9Y2B9 76 aa2.75□□□□□ -1.97
CCDC39-202ENST00000471307 DNAH2Q9P225 4427 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 LOC107984156A0A0G2JMH3 177 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 SMIM13P0DJ93 91 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 C9orf116Q5BN46 136 aaPredicted RBP2.74□□□□□ -1.97
CCDC39-202ENST00000471307 C2orf91Q6ZV80 131 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 ARL17AQ8IVW1 177 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 C9orf163Q8N9P6 203 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 SPANXDQ9BXN6 97 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 SPANXCQ9NY87 97 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 TP73-AS1Q9UF72 201 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms