RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 Q6ZSA8 131 aa6.14□□□□□ -1.43
CCM2-204ENST00000470837 GTF2H5Q6ZYL4 71 aa6.14□□□□□ -1.43
CCM2-204ENST00000470837 SPCS1Q9Y6A9 102 aa6.14□□□□□ -1.43
CCM2-204ENST00000470837 DNAH17Q9UFH2 4485 aa6.14□□□□□ -1.43
CCM2-204ENST00000470837 KMT2CQ8NEZ4 4911 aaKnown RBP6.13□□□□□ -1.43
CCM2-204ENST00000470837 EPM2AB3EWF7 344 aa6.13□□□□□ -1.43
CCM2-204ENST00000470837 ATXN8Q156A1 80 aa6.13□□□□□ -1.43
CCM2-204ENST00000470837 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
CCM2-204ENST00000470837 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
CCM2-204ENST00000470837 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
CCM2-204ENST00000470837 DNAL4O96015 105 aa6.12□□□□□ -1.43
CCM2-204ENST00000470837 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
CCM2-204ENST00000470837 RYR2Q92736 4967 aa6.12□□□□□ -1.43
CCM2-204ENST00000470837 UBE2AP49459 152 aa6.11□□□□□ -1.43
CCM2-204ENST00000470837 A0A1B0GV90 55 aa6.1□□□□□ -1.43
CCM2-204ENST00000470837 A0A1B0GX51 115 aa6.1□□□□□ -1.43
CCM2-204ENST00000470837 BCE1O60756 84 aa6.1□□□□□ -1.43
CCM2-204ENST00000470837 ELOF1P60002 83 aaKnown RBP6.1□□□□□ -1.43
CCM2-204ENST00000470837 CLEC2BQ92478 149 aa6.1□□□□□ -1.43
CCM2-204ENST00000470837 DHRS4-AS1Q9P1J3 65 aa6.1□□□□□ -1.43
CCM2-204ENST00000470837 hADV29S1A0JD25 119 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 K7EP34 96 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 TCL1BO95988 128 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 GHRHP01286 108 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 INAFM2P0DMQ5 153 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 SPRR1AP35321 89 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 C1orf137Q5JT78 98 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 Q6ZRX8 168 aa6.09□□□□□ -1.43
CCM2-204ENST00000470837 B5MCH6 92 aa6.08□□□□□ -1.44
CCM2-204ENST00000470837 LST1O00453 97 aa6.08□□□□□ -1.44
CCM2-204ENST00000470837 HAMPP81172 84 aa6.08□□□□□ -1.44
CCM2-204ENST00000470837 LINC00575Q6W349 94 aa6.08□□□□□ -1.44
CCM2-204ENST00000470837 FRAS1Q86XX4 4008 aa6.08□□□□□ -1.44
CCM2-204ENST00000470837 H3BMG7 143 aa6.07□□□□□ -1.44
CCM2-204ENST00000470837 TRACP01848 142 aa6.07□□□□□ -1.44
CCM2-204ENST00000470837 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
CCM2-204ENST00000470837 PSORS1C2Q9UIG4 136 aa6.07□□□□□ -1.44
CCM2-204ENST00000470837 H0Y9J4 135 aa6.06□□□□□ -1.44
CCM2-204ENST00000470837 PRLHP81277 87 aa6.06□□□□□ -1.44
CCM2-204ENST00000470837 HIGD2AQ9BW72 106 aa6.06□□□□□ -1.44
CCM2-204ENST00000470837 FAT2Q9NYQ8 4349 aa6.06□□□□□ -1.44
CCM2-204ENST00000470837 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
CCM2-204ENST00000470837 H3BQ85 93 aa6.05□□□□□ -1.44
CCM2-204ENST00000470837 UBE2V1Q13404 147 aa6.05□□□□□ -1.44
CCM2-204ENST00000470837 OCIAD2Q56VL3 154 aa6.05□□□□□ -1.44
CCM2-204ENST00000470837 KRTAP11-1Q8IUC1 163 aa6.05□□□□□ -1.44
CCM2-204ENST00000470837 FAM218AQ96MZ4 157 aa6.05□□□□□ -1.44
CCM2-204ENST00000470837 ORMDL1Q9P0S3 153 aa6.05□□□□□ -1.44
CCM2-204ENST00000470837 HECTD4Q9Y4D8 3996 aa6.04□□□□□ -1.44
CCM2-204ENST00000470837 C9JAW5 83 aa6.04□□□□□ -1.44
CCM2-204ENST00000470837 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.04□□□□□ -1.44
CCM2-204ENST00000470837 XGP55808 180 aa6.03□□□□□ -1.44
CCM2-204ENST00000470837 RPL37AP61513 92 aaKnown RBP6.03□□□□□ -1.44
CCM2-204ENST00000470837 Q6ZQY7 126 aa6.03□□□□□ -1.44
CCM2-204ENST00000470837 DNAH11Q96DT5 4516 aa6.03□□□□□ -1.44
CCM2-204ENST00000470837 F8W1H4 67 aa6.02□□□□□ -1.45
CCM2-204ENST00000470837 ZNF861PO60384 105 aa6.02□□□□□ -1.45
CCM2-204ENST00000470837 CDK2AP2O75956 126 aa6.02□□□□□ -1.45
CCM2-204ENST00000470837 IGLV7-43P04211 117 aa6.02□□□□□ -1.45
CCM2-204ENST00000470837 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.45
CCM2-204ENST00000470837 Q9BRP9 147 aa6.02□□□□□ -1.45
CCM2-204ENST00000470837 ZNF706Q9Y5V0 76 aaPredicted RBP6.02□□□□□ -1.45
CCM2-204ENST00000470837 PKD1P98161 4303 aa6.02□□□□□ -1.45
CCM2-204ENST00000470837 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
CCM2-204ENST00000470837 TMEM256-PLSCR3K7ERE1 68 aa6.01□□□□□ -1.45
CCM2-204ENST00000470837 SMR3BP02814 79 aaPredicted RBP6.01□□□□□ -1.45
CCM2-204ENST00000470837 BAALC-AS2P0C853 105 aa6.01□□□□□ -1.45
CCM2-204ENST00000470837 DEFB105AQ8NG35 78 aa6.01□□□□□ -1.45
CCM2-204ENST00000470837 RYR3Q15413 4870 aa6□□□□□ -1.45
CCM2-204ENST00000470837 H3BT86 120 aa6□□□□□ -1.45
CCM2-204ENST00000470837 PLA2G1BP04054 148 aaKnown RBP5.99□□□□□ -1.45
CCM2-204ENST00000470837 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
CCM2-204ENST00000470837 ANKRD29Q8N6D5 301 aa5.99□□□□□ -1.45
CCM2-204ENST00000470837 PPDPFLQ8WWR9 84 aa5.99□□□□□ -1.45
CCM2-204ENST00000470837 DNAH5Q8TE73 4624 aa5.98□□□□□ -1.45
CCM2-204ENST00000470837 TEX49A0A1B0GTD5 131 aa5.98□□□□□ -1.45
CCM2-204ENST00000470837 KRTAP13-1Q8IUC0 172 aa5.98□□□□□ -1.45
CCM2-204ENST00000470837 LAMTOR3Q9UHA4 124 aa5.98□□□□□ -1.45
CCM2-204ENST00000470837 F8WEM9 126 aa5.97□□□□□ -1.45
CCM2-204ENST00000470837 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
CCM2-204ENST00000470837 GAGE2AQ6NT46 116 aa5.97□□□□□ -1.45
CCM2-204ENST00000470837 ST20-AS1Q8NBB2 130 aa5.97□□□□□ -1.45
CCM2-204ENST00000470837 IGLV5-48A0A075B6I7 105 aa5.94□□□□□ -1.46
CCM2-204ENST00000470837 JMJD7-PLA2G4BH0Y9G9 81 aa5.94□□□□□ -1.46
CCM2-204ENST00000470837 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
CCM2-204ENST00000470837 PRO0461Q9UI25 63 aa5.94□□□□□ -1.46
CCM2-204ENST00000470837 NDUFV3P56181 108 aaKnown RBP5.93□□□□□ -1.46
CCM2-204ENST00000470837 Q8N377 158 aa5.93□□□□□ -1.46
CCM2-204ENST00000470837 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
CCM2-204ENST00000470837 LRP1BQ9NZR2 4599 aa5.93□□□□□ -1.46
CCM2-204ENST00000470837 DYNC1H1Q14204 4646 aaKnown RBP5.93□□□□□ -1.46
CCM2-204ENST00000470837 PKHD1P08F94 4074 aa5.93□□□□□ -1.46
CCM2-204ENST00000470837 Q5VSD8 79 aa5.92□□□□□ -1.46
CCM2-204ENST00000470837 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
CCM2-204ENST00000470837 A0A1B0GV72 72 aa5.91□□□□□ -1.46
CCM2-204ENST00000470837 SPRR1BP22528 89 aa5.91□□□□□ -1.46
CCM2-204ENST00000470837 SMCPP49901 116 aaPredicted RBP5.91□□□□□ -1.46
CCM2-204ENST00000470837 LINC01547P58512 204 aaPredicted RBP5.91□□□□□ -1.46
CCM2-204ENST00000470837 RBM3P98179 157 aaKnown RBP5.91□□□□□ -1.46
CCM2-204ENST00000470837 ETDBQ3ZM63 59 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms