RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 EIF4EBP3O60516 100 aaPredicted RBP17.66■□□□□ 0.42
HMG20B-209ENST00000470356 JOSD1Q15040 202 aaPredicted RBP17.66■□□□□ 0.42
HMG20B-209ENST00000470356 RPS29P62273 56 aaKnown RBP17.65■□□□□ 0.42
HMG20B-209ENST00000470356 NPC2P61916 151 aa17.63■□□□□ 0.41
HMG20B-209ENST00000470356 ZNF73O43830 326 aaPredicted RBP17.62■□□□□ 0.41
HMG20B-209ENST00000470356 Q8N377 158 aa17.59■□□□□ 0.41
HMG20B-209ENST00000470356 SYS1-DBNDD2H3BUS1 97 aa17.58■□□□□ 0.4
HMG20B-209ENST00000470356 CBY1Q9Y3M2 126 aa17.57■□□□□ 0.4
HMG20B-209ENST00000470356 SLC25A20O43772 301 aa17.55■□□□□ 0.4
HMG20B-209ENST00000470356 C5orf52A6NGY3 159 aa17.54■□□□□ 0.4
HMG20B-209ENST00000470356 ASB16-AS1Q495Z4 193 aa17.54■□□□□ 0.4
HMG20B-209ENST00000470356 LITAFQ99732 161 aa17.54■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BKO60814 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BJP06899 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BOP23527 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BBP33778 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HINT1P49773 126 aaPredicted RBP17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BDP58876 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BCP62807 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST2H2BEQ16778 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.53■□□□□ 0.4
HMG20B-209ENST00000470356 LINC00308Q8TCZ7 52 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BHQ93079 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BNQ99877 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 HIST1H2BMQ99879 126 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 SPANXCQ9NY87 97 aa17.53■□□□□ 0.4
HMG20B-209ENST00000470356 TIMM17BO60830 172 aa17.51■□□□□ 0.39
HMG20B-209ENST00000470356 C9orf153Q5TBE3 101 aa17.51■□□□□ 0.39
HMG20B-209ENST00000470356 LINC01545Q5VT33 79 aa17.51■□□□□ 0.39
HMG20B-209ENST00000470356 ST20-AS1Q8NBB2 130 aa17.51■□□□□ 0.39
HMG20B-209ENST00000470356 KRTAP9-2Q9BYQ4 174 aa17.5■□□□□ 0.39
HMG20B-209ENST00000470356 PET117Q6UWS5 81 aa17.47■□□□□ 0.39
HMG20B-209ENST00000470356 OR13C6PQ8NH95 151 aa17.47■□□□□ 0.39
HMG20B-209ENST00000470356 SEC61BP60468 96 aaKnown RBP17.44■□□□□ 0.38
HMG20B-209ENST00000470356 ZNF815PA8K554 130 aa17.43■□□□□ 0.38
HMG20B-209ENST00000470356 SPANXDQ9BXN6 97 aa17.43■□□□□ 0.38
HMG20B-209ENST00000470356 SPRR1BP22528 89 aa17.42■□□□□ 0.38
HMG20B-209ENST00000470356 DHRS4-AS1Q9P1J3 65 aa17.42■□□□□ 0.38
HMG20B-209ENST00000470356 SLC25A34Q6PIV7 304 aa17.38■□□□□ 0.37
HMG20B-209ENST00000470356 TTTY13Q9BZ97 58 aa17.38■□□□□ 0.37
HMG20B-209ENST00000470356 LINC00518Q8N0U6 118 aa17.37■□□□□ 0.37
HMG20B-209ENST00000470356 C3orf79P0CE67 100 aa17.36■□□□□ 0.37
HMG20B-209ENST00000470356 KRTAP4-1Q9BYQ7 146 aa17.36■□□□□ 0.37
HMG20B-209ENST00000470356 XP32Q5T750 250 aa17.34■□□□□ 0.37
HMG20B-209ENST00000470356 COX7BP24311 80 aa17.32■□□□□ 0.36
HMG20B-209ENST00000470356 ELOF1P60002 83 aaKnown RBP17.32■□□□□ 0.36
HMG20B-209ENST00000470356 C6orf99Q4VX62 202 aa17.31■□□□□ 0.36
HMG20B-209ENST00000470356 LAMTOR3Q9UHA4 124 aa17.31■□□□□ 0.36
HMG20B-209ENST00000470356 COA6Q5JTJ3 125 aaKnown RBP17.3■□□□□ 0.36
HMG20B-209ENST00000470356 KRTDAPP60985 99 aa17.28■□□□□ 0.36
HMG20B-209ENST00000470356 LIMD2Q9BT23 127 aa17.27■□□□□ 0.36
HMG20B-209ENST00000470356 HRCT1Q6UXD1 115 aa17.25■□□□□ 0.35
HMG20B-209ENST00000470356 SCGB1D4Q6XE38 83 aa17.25■□□□□ 0.35
HMG20B-209ENST00000470356 TRBV7-6A0A0J9YX20 115 aa17.24■□□□□ 0.35
HMG20B-209ENST00000470356 LINC01547P58512 204 aaPredicted RBP17.24■□□□□ 0.35
HMG20B-209ENST00000470356 TAL2Q16559 108 aa17.23■□□□□ 0.35
HMG20B-209ENST00000470356 COPS9Q8WXC6 57 aa17.22■□□□□ 0.35
HMG20B-209ENST00000470356 C20orf202A1L168 122 aa17.2■□□□□ 0.34
HMG20B-209ENST00000470356 IFITM1P13164 125 aa17.2■□□□□ 0.34
HMG20B-209ENST00000470356 ANKRD39Q53RE8 183 aa17.2■□□□□ 0.34
HMG20B-209ENST00000470356 DEFB105AQ8NG35 78 aa17.2■□□□□ 0.34
HMG20B-209ENST00000470356 TEX49A0A1B0GTD5 131 aa17.19■□□□□ 0.34
HMG20B-209ENST00000470356 Q1RN00 199 aa17.19■□□□□ 0.34
HMG20B-209ENST00000470356 CD164Q04900 197 aa17.18■□□□□ 0.34
HMG20B-209ENST00000470356 Q6ZVH6 145 aa17.17■□□□□ 0.34
HMG20B-209ENST00000470356 A0A1B0GWB2 263 aa17.16■□□□□ 0.34
HMG20B-209ENST00000470356 PRO1933Q9H354 126 aa17.16■□□□□ 0.34
HMG20B-209ENST00000470356 A6NDN8 102 aa17.13■□□□□ 0.33
HMG20B-209ENST00000470356 ATOH7Q8N100 152 aa17.12■□□□□ 0.33
HMG20B-209ENST00000470356 SMIM29Q86T20 159 aa17.11■□□□□ 0.33
HMG20B-209ENST00000470356 MUSTN1Q8IVN3 82 aa17.11■□□□□ 0.33
HMG20B-209ENST00000470356 PCP2Q8IVA1 136 aa17.1■□□□□ 0.33
HMG20B-209ENST00000470356 IGLV5-48A0A075B6I7 105 aa17.09■□□□□ 0.33
HMG20B-209ENST00000470356 AKR1D1P51857 326 aa17.09■□□□□ 0.33
HMG20B-209ENST00000470356 H7C2G1 150 aa17.08■□□□□ 0.32
HMG20B-209ENST00000470356 A4D1N5 150 aa17.06■□□□□ 0.32
HMG20B-209ENST00000470356 C9orf92A6NGG3 77 aa17.06■□□□□ 0.32
HMG20B-209ENST00000470356 Q5XG85 94 aa17.06■□□□□ 0.32
HMG20B-209ENST00000470356 TRAV13-2A0A0B4J235 113 aa17.02■□□□□ 0.32
HMG20B-209ENST00000470356 PCOTHQ58A44 107 aa17.01■□□□□ 0.31
HMG20B-209ENST00000470356 SNRPEP62304 92 aaKnown RBP17■□□□□ 0.31
HMG20B-209ENST00000470356 SMIM11BQ8TCY0 68 aa17■□□□□ 0.31
HMG20B-209ENST00000470356 KRTAP9-6A0A140TA67 174 aa16.99■□□□□ 0.31
HMG20B-209ENST00000470356 NHP2Q9NX24 153 aaKnown RBP16.99■□□□□ 0.31
HMG20B-209ENST00000470356 LCE2CQ5TA81 110 aa16.98■□□□□ 0.31
HMG20B-209ENST00000470356 A0A0G2JQZ4 141 aa16.96■□□□□ 0.31
HMG20B-209ENST00000470356 C1orf195Q5TG92 126 aa16.96■□□□□ 0.31
HMG20B-209ENST00000470356 IGLV8-61A0A075B6I0 122 aa16.95■□□□□ 0.3
HMG20B-209ENST00000470356 KRTAP19-2Q3LHN2 52 aa16.92■□□□□ 0.3
HMG20B-209ENST00000470356 VAMP3Q15836 100 aa16.88■□□□□ 0.29
HMG20B-209ENST00000470356 LCE2DQ5TA82 110 aaPredicted RBP16.86■□□□□ 0.29
HMG20B-209ENST00000470356 LINC00575Q6W349 94 aa16.84■□□□□ 0.29
HMG20B-209ENST00000470356 HIST3H2BBQ8N257 126 aa16.84■□□□□ 0.29
HMG20B-209ENST00000470356 HIST1H2BLQ99880 126 aa16.84■□□□□ 0.29
HMG20B-209ENST00000470356 TCL1BO95988 128 aa16.83■□□□□ 0.28
HMG20B-209ENST00000470356 HSBP1L1C9JCN9 74 aa16.81■□□□□ 0.28
HMG20B-209ENST00000470356 F8WEM9 126 aa16.81■□□□□ 0.28
HMG20B-209ENST00000470356 S100A2P29034 98 aa16.8■□□□□ 0.28
HMG20B-209ENST00000470356 RPL37P61927 97 aaKnown RBP16.77■□□□□ 0.28
HMG20B-209ENST00000470356 MT1HP80294 61 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms