RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CHTOPQ9Y3Y2 248 aaKnown RBP6.14□□□□□ -1.43
LSM2-209ENST00000470083 C20orf202A1L168 122 aa6.13□□□□□ -1.43
LSM2-209ENST00000470083 SLC25A34Q6PIV7 304 aa6.13□□□□□ -1.43
LSM2-209ENST00000470083 SPRR1BP22528 89 aa6.12□□□□□ -1.43
LSM2-209ENST00000470083 NDUFA6P56556 154 aa6.12□□□□□ -1.43
LSM2-209ENST00000470083 TMEM170BQ5T4T1 132 aa6.12□□□□□ -1.43
LSM2-209ENST00000470083 TRBV10-2A0A0K0K1G8 114 aa6.11□□□□□ -1.43
LSM2-209ENST00000470083 C11orf86A6NJI1 115 aa6.11□□□□□ -1.43
LSM2-209ENST00000470083 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
LSM2-209ENST00000470083 PEA15Q15121 130 aa6.11□□□□□ -1.43
LSM2-209ENST00000470083 H7C2G1 150 aa6.1□□□□□ -1.43
LSM2-209ENST00000470083 MEIG1Q5JSS6 88 aa6.1□□□□□ -1.43
LSM2-209ENST00000470083 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
LSM2-209ENST00000470083 ATP11AUNQ6ZP68 121 aa6.09□□□□□ -1.43
LSM2-209ENST00000470083 SMIM29Q86T20 159 aa6.09□□□□□ -1.43
LSM2-209ENST00000470083 LAMTOR3Q9UHA4 124 aa6.09□□□□□ -1.43
LSM2-209ENST00000470083 KRTAP4-8A0A0G2JLE6 195 aa6.08□□□□□ -1.44
LSM2-209ENST00000470083 TRAV23DV6A0A075B6W5 121 aa6.07□□□□□ -1.44
LSM2-209ENST00000470083 LINC00587B1AMM8 73 aa6.07□□□□□ -1.44
LSM2-209ENST00000470083 PRO1933Q9H354 126 aa6.07□□□□□ -1.44
LSM2-209ENST00000470083 SPANXB1Q9NS25 103 aaPredicted RBP6.07□□□□□ -1.44
LSM2-209ENST00000470083 LOC107984156A0A0G2JMH3 177 aa6.06□□□□□ -1.44
LSM2-209ENST00000470083 ZNF73O43830 326 aaPredicted RBP6.06□□□□□ -1.44
LSM2-209ENST00000470083 HERV-K104P63124 156 aa6.06□□□□□ -1.44
LSM2-209ENST00000470083 ANKRD39Q53RE8 183 aa6.06□□□□□ -1.44
LSM2-209ENST00000470083 Q75L30 129 aa6.06□□□□□ -1.44
LSM2-209ENST00000470083 ARL17AQ8IVW1 177 aa6.06□□□□□ -1.44
LSM2-209ENST00000470083 SCGB1D1O95968 90 aa6.05□□□□□ -1.44
LSM2-209ENST00000470083 MT-ND4LP03901 98 aa6.05□□□□□ -1.44
LSM2-209ENST00000470083 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
LSM2-209ENST00000470083 S100A7L2Q5SY68 101 aa6.05□□□□□ -1.44
LSM2-209ENST00000470083 MAP1LC3CQ9BXW4 147 aa6.05□□□□□ -1.44
LSM2-209ENST00000470083 SMCO4Q9NRQ5 59 aa6.05□□□□□ -1.44
LSM2-209ENST00000470083 A0A096LNJ9 63 aa6.04□□□□□ -1.44
LSM2-209ENST00000470083 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
LSM2-209ENST00000470083 BAGE3Q86Y29 109 aa6.04□□□□□ -1.44
LSM2-209ENST00000470083 TRBV20-1A0A075B6N2 111 aa6.03□□□□□ -1.44
LSM2-209ENST00000470083 C10orf91Q5T1B1 145 aa6.03□□□□□ -1.44
LSM2-209ENST00000470083 Q1RN00 199 aa6.02□□□□□ -1.45
LSM2-209ENST00000470083 HINT1P49773 126 aaPredicted RBP6.01□□□□□ -1.45
LSM2-209ENST00000470083 AKR1D1P51857 326 aa6.01□□□□□ -1.45
LSM2-209ENST00000470083 NDUFC2O95298 119 aa6□□□□□ -1.45
LSM2-209ENST00000470083 HBDP02042 147 aa6□□□□□ -1.45
LSM2-209ENST00000470083 DHRS4-AS1Q9P1J3 65 aa6□□□□□ -1.45
LSM2-209ENST00000470083 MYMXA0A1B0GTQ4 84 aa5.99□□□□□ -1.45
LSM2-209ENST00000470083 TCL1BO95988 128 aa5.99□□□□□ -1.45
LSM2-209ENST00000470083 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
LSM2-209ENST00000470083 MIEN1Q9BRT3 115 aa5.99□□□□□ -1.45
LSM2-209ENST00000470083 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
LSM2-209ENST00000470083 C20orf166-AS1Q96NR2 134 aa5.98□□□□□ -1.45
LSM2-209ENST00000470083 A0A0G2JQZ4 141 aa5.97□□□□□ -1.45
LSM2-209ENST00000470083 COMMD7Q86VX2 200 aa5.97□□□□□ -1.45
LSM2-209ENST00000470083 CBY1Q9Y3M2 126 aa5.97□□□□□ -1.45
LSM2-209ENST00000470083 TAL2Q16559 108 aa5.96□□□□□ -1.46
LSM2-209ENST00000470083 C6orf99Q4VX62 202 aa5.96□□□□□ -1.46
LSM2-209ENST00000470083 PET117Q6UWS5 81 aa5.96□□□□□ -1.46
LSM2-209ENST00000470083 PCP2Q8IVA1 136 aa5.96□□□□□ -1.46
LSM2-209ENST00000470083 TEX49A0A1B0GTD5 131 aa5.95□□□□□ -1.46
LSM2-209ENST00000470083 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
LSM2-209ENST00000470083 LINC00310P59036 64 aa5.95□□□□□ -1.46
LSM2-209ENST00000470083 PMCHL1Q16048 86 aa5.95□□□□□ -1.46
LSM2-209ENST00000470083 DEFB105AQ8NG35 78 aa5.95□□□□□ -1.46
LSM2-209ENST00000470083 URB1-AS1Q96HZ7 61 aa5.94□□□□□ -1.46
LSM2-209ENST00000470083 FAM236DA0A1B0GTK5 79 aa5.93□□□□□ -1.46
LSM2-209ENST00000470083 LINC00614P0C842 121 aa5.93□□□□□ -1.46
LSM2-209ENST00000470083 FAM236CP0DP71 79 aa5.93□□□□□ -1.46
LSM2-209ENST00000470083 TRAV12-1A0A0B4J245 112 aa5.92□□□□□ -1.46
LSM2-209ENST00000470083 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
LSM2-209ENST00000470083 IFITM2Q01629 132 aa5.92□□□□□ -1.46
LSM2-209ENST00000470083 ELOF1P60002 83 aaKnown RBP5.91□□□□□ -1.46
LSM2-209ENST00000470083 FABP9Q0Z7S8 132 aa5.91□□□□□ -1.46
LSM2-209ENST00000470083 SOSTDC1Q6X4U4 206 aa5.91□□□□□ -1.46
LSM2-209ENST00000470083 RPS10P5Q9NQ39 176 aa5.91□□□□□ -1.46
LSM2-209ENST00000470083 RHEBQ15382 184 aa5.89□□□□□ -1.47
LSM2-209ENST00000470083 MDN1Q9NU22 5596 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 IGLV5-48A0A075B6I7 105 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 COX7BP24311 80 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 COX19Q49B96 90 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 C18orf32Q8TCD1 76 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 Q96NJ1 140 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 SEC11CQ9BY50 192 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
LSM2-209ENST00000470083 A8MUU9 505 aa5.86□□□□□ -1.47
LSM2-209ENST00000470083 LEPROTO15243 131 aa5.86□□□□□ -1.47
LSM2-209ENST00000470083 NPC2P61916 151 aa5.86□□□□□ -1.47
LSM2-209ENST00000470083 IGFL1Q6UW32 110 aa5.86□□□□□ -1.47
LSM2-209ENST00000470083 OR13C6PQ8NH95 151 aa5.86□□□□□ -1.47
LSM2-209ENST00000470083 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
LSM2-209ENST00000470083 IFI27L1Q96BM0 104 aa5.86□□□□□ -1.47
LSM2-209ENST00000470083 S100PP25815 95 aa5.85□□□□□ -1.47
LSM2-209ENST00000470083 NMUP48645 174 aa5.85□□□□□ -1.47
LSM2-209ENST00000470083 RBM12B-AS1Q9P1G2 102 aa5.85□□□□□ -1.47
LSM2-209ENST00000470083 J3QQQ9 107 aa5.84□□□□□ -1.47
LSM2-209ENST00000470083 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
LSM2-209ENST00000470083 A4D1N5 150 aa5.83□□□□□ -1.48
LSM2-209ENST00000470083 ADAMTSL4-AS1Q5T5F5 129 aa5.83□□□□□ -1.48
LSM2-209ENST00000470083 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
LSM2-209ENST00000470083 SPANXCQ9NY87 97 aa5.83□□□□□ -1.48
LSM2-209ENST00000470083 KMT2DO14686 5537 aa5.81□□□□□ -1.48
LSM2-209ENST00000470083 TRBV7-7A0A0K0K1E9 115 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms