RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NKAPP1Q8N9T2 125 aa8.87□□□□□ -0.99
BRCA1-209ENST00000470026 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
BRCA1-209ENST00000470026 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-209ENST00000470026 KLKP1Q107X0 134 aa8.86□□□□□ -0.99
BRCA1-209ENST00000470026 Q8N377 158 aa8.86□□□□□ -0.99
BRCA1-209ENST00000470026 OXTP01178 125 aa8.85□□□□□ -0.99
BRCA1-209ENST00000470026 SPRR1AP35321 89 aa8.85□□□□□ -0.99
BRCA1-209ENST00000470026 KRTAP24-1Q3LI83 254 aa8.85□□□□□ -0.99
BRCA1-209ENST00000470026 H7BZZ5 65 aa8.84□□□□□ -0.99
BRCA1-209ENST00000470026 SCXQ7RTU7 201 aa8.84□□□□□ -0.99
BRCA1-209ENST00000470026 PRYO14603 147 aa8.83□□□□□ -1
BRCA1-209ENST00000470026 MRAPQ8TCY5 172 aa8.83□□□□□ -1
BRCA1-209ENST00000470026 Q6ZRX8 168 aa8.83□□□□□ -1
BRCA1-209ENST00000470026 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
BRCA1-209ENST00000470026 LINC00588Q9Y4M8 146 aa8.83□□□□□ -1
BRCA1-209ENST00000470026 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
BRCA1-209ENST00000470026 TENM3Q9P273 2699 aa8.82□□□□□ -1
BRCA1-209ENST00000470026 A0A1B0GW54 56 aa8.81□□□□□ -1
BRCA1-209ENST00000470026 KRTAP7-1Q8IUC3 87 aa8.81□□□□□ -1
BRCA1-209ENST00000470026 PKD1L1Q8TDX9 2849 aa8.81□□□□□ -1
BRCA1-209ENST00000470026 IGKV4-1P06312 121 aa8.81□□□□□ -1
BRCA1-209ENST00000470026 TNP2Q05952 138 aa8.81□□□□□ -1
BRCA1-209ENST00000470026 Q9BRP9 147 aa8.81□□□□□ -1
BRCA1-209ENST00000470026 EPM2AB3EWF7 344 aa8.8□□□□□ -1
BRCA1-209ENST00000470026 NREPQ16612 68 aa8.8□□□□□ -1
BRCA1-209ENST00000470026 CASC10Q5T4H9 136 aa8.8□□□□□ -1
BRCA1-209ENST00000470026 DNAH3Q8TD57 4116 aa8.79□□□□□ -1
BRCA1-209ENST00000470026 FAM236DA0A1B0GTK5 79 aa8.79□□□□□ -1
BRCA1-209ENST00000470026 FAM236CP0DP71 79 aa8.79□□□□□ -1
BRCA1-209ENST00000470026 TM2D3Q9BRN9 247 aa8.79□□□□□ -1
BRCA1-209ENST00000470026 ANK2Q01484 3957 aa8.79□□□□□ -1
BRCA1-209ENST00000470026 FAM168BA1KXE4 195 aa8.78□□□□□ -1
BRCA1-209ENST00000470026 ERC2-IT1O76042 136 aa8.78□□□□□ -1
BRCA1-209ENST00000470026 CMYA5Q8N3K9 4069 aa8.78□□□□□ -1
BRCA1-209ENST00000470026 DNAH1Q9P2D7 4330 aa8.77□□□□□ -1
BRCA1-209ENST00000470026 DEFB105AQ8NG35 78 aa8.77□□□□□ -1.01
BRCA1-209ENST00000470026 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
BRCA1-209ENST00000470026 BPY2O14599 106 aa8.77□□□□□ -1.01
BRCA1-209ENST00000470026 RMI2Q96E14 147 aa8.77□□□□□ -1.01
BRCA1-209ENST00000470026 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
BRCA1-209ENST00000470026 ETDCA0A1B0GVM5 59 aa8.75□□□□□ -1.01
BRCA1-209ENST00000470026 C3orf84H3BNL1 204 aa8.75□□□□□ -1.01
BRCA1-209ENST00000470026 NDUFC1O43677 76 aa8.75□□□□□ -1.01
BRCA1-209ENST00000470026 SNURFQ9Y675 71 aa8.75□□□□□ -1.01
BRCA1-209ENST00000470026 Q8N9L7 120 aa8.74□□□□□ -1.01
BRCA1-209ENST00000470026 MRPL55Q7Z7F7 128 aaKnown RBP8.74□□□□□ -1.01
BRCA1-209ENST00000470026 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
BRCA1-209ENST00000470026 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRCA1-209ENST00000470026 Q5XG85 94 aa8.73□□□□□ -1.01
BRCA1-209ENST00000470026 SPRR4Q96PI1 79 aa8.73□□□□□ -1.01
BRCA1-209ENST00000470026 SERP1Q9Y6X1 66 aa8.73□□□□□ -1.01
BRCA1-209ENST00000470026 ST20-AS1Q8NBB2 130 aa8.72□□□□□ -1.01
BRCA1-209ENST00000470026 Q8NBF4 154 aa8.72□□□□□ -1.01
BRCA1-209ENST00000470026 C1orf137Q5JT78 98 aa8.72□□□□□ -1.01
BRCA1-209ENST00000470026 F8P00451 2351 aa8.71□□□□□ -1.01
BRCA1-209ENST00000470026 F8WEM9 126 aa8.71□□□□□ -1.01
BRCA1-209ENST00000470026 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.02
BRCA1-209ENST00000470026 C5orf47Q569G3 176 aa8.69□□□□□ -1.02
BRCA1-209ENST00000470026 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
BRCA1-209ENST00000470026 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
BRCA1-209ENST00000470026 ATP5EP56381 51 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-209ENST00000470026 REG3GQ6UW15 175 aa8.68□□□□□ -1.02
BRCA1-209ENST00000470026 FBN1P35555 2871 aaKnown RBP8.67□□□□□ -1.02
BRCA1-209ENST00000470026 K7EIL1 84 aa8.66□□□□□ -1.02
BRCA1-209ENST00000470026 HUWE1Q7Z6Z7 4374 aaKnown RBP8.66□□□□□ -1.02
BRCA1-209ENST00000470026 UBE2BP63146 152 aa8.65□□□□□ -1.02
BRCA1-209ENST00000470026 LCE6AA0A183 80 aa8.65□□□□□ -1.03
BRCA1-209ENST00000470026 STAB1Q9NY15 2570 aa8.65□□□□□ -1.03
BRCA1-209ENST00000470026 PRB2P02812 416 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-209ENST00000470026 DSCR10P59022 87 aa8.64□□□□□ -1.03
BRCA1-209ENST00000470026 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
BRCA1-209ENST00000470026 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
BRCA1-209ENST00000470026 FLNBO75369 2602 aaKnown RBP8.64□□□□□ -1.03
BRCA1-209ENST00000470026 C16orf90A8MZG2 172 aa8.63□□□□□ -1.03
BRCA1-209ENST00000470026 MAST4O15021 2626 aa8.63□□□□□ -1.03
BRCA1-209ENST00000470026 IGLV8-61A0A075B6I0 122 aa8.62□□□□□ -1.03
BRCA1-209ENST00000470026 A0A096LNI7 61 aa8.62□□□□□ -1.03
BRCA1-209ENST00000470026 LINC00476Q8WZB0 136 aa8.62□□□□□ -1.03
BRCA1-209ENST00000470026 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
BRCA1-209ENST00000470026 A0A1W2PNN7 141 aa8.6□□□□□ -1.03
BRCA1-209ENST00000470026 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
BRCA1-209ENST00000470026 IGFL1Q6UW32 110 aa8.59□□□□□ -1.03
BRCA1-209ENST00000470026 K7EQZ3 153 aa8.57□□□□□ -1.04
BRCA1-209ENST00000470026 HRCT1Q6UXD1 115 aa8.57□□□□□ -1.04
BRCA1-209ENST00000470026 FP248Q71RG6 208 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-209ENST00000470026 HIGD2AQ9BW72 106 aa8.57□□□□□ -1.04
BRCA1-209ENST00000470026 FAM30AQ9NZY2 134 aa8.56□□□□□ -1.04
BRCA1-209ENST00000470026 NOTCH1P46531 2555 aa8.56□□□□□ -1.04
BRCA1-209ENST00000470026 PRLHP81277 87 aa8.55□□□□□ -1.04
BRCA1-209ENST00000470026 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
BRCA1-209ENST00000470026 BAHCC1Q9P281 2608 aa8.54□□□□□ -1.04
BRCA1-209ENST00000470026 IGKV2-24A0A0C4DH68 120 aa8.54□□□□□ -1.04
BRCA1-209ENST00000470026 H0Y9J4 135 aa8.54□□□□□ -1.04
BRCA1-209ENST00000470026 SPRR1BP22528 89 aa8.54□□□□□ -1.04
BRCA1-209ENST00000470026 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
BRCA1-209ENST00000470026 APLNQ9ULZ1 77 aa8.53□□□□□ -1.04
BRCA1-209ENST00000470026 A0A0G2JQZ4 141 aa8.52□□□□□ -1.05
BRCA1-209ENST00000470026 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
BRCA1-209ENST00000470026 PSCAO43653 123 aa8.52□□□□□ -1.05
BRCA1-209ENST00000470026 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms