RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 COA6Q5JTJ3 125 aaKnown RBP3.84□□□□□ -1.79
PTCD3-208ENST00000469585 S100A7L2Q5SY68 101 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 LINC01545Q5VT33 79 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 BOD1L2Q8IYS8 172 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 SND1-IT1Q9HBX3 110 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 C22orf24Q9Y442 160 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 IGKV2D-26A0A0A0MRZ7 120 aa3.83□□□□□ -1.8
PTCD3-208ENST00000469585 ZNF815PA8K554 130 aa3.83□□□□□ -1.8
PTCD3-208ENST00000469585 TMEM238C9JI98 176 aa3.83□□□□□ -1.8
PTCD3-208ENST00000469585 C3orf79P0CE67 100 aa3.83□□□□□ -1.8
PTCD3-208ENST00000469585 SMIM13P0DJ93 91 aa3.83□□□□□ -1.8
PTCD3-208ENST00000469585 C9orf129Q5T035 196 aaKnown RBP3.83□□□□□ -1.8
PTCD3-208ENST00000469585 PSORS1C2Q9UIG4 136 aa3.83□□□□□ -1.8
PTCD3-208ENST00000469585 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
PTCD3-208ENST00000469585 M0R378 163 aa3.82□□□□□ -1.8
PTCD3-208ENST00000469585 MIR7-3HGQ8N6C7 128 aa3.82□□□□□ -1.8
PTCD3-208ENST00000469585 IGKV2-28A0A075B6P5 120 aa3.81□□□□□ -1.8
PTCD3-208ENST00000469585 BCE1O60756 84 aa3.81□□□□□ -1.8
PTCD3-208ENST00000469585 IGKV2D-28P01615 120 aa3.81□□□□□ -1.8
PTCD3-208ENST00000469585 IGLV7-43P04211 117 aa3.81□□□□□ -1.8
PTCD3-208ENST00000469585 PRR4Q16378 134 aa3.81□□□□□ -1.8
PTCD3-208ENST00000469585 SPANXB1Q9NS25 103 aaPredicted RBP3.81□□□□□ -1.8
PTCD3-208ENST00000469585 ETDCA0A1B0GVM5 59 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 A8MU10 97 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 NCR3O14931 201 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 TIMM17BO60830 172 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 RPL13AP40429 203 aaKnown RBP3.8□□□□□ -1.8
PTCD3-208ENST00000469585 JOSD1Q15040 202 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-208ENST00000469585 Q6ZVH6 145 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 FAM19A1Q7Z5A9 133 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 HIST3H2BBQ8N257 126 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 OR13C6PQ8NH95 151 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 LINC00167Q96N53 147 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 ZNF706Q9Y5V0 76 aaPredicted RBP3.8□□□□□ -1.8
PTCD3-208ENST00000469585 PKHD1P08F94 4074 aa3.8□□□□□ -1.8
PTCD3-208ENST00000469585 TRBV10-2A0A0K0K1G8 114 aa3.79□□□□□ -1.8
PTCD3-208ENST00000469585 ZNF861PO60384 105 aa3.79□□□□□ -1.8
PTCD3-208ENST00000469585 DDTP30046 118 aa3.79□□□□□ -1.8
PTCD3-208ENST00000469585 ATOH7Q8N100 152 aa3.79□□□□□ -1.8
PTCD3-208ENST00000469585 HIST1H2BLQ99880 126 aa3.79□□□□□ -1.8
PTCD3-208ENST00000469585 IGLV1-50A0A075B6I6 118 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 A0A0J9YXY3 114 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 H0Y9J4 135 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 SNCGO76070 127 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 NDUFC2O95298 119 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 IFITM1P13164 125 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 NPC2P61916 151 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 DAND5Q8N907 189 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 SPANXCQ9NY87 97 aa3.78□□□□□ -1.8
PTCD3-208ENST00000469585 DNAH10Q8IVF4 4471 aa3.78□□□□□ -1.81
PTCD3-208ENST00000469585 PKD1P98161 4303 aa3.77□□□□□ -1.81
PTCD3-208ENST00000469585 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
PTCD3-208ENST00000469585 TSPEAR-AS2P59090 65 aa3.77□□□□□ -1.81
PTCD3-208ENST00000469585 VAMP8Q9BV40 100 aa3.77□□□□□ -1.81
PTCD3-208ENST00000469585 HIGD2AQ9BW72 106 aa3.77□□□□□ -1.81
PTCD3-208ENST00000469585 TMEM126AQ9H061 195 aa3.77□□□□□ -1.81
PTCD3-208ENST00000469585 FAT2Q9NYQ8 4349 aa3.77□□□□□ -1.81
PTCD3-208ENST00000469585 DNAH2Q9P225 4427 aa3.76□□□□□ -1.81
PTCD3-208ENST00000469585 CRYGAP11844 174 aa3.76□□□□□ -1.81
PTCD3-208ENST00000469585 CEND1Q8N111 149 aa3.76□□□□□ -1.81
PTCD3-208ENST00000469585 SPANXDQ9BXN6 97 aa3.76□□□□□ -1.81
PTCD3-208ENST00000469585 EPPK1P58107 5090 aaKnown RBP3.76□□□□□ -1.81
PTCD3-208ENST00000469585 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 TRAV23DV6A0A075B6W5 121 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 TRAV13-2A0A0B4J235 113 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 LOC107984156A0A0G2JMH3 177 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 TRBV10-3A0A0K0K1G6 114 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 A6NDN8 102 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 VAMP3Q15836 100 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 SLC25A34Q6PIV7 304 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 ARL17AQ8IVW1 177 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 LINC00308Q8TCZ7 52 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 LINC01600Q96MT4 127 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 HIST1H4GQ99525 98 aa3.75□□□□□ -1.81
PTCD3-208ENST00000469585 SLC25A20O43772 301 aa3.74□□□□□ -1.81
PTCD3-208ENST00000469585 PRLHP81277 87 aa3.74□□□□□ -1.81
PTCD3-208ENST00000469585 LINC00337Q8N6G1 96 aa3.74□□□□□ -1.81
PTCD3-208ENST00000469585 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
PTCD3-208ENST00000469585 KCNQ1DNQ9H478 68 aa3.74□□□□□ -1.81
PTCD3-208ENST00000469585 BIRC6Q9NR09 4857 aa3.74□□□□□ -1.81
PTCD3-208ENST00000469585 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
PTCD3-208ENST00000469585 ZNF73O43830 326 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-208ENST00000469585 KRTAP10-4P60372 401 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-208ENST00000469585 SRRM2Q9UQ35 2752 aaKnown RBP3.73□□□□□ -1.81
PTCD3-208ENST00000469585 FAM229BQ4G0N7 80 aa3.72□□□□□ -1.81
PTCD3-208ENST00000469585 SPATA45Q537H7 98 aa3.72□□□□□ -1.81
PTCD3-208ENST00000469585 PCP2Q8IVA1 136 aa3.72□□□□□ -1.81
PTCD3-208ENST00000469585 RAB37Q96AX2 223 aa3.72□□□□□ -1.81
PTCD3-208ENST00000469585 FLG2Q5D862 2391 aaPredicted RBP3.71□□□□□ -1.81
PTCD3-208ENST00000469585 DMBT1Q9UGM3 2413 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-208ENST00000469585 IGLV6-57P01721 117 aa3.71□□□□□ -1.82
PTCD3-208ENST00000469585 COX8AP10176 69 aa3.71□□□□□ -1.82
PTCD3-208ENST00000469585 COX7BP24311 80 aa3.71□□□□□ -1.82
PTCD3-208ENST00000469585 Q6ZRX8 168 aa3.71□□□□□ -1.82
PTCD3-208ENST00000469585 MUSTN1Q8IVN3 82 aa3.71□□□□□ -1.82
PTCD3-208ENST00000469585 TTTY13Q9BZ97 58 aa3.71□□□□□ -1.82
PTCD3-208ENST00000469585 A0A1B0GWB2 263 aa3.7□□□□□ -1.82
PTCD3-208ENST00000469585 DLEU1O43261 78 aa3.7□□□□□ -1.82
PTCD3-208ENST00000469585 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
PTCD3-208ENST00000469585 DNAH11Q96DT5 4516 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 195.3 ms