RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 KRTAP11-1Q8IUC1 163 aa5.55□□□□□ -1.52
FN1-216ENST00000469569 SPANXB1Q9NS25 103 aaPredicted RBP5.55□□□□□ -1.52
FN1-216ENST00000469569 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
FN1-216ENST00000469569 IGKV2-28A0A075B6P5 120 aa5.54□□□□□ -1.52
FN1-216ENST00000469569 TMEM238C9JI98 176 aa5.54□□□□□ -1.52
FN1-216ENST00000469569 PRYO14603 147 aa5.54□□□□□ -1.52
FN1-216ENST00000469569 IGKV2D-28P01615 120 aa5.54□□□□□ -1.52
FN1-216ENST00000469569 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
FN1-216ENST00000469569 SCGB1D4Q6XE38 83 aa5.54□□□□□ -1.52
FN1-216ENST00000469569 TMEM126AQ9H061 195 aa5.54□□□□□ -1.52
FN1-216ENST00000469569 C5orf52A6NGY3 159 aa5.53□□□□□ -1.52
FN1-216ENST00000469569 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
FN1-216ENST00000469569 PPDPFQ9H3Y8 114 aa5.53□□□□□ -1.52
FN1-216ENST00000469569 KCNQ1DNQ9H478 68 aa5.53□□□□□ -1.52
FN1-216ENST00000469569 IFITM1P13164 125 aa5.52□□□□□ -1.53
FN1-216ENST00000469569 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
FN1-216ENST00000469569 S100A7L2Q5SY68 101 aa5.52□□□□□ -1.53
FN1-216ENST00000469569 FAM19A1Q7Z5A9 133 aa5.52□□□□□ -1.53
FN1-216ENST00000469569 LINC00337Q8N6G1 96 aa5.52□□□□□ -1.53
FN1-216ENST00000469569 SVIPQ8NHG7 77 aa5.52□□□□□ -1.53
FN1-216ENST00000469569 SPANXCQ9NY87 97 aa5.52□□□□□ -1.53
FN1-216ENST00000469569 MT1HL1P0DM35 61 aa5.51□□□□□ -1.53
FN1-216ENST00000469569 DDTP30046 118 aa5.51□□□□□ -1.53
FN1-216ENST00000469569 DAND5Q8N907 189 aa5.51□□□□□ -1.53
FN1-216ENST00000469569 LINC00308Q8TCZ7 52 aa5.51□□□□□ -1.53
FN1-216ENST00000469569 HERC1Q15751 4861 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 NCR3O14931 201 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 SCGB1D1O95968 90 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 HINT1P49773 126 aaPredicted RBP5.5□□□□□ -1.53
FN1-216ENST00000469569 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 ATOH7Q8N100 152 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 Q8NDZ9 215 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 SPANXDQ9BXN6 97 aa5.5□□□□□ -1.53
FN1-216ENST00000469569 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
FN1-216ENST00000469569 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
FN1-216ENST00000469569 IGLV6-57P01721 117 aa5.49□□□□□ -1.53
FN1-216ENST00000469569 SPRR1AP35321 89 aa5.49□□□□□ -1.53
FN1-216ENST00000469569 JOSD1Q15040 202 aaPredicted RBP5.49□□□□□ -1.53
FN1-216ENST00000469569 FAM229BQ4G0N7 80 aa5.49□□□□□ -1.53
FN1-216ENST00000469569 LITAFQ99732 161 aa5.49□□□□□ -1.53
FN1-216ENST00000469569 CRYGAP11844 174 aa5.48□□□□□ -1.53
FN1-216ENST00000469569 KRTAP1-4P0C5Y4 121 aa5.47□□□□□ -1.53
FN1-216ENST00000469569 TRAV23DV6A0A075B6W5 121 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 NPC2P61916 151 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 CTAG1AP78358 180 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 PRLHP81277 87 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 SOSTDC1Q6X4U4 206 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 PCP2Q8IVA1 136 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 OR13C6PQ8NH95 151 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 HIGD2AQ9BW72 106 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 TTTY13Q9BZ97 58 aa5.46□□□□□ -1.54
FN1-216ENST00000469569 KRTAP4-16G5E9R7 235 aaPredicted RBP5.45□□□□□ -1.54
FN1-216ENST00000469569 DLEU1O43261 78 aa5.45□□□□□ -1.54
FN1-216ENST00000469569 ZNF73O43830 326 aaPredicted RBP5.45□□□□□ -1.54
FN1-216ENST00000469569 PRR26Q8N8Z3 221 aa5.45□□□□□ -1.54
FN1-216ENST00000469569 TNXBP22105 4242 aa5.44□□□□□ -1.54
FN1-216ENST00000469569 TRAV13-2A0A0B4J235 113 aa5.44□□□□□ -1.54
FN1-216ENST00000469569 Q6ZRX8 168 aa5.44□□□□□ -1.54
FN1-216ENST00000469569 TRBV7-6A0A0J9YX20 115 aa5.43□□□□□ -1.54
FN1-216ENST00000469569 COX8AP10176 69 aa5.43□□□□□ -1.54
FN1-216ENST00000469569 TYMSOSQ8TAI1 123 aa5.43□□□□□ -1.54
FN1-216ENST00000469569 DHRS4-AS1Q9P1J3 65 aa5.43□□□□□ -1.54
FN1-216ENST00000469569 MUSTN1Q8IVN3 82 aa5.42□□□□□ -1.54
FN1-216ENST00000469569 SMCR5Q8TEV8 140 aa5.42□□□□□ -1.54
FN1-216ENST00000469569 VAMP8Q9BV40 100 aa5.42□□□□□ -1.54
FN1-216ENST00000469569 A4D1N5 150 aa5.41□□□□□ -1.54
FN1-216ENST00000469569 A6NDN8 102 aa5.41□□□□□ -1.54
FN1-216ENST00000469569 SPRR4Q96PI1 79 aa5.41□□□□□ -1.54
FN1-216ENST00000469569 VAMP3Q15836 100 aa5.4□□□□□ -1.54
FN1-216ENST00000469569 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
FN1-216ENST00000469569 SLC25A34Q6PIV7 304 aa5.4□□□□□ -1.54
FN1-216ENST00000469569 HIST1H4GQ99525 98 aa5.4□□□□□ -1.54
FN1-216ENST00000469569 HIGD1BQ9P298 99 aa5.4□□□□□ -1.54
FN1-216ENST00000469569 A0A087X002 238 aa5.39□□□□□ -1.55
FN1-216ENST00000469569 A0A1B0GWB2 263 aa5.39□□□□□ -1.55
FN1-216ENST00000469569 SPATA45Q537H7 98 aa5.39□□□□□ -1.55
FN1-216ENST00000469569 LINC00483Q53H64 154 aa5.39□□□□□ -1.55
FN1-216ENST00000469569 NHP2Q9NX24 153 aaKnown RBP5.39□□□□□ -1.55
FN1-216ENST00000469569 COX7BP24311 80 aa5.38□□□□□ -1.55
FN1-216ENST00000469569 ELOF1P60002 83 aaKnown RBP5.38□□□□□ -1.55
FN1-216ENST00000469569 Q9BRP9 147 aa5.38□□□□□ -1.55
FN1-216ENST00000469569 PAM16Q9Y3D7 125 aa5.38□□□□□ -1.55
FN1-216ENST00000469569 TAL2Q16559 108 aa5.37□□□□□ -1.55
FN1-216ENST00000469569 C6orf99Q4VX62 202 aa5.37□□□□□ -1.55
FN1-216ENST00000469569 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
FN1-216ENST00000469569 SLC25A20O43772 301 aa5.36□□□□□ -1.55
FN1-216ENST00000469569 GAGE2AQ6NT46 116 aa5.36□□□□□ -1.55
FN1-216ENST00000469569 SSBP3-AS1Q7Z2R9 100 aa5.36□□□□□ -1.55
FN1-216ENST00000469569 C14orf144Q96I85 54 aa5.36□□□□□ -1.55
FN1-216ENST00000469569 ANAPC11Q9NYG5 84 aa5.36□□□□□ -1.55
FN1-216ENST00000469569 SNCGO76070 127 aa5.35□□□□□ -1.55
FN1-216ENST00000469569 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
FN1-216ENST00000469569 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
FN1-216ENST00000469569 PYY3Q5JQD4 70 aa5.34□□□□□ -1.55
FN1-216ENST00000469569 SPRR1BP22528 89 aa5.33□□□□□ -1.56
FN1-216ENST00000469569 BVES-AS1Q5T3Y7 98 aa5.33□□□□□ -1.56
FN1-216ENST00000469569 SMIM11BQ8TCY0 68 aa5.33□□□□□ -1.56
FN1-216ENST00000469569 LAMTOR3Q9UHA4 124 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms