RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 Q6ZRP5 223 aa10.18□□□□□ -0.78
LIMS2-213ENST00000469300 ELOF1P60002 83 aaKnown RBP10.18□□□□□ -0.78
LIMS2-213ENST00000469300 HCG22E2RYF7 251 aa10.17□□□□□ -0.78
LIMS2-213ENST00000469300 PCOTHQ58A44 107 aa10.17□□□□□ -0.78
LIMS2-213ENST00000469300 TM2D3Q9BRN9 247 aa10.17□□□□□ -0.78
LIMS2-213ENST00000469300 ADGRG4Q8IZF6 3080 aa10.17□□□□□ -0.78
LIMS2-213ENST00000469300 FAM229AH3BQW9 127 aa10.16□□□□□ -0.78
LIMS2-213ENST00000469300 KIAA0087Q14695 138 aa10.16□□□□□ -0.78
LIMS2-213ENST00000469300 Q6ZRX8 168 aa10.15□□□□□ -0.78
LIMS2-213ENST00000469300 PRR34Q9NV39 138 aa10.15□□□□□ -0.79
LIMS2-213ENST00000469300 CD164Q04900 197 aa10.13□□□□□ -0.79
LIMS2-213ENST00000469300 KALRNO60229 2985 aa10.13□□□□□ -0.79
LIMS2-213ENST00000469300 LINC00336Q6ZUF6 198 aa10.12□□□□□ -0.79
LIMS2-213ENST00000469300 REV3LO60673 3130 aa10.12□□□□□ -0.79
LIMS2-213ENST00000469300 PHF5AQ7RTV0 110 aaKnown RBP10.11□□□□□ -0.79
LIMS2-213ENST00000469300 C1orf64Q8NEQ6 169 aa10.11□□□□□ -0.79
LIMS2-213ENST00000469300 SMIM29Q86T20 159 aa10.11□□□□□ -0.79
LIMS2-213ENST00000469300 CFAP47Q6ZTR5 3102 aa10.11□□□□□ -0.79
LIMS2-213ENST00000469300 MYO15AQ9UKN7 3530 aa10.11□□□□□ -0.79
LIMS2-213ENST00000469300 FAM218AQ96MZ4 157 aa10.1□□□□□ -0.79
LIMS2-213ENST00000469300 ATMQ13315 3056 aa10.1□□□□□ -0.79
LIMS2-213ENST00000469300 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
LIMS2-213ENST00000469300 MOBPQ13875 183 aa10.08□□□□□ -0.8
LIMS2-213ENST00000469300 Q8NBF4 154 aa10.08□□□□□ -0.8
LIMS2-213ENST00000469300 EPM2AB3EWF7 344 aa10.07□□□□□ -0.8
LIMS2-213ENST00000469300 WIPF1O43516 503 aa10.05□□□□□ -0.8
LIMS2-213ENST00000469300 C8orf87E5RJ46 101 aa10.05□□□□□ -0.8
LIMS2-213ENST00000469300 IGLV6-57P01721 117 aa10.05□□□□□ -0.8
LIMS2-213ENST00000469300 LITAFQ99732 161 aa10.05□□□□□ -0.8
LIMS2-213ENST00000469300 TEP1Q99973 2627 aaKnown RBP10.04□□□□□ -0.8
LIMS2-213ENST00000469300 SPTBN5Q9NRC6 3674 aaKnown RBP10.04□□□□□ -0.8
LIMS2-213ENST00000469300 H3BPC8 53 aa10.04□□□□□ -0.8
LIMS2-213ENST00000469300 ERC2-IT1O76042 136 aa10.04□□□□□ -0.8
LIMS2-213ENST00000469300 Q6ZQT0 140 aa10.04□□□□□ -0.8
LIMS2-213ENST00000469300 LOC110117498A0A087WWA1 95 aa10.03□□□□□ -0.8
LIMS2-213ENST00000469300 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
LIMS2-213ENST00000469300 DMXL2Q8TDJ6 3036 aa10.03□□□□□ -0.8
LIMS2-213ENST00000469300 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
LIMS2-213ENST00000469300 DEFB116Q30KQ4 102 aa10.02□□□□□ -0.81
LIMS2-213ENST00000469300 CYP4F30PQ9H0H9 118 aa10.02□□□□□ -0.81
LIMS2-213ENST00000469300 CHTF8P0CG12 524 aa10.02□□□□□ -0.81
LIMS2-213ENST00000469300 KLKP1Q107X0 134 aa10.02□□□□□ -0.81
LIMS2-213ENST00000469300 LINC00476Q8WZB0 136 aa10.01□□□□□ -0.81
LIMS2-213ENST00000469300 ZZEF1O43149 2961 aa10.01□□□□□ -0.81
LIMS2-213ENST00000469300 A0A1B0GU69 56 aa10.01□□□□□ -0.81
LIMS2-213ENST00000469300 TP53AIP1Q9HCN2 124 aa10.01□□□□□ -0.81
LIMS2-213ENST00000469300 SPACA4Q8TDM5 124 aa10□□□□□ -0.81
LIMS2-213ENST00000469300 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
LIMS2-213ENST00000469300 TYMSOSQ8TAI1 123 aa10□□□□□ -0.81
LIMS2-213ENST00000469300 A8MUN3 132 aa9.99□□□□□ -0.81
LIMS2-213ENST00000469300 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
LIMS2-213ENST00000469300 C15orf56Q8N910 161 aa9.99□□□□□ -0.81
LIMS2-213ENST00000469300 C9orf163Q8N9P6 203 aa9.98□□□□□ -0.81
LIMS2-213ENST00000469300 IGLV1-50A0A075B6I6 118 aa9.98□□□□□ -0.81
LIMS2-213ENST00000469300 TACC2O95359 2948 aa9.98□□□□□ -0.81
LIMS2-213ENST00000469300 A0A087WTM6 91 aa9.97□□□□□ -0.81
LIMS2-213ENST00000469300 COL12A1Q99715 3063 aa9.97□□□□□ -0.81
LIMS2-213ENST00000469300 APLNQ9ULZ1 77 aa9.97□□□□□ -0.81
LIMS2-213ENST00000469300 ZNF575Q86XF7 245 aa9.96□□□□□ -0.81
LIMS2-213ENST00000469300 PLA2G2DQ9UNK4 145 aa9.96□□□□□ -0.82
LIMS2-213ENST00000469300 FLNCQ14315 2725 aa9.95□□□□□ -0.82
LIMS2-213ENST00000469300 RPL37AP61513 92 aaKnown RBP9.95□□□□□ -0.82
LIMS2-213ENST00000469300 TRBV7-4A0A0J9YYF1 115 aa9.95□□□□□ -0.82
LIMS2-213ENST00000469300 GCN1Q92616 2671 aaKnown RBP9.94□□□□□ -0.82
LIMS2-213ENST00000469300 ATP11AUNQ6ZP68 121 aa9.94□□□□□ -0.82
LIMS2-213ENST00000469300 TEX15Q9BXT5 2789 aa9.94□□□□□ -0.82
LIMS2-213ENST00000469300 LRBAP50851 2863 aa9.94□□□□□ -0.82
LIMS2-213ENST00000469300 ST20-AS1Q8NBB2 130 aa9.94□□□□□ -0.82
LIMS2-213ENST00000469300 H7BZZ5 65 aa9.93□□□□□ -0.82
LIMS2-213ENST00000469300 ACYP2P14621 99 aa9.93□□□□□ -0.82
LIMS2-213ENST00000469300 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
LIMS2-213ENST00000469300 KTN1-AS1Q86SY8 53 aa9.92□□□□□ -0.82
LIMS2-213ENST00000469300 LOC400499M0QZD8 3231 aa9.92□□□□□ -0.82
LIMS2-213ENST00000469300 SPINK1P00995 79 aa9.92□□□□□ -0.82
LIMS2-213ENST00000469300 FAM168BA1KXE4 195 aa9.91□□□□□ -0.82
LIMS2-213ENST00000469300 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
LIMS2-213ENST00000469300 RETNLBQ9BQ08 111 aa9.91□□□□□ -0.82
LIMS2-213ENST00000469300 CNBPP62633 177 aaKnown RBP9.9□□□□□ -0.82
LIMS2-213ENST00000469300 IGSF10Q6WRI0 2623 aa9.9□□□□□ -0.83
LIMS2-213ENST00000469300 SSBP3-AS1Q7Z2R9 100 aa9.89□□□□□ -0.83
LIMS2-213ENST00000469300 TRAV22A0A0B4J277 110 aa9.88□□□□□ -0.83
LIMS2-213ENST00000469300 ZNF861PO60384 105 aa9.88□□□□□ -0.83
LIMS2-213ENST00000469300 C7orf65Q6ZTY9 151 aa9.87□□□□□ -0.83
LIMS2-213ENST00000469300 LCA10Q71F78 164 aa9.87□□□□□ -0.83
LIMS2-213ENST00000469300 LINC00313P59037 77 aa9.86□□□□□ -0.83
LIMS2-213ENST00000469300 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
LIMS2-213ENST00000469300 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
LIMS2-213ENST00000469300 ITPR1Q14643 2758 aa9.86□□□□□ -0.83
LIMS2-213ENST00000469300 UBR5O95071 2799 aaPredicted RBP9.85□□□□□ -0.83
LIMS2-213ENST00000469300 LOC101927531A0A1B0GV80 90 aa9.85□□□□□ -0.83
LIMS2-213ENST00000469300 C9orf129Q5T035 196 aaKnown RBP9.85□□□□□ -0.83
LIMS2-213ENST00000469300 NOTCH1P46531 2555 aa9.84□□□□□ -0.83
LIMS2-213ENST00000469300 USP34Q70CQ2 3546 aa9.84□□□□□ -0.83
LIMS2-213ENST00000469300 DMXL1Q9Y485 3027 aa9.83□□□□□ -0.84
LIMS2-213ENST00000469300 CR1P17927 2039 aa9.82□□□□□ -0.84
LIMS2-213ENST00000469300 UNC79Q9P2D8 2635 aa9.81□□□□□ -0.84
LIMS2-213ENST00000469300 COA5Q86WW8 74 aa9.8□□□□□ -0.84
LIMS2-213ENST00000469300 A8MWP4 228 aa9.79□□□□□ -0.84
LIMS2-213ENST00000469300 PRR15Q8IV56 129 aa9.79□□□□□ -0.84
LIMS2-213ENST00000469300 J3QL48 77 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms