RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 S100A7L2Q5SY68 101 aa7.25□□□□□ -1.25
VPS13D-204ENST00000469054 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
VPS13D-204ENST00000469054 H0Y9J4 135 aa7.24□□□□□ -1.25
VPS13D-204ENST00000469054 IGLV6-57P01721 117 aa7.24□□□□□ -1.25
VPS13D-204ENST00000469054 S100A12P80511 92 aa7.24□□□□□ -1.25
VPS13D-204ENST00000469054 FAM19A1Q7Z5A9 133 aa7.24□□□□□ -1.25
VPS13D-204ENST00000469054 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
VPS13D-204ENST00000469054 MUSTN1Q8IVN3 82 aa7.24□□□□□ -1.25
VPS13D-204ENST00000469054 C14orf144Q96I85 54 aa7.24□□□□□ -1.25
VPS13D-204ENST00000469054 SPRR1AP35321 89 aa7.23□□□□□ -1.25
VPS13D-204ENST00000469054 XP32Q5T750 250 aa7.23□□□□□ -1.25
VPS13D-204ENST00000469054 LINC00518Q8N0U6 118 aa7.23□□□□□ -1.25
VPS13D-204ENST00000469054 PRLHP81277 87 aa7.22□□□□□ -1.25
VPS13D-204ENST00000469054 LINC01600Q96MT4 127 aa7.22□□□□□ -1.25
VPS13D-204ENST00000469054 LINC00337Q8N6G1 96 aa7.21□□□□□ -1.26
VPS13D-204ENST00000469054 OR13C6PQ8NH95 151 aa7.21□□□□□ -1.26
VPS13D-204ENST00000469054 KRTAP4-16G5E9R7 235 aaPredicted RBP7.2□□□□□ -1.26
VPS13D-204ENST00000469054 SLC25A34Q6PIV7 304 aa7.2□□□□□ -1.26
VPS13D-204ENST00000469054 CBY1Q9Y3M2 126 aa7.2□□□□□ -1.26
VPS13D-204ENST00000469054 TRAV23DV6A0A075B6W5 121 aa7.19□□□□□ -1.26
VPS13D-204ENST00000469054 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
VPS13D-204ENST00000469054 KRTAP1-4P0C5Y4 121 aa7.18□□□□□ -1.26
VPS13D-204ENST00000469054 HIST1H4GQ99525 98 aa7.18□□□□□ -1.26
VPS13D-204ENST00000469054 HIGD1BQ9P298 99 aa7.18□□□□□ -1.26
VPS13D-204ENST00000469054 B5MCH6 92 aa7.17□□□□□ -1.26
VPS13D-204ENST00000469054 ZNF73O43830 326 aaPredicted RBP7.17□□□□□ -1.26
VPS13D-204ENST00000469054 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
VPS13D-204ENST00000469054 HIGD2AQ9BW72 106 aa7.17□□□□□ -1.26
VPS13D-204ENST00000469054 A4D1N5 150 aa7.16□□□□□ -1.26
VPS13D-204ENST00000469054 A6NDN8 102 aa7.16□□□□□ -1.26
VPS13D-204ENST00000469054 C2orf91Q6ZV80 131 aa7.16□□□□□ -1.26
VPS13D-204ENST00000469054 TNXBP22105 4242 aa7.16□□□□□ -1.26
VPS13D-204ENST00000469054 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
VPS13D-204ENST00000469054 HINT1P49773 126 aaPredicted RBP7.15□□□□□ -1.26
VPS13D-204ENST00000469054 KRTAP10-8P60410 259 aa7.15□□□□□ -1.26
VPS13D-204ENST00000469054 Q6ZRX8 168 aa7.14□□□□□ -1.27
VPS13D-204ENST00000469054 PRR26Q8N8Z3 221 aa7.14□□□□□ -1.27
VPS13D-204ENST00000469054 SMCR5Q8TEV8 140 aa7.14□□□□□ -1.27
VPS13D-204ENST00000469054 TAL2Q16559 108 aa7.12□□□□□ -1.27
VPS13D-204ENST00000469054 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
VPS13D-204ENST00000469054 Q9BRP9 147 aa7.12□□□□□ -1.27
VPS13D-204ENST00000469054 DMBT1Q9UGM3 2413 aaPredicted RBP7.11□□□□□ -1.27
VPS13D-204ENST00000469054 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
VPS13D-204ENST00000469054 UQCR10Q9UDW1 63 aa7.11□□□□□ -1.27
VPS13D-204ENST00000469054 ERC2-IT1O76042 136 aa7.1□□□□□ -1.27
VPS13D-204ENST00000469054 CRYGAP11844 174 aa7.1□□□□□ -1.27
VPS13D-204ENST00000469054 RPL13AP40429 203 aaKnown RBP7.1□□□□□ -1.27
VPS13D-204ENST00000469054 CEND1Q8N111 149 aa7.1□□□□□ -1.27
VPS13D-204ENST00000469054 SMIM11BQ8TCY0 68 aa7.1□□□□□ -1.27
VPS13D-204ENST00000469054 SPRR4Q96PI1 79 aa7.1□□□□□ -1.27
VPS13D-204ENST00000469054 C12orf57Q99622 126 aa7.1□□□□□ -1.27
VPS13D-204ENST00000469054 ZNF706Q9Y5V0 76 aaPredicted RBP7.1□□□□□ -1.27
VPS13D-204ENST00000469054 A0A087X002 238 aa7.09□□□□□ -1.27
VPS13D-204ENST00000469054 TRBV7-6A0A0J9YX20 115 aa7.09□□□□□ -1.27
VPS13D-204ENST00000469054 LOC105371267A0A1B0GV96 52 aa7.09□□□□□ -1.27
VPS13D-204ENST00000469054 SMIM6P0DI80 62 aa7.09□□□□□ -1.27
VPS13D-204ENST00000469054 COX7BP24311 80 aa7.09□□□□□ -1.27
VPS13D-204ENST00000469054 ELOF1P60002 83 aaKnown RBP7.09□□□□□ -1.27
VPS13D-204ENST00000469054 FAM229BQ4G0N7 80 aa7.09□□□□□ -1.27
VPS13D-204ENST00000469054 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
VPS13D-204ENST00000469054 CFC1P0CG37 223 aa7.08□□□□□ -1.28
VPS13D-204ENST00000469054 A0A1B0GWB2 263 aa7.07□□□□□ -1.28
VPS13D-204ENST00000469054 HSD52Q0P140 79 aa7.07□□□□□ -1.28
VPS13D-204ENST00000469054 DHRS4-AS1Q9P1J3 65 aa7.07□□□□□ -1.28
VPS13D-204ENST00000469054 HERC1Q15751 4861 aa7.07□□□□□ -1.28
VPS13D-204ENST00000469054 A0A0B4J2C4 111 aa7.06□□□□□ -1.28
VPS13D-204ENST00000469054 FXYD2P54710 66 aa7.06□□□□□ -1.28
VPS13D-204ENST00000469054 GAGE2AQ6NT46 116 aa7.06□□□□□ -1.28
VPS13D-204ENST00000469054 RAB37Q96AX2 223 aa7.06□□□□□ -1.28
VPS13D-204ENST00000469054 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
VPS13D-204ENST00000469054 LINC00483Q53H64 154 aa7.05□□□□□ -1.28
VPS13D-204ENST00000469054 TYMSOSQ8TAI1 123 aa7.05□□□□□ -1.28
VPS13D-204ENST00000469054 PRO1933Q9H354 126 aa7.05□□□□□ -1.28
VPS13D-204ENST00000469054 VAMP3Q15836 100 aa7.04□□□□□ -1.28
VPS13D-204ENST00000469054 ST20-AS1Q8NBB2 130 aa7.03□□□□□ -1.28
VPS13D-204ENST00000469054 H7C2G1 150 aa7.02□□□□□ -1.29
VPS13D-204ENST00000469054 C3orf22Q8N5N4 141 aa7.02□□□□□ -1.29
VPS13D-204ENST00000469054 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
VPS13D-204ENST00000469054 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
VPS13D-204ENST00000469054 SLC25A20O43772 301 aa7□□□□□ -1.29
VPS13D-204ENST00000469054 BVES-AS1Q5T3Y7 98 aa7□□□□□ -1.29
VPS13D-204ENST00000469054 LINC00575Q6W349 94 aa7□□□□□ -1.29
VPS13D-204ENST00000469054 SPRR1BP22528 89 aa6.99□□□□□ -1.29
VPS13D-204ENST00000469054 Q1RN00 199 aa6.98□□□□□ -1.29
VPS13D-204ENST00000469054 hADV29S1A0JD25 119 aa6.97□□□□□ -1.29
VPS13D-204ENST00000469054 TSTD3H0UI37 97 aa6.97□□□□□ -1.29
VPS13D-204ENST00000469054 CTAG1AP78358 180 aa6.97□□□□□ -1.29
VPS13D-204ENST00000469054 DEFB105AQ8NG35 78 aa6.97□□□□□ -1.29
VPS13D-204ENST00000469054 IGLV5-48A0A075B6I7 105 aa6.96□□□□□ -1.3
VPS13D-204ENST00000469054 IGLV9-49A0A0B4J1Y8 123 aa6.96□□□□□ -1.3
VPS13D-204ENST00000469054 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.3
VPS13D-204ENST00000469054 K7ERJ3 54 aa6.96□□□□□ -1.3
VPS13D-204ENST00000469054 LINC00304Q8N9R0 145 aa6.96□□□□□ -1.3
VPS13D-204ENST00000469054 H0YGX0 51 aa6.95□□□□□ -1.3
VPS13D-204ENST00000469054 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
VPS13D-204ENST00000469054 MOBPQ13875 183 aa6.95□□□□□ -1.3
VPS13D-204ENST00000469054 SSBP3-AS1Q7Z2R9 100 aa6.95□□□□□ -1.3
VPS13D-204ENST00000469054 LAMTOR3Q9UHA4 124 aa6.95□□□□□ -1.3
VPS13D-204ENST00000469054 M0R143 59 aa6.94□□□□□ -1.3
VPS13D-204ENST00000469054 TSPAN13O95857 204 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms