RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 MIEN1Q9BRT3 115 aa8.28□□□□□ -1.08
SDCCAG3-209ENST00000468963 A0A0J9YXY3 114 aa8.27□□□□□ -1.09
SDCCAG3-209ENST00000468963 TRAV23DV6A0A075B6W5 121 aa8.26□□□□□ -1.09
SDCCAG3-209ENST00000468963 KRTAP4-1Q9BYQ7 146 aa8.26□□□□□ -1.09
SDCCAG3-209ENST00000468963 E9PLD3 99 aa8.25□□□□□ -1.09
SDCCAG3-209ENST00000468963 JOSD1Q15040 202 aaPredicted RBP8.25□□□□□ -1.09
SDCCAG3-209ENST00000468963 SLC25A20O43772 301 aa8.24□□□□□ -1.09
SDCCAG3-209ENST00000468963 ZNF73O43830 326 aaPredicted RBP8.24□□□□□ -1.09
SDCCAG3-209ENST00000468963 NPC2P61916 151 aa8.24□□□□□ -1.09
SDCCAG3-209ENST00000468963 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
SDCCAG3-209ENST00000468963 ST20-AS1Q8NBB2 130 aa8.23□□□□□ -1.09
SDCCAG3-209ENST00000468963 C5orf52A6NGY3 159 aa8.22□□□□□ -1.09
SDCCAG3-209ENST00000468963 SEC61BP60468 96 aaKnown RBP8.22□□□□□ -1.09
SDCCAG3-209ENST00000468963 LITAFQ99732 161 aa8.22□□□□□ -1.09
SDCCAG3-209ENST00000468963 SYS1-DBNDD2H3BUS1 97 aa8.2□□□□□ -1.1
SDCCAG3-209ENST00000468963 LINC00308Q8TCZ7 52 aa8.2□□□□□ -1.1
SDCCAG3-209ENST00000468963 SPRR1BP22528 89 aa8.19□□□□□ -1.1
SDCCAG3-209ENST00000468963 XP32Q5T750 250 aa8.19□□□□□ -1.1
SDCCAG3-209ENST00000468963 C9orf153Q5TBE3 101 aa8.19□□□□□ -1.1
SDCCAG3-209ENST00000468963 CBY1Q9Y3M2 126 aa8.19□□□□□ -1.1
SDCCAG3-209ENST00000468963 TIMM17BO60830 172 aa8.18□□□□□ -1.1
SDCCAG3-209ENST00000468963 HINT1P49773 126 aaPredicted RBP8.18□□□□□ -1.1
SDCCAG3-209ENST00000468963 SPANXCQ9NY87 97 aa8.18□□□□□ -1.1
SDCCAG3-209ENST00000468963 LINC01545Q5VT33 79 aa8.17□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 OR13C6PQ8NH95 151 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
SDCCAG3-209ENST00000468963 PET117Q6UWS5 81 aa8.15□□□□□ -1.1
SDCCAG3-209ENST00000468963 DHRS4-AS1Q9P1J3 65 aa8.15□□□□□ -1.1
SDCCAG3-209ENST00000468963 LINC01547P58512 204 aaPredicted RBP8.14□□□□□ -1.11
SDCCAG3-209ENST00000468963 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
SDCCAG3-209ENST00000468963 TTTY13Q9BZ97 58 aa8.13□□□□□ -1.11
SDCCAG3-209ENST00000468963 KRTAP9-6A0A140TA67 174 aa8.12□□□□□ -1.11
SDCCAG3-209ENST00000468963 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
SDCCAG3-209ENST00000468963 SLC25A34Q6PIV7 304 aa8.12□□□□□ -1.11
SDCCAG3-209ENST00000468963 LINC00518Q8N0U6 118 aa8.12□□□□□ -1.11
SDCCAG3-209ENST00000468963 ELOF1P60002 83 aaKnown RBP8.11□□□□□ -1.11
SDCCAG3-209ENST00000468963 LAMTOR3Q9UHA4 124 aa8.11□□□□□ -1.11
SDCCAG3-209ENST00000468963 C3orf79P0CE67 100 aa8.1□□□□□ -1.11
SDCCAG3-209ENST00000468963 COX7BP24311 80 aa8.1□□□□□ -1.11
SDCCAG3-209ENST00000468963 C6orf99Q4VX62 202 aa8.1□□□□□ -1.11
SDCCAG3-209ENST00000468963 HRCT1Q6UXD1 115 aa8.1□□□□□ -1.11
SDCCAG3-209ENST00000468963 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
SDCCAG3-209ENST00000468963 LIMD2Q9BT23 127 aa8.08□□□□□ -1.12
SDCCAG3-209ENST00000468963 TRBV7-6A0A0J9YX20 115 aa8.07□□□□□ -1.12
SDCCAG3-209ENST00000468963 TAL2Q16559 108 aa8.07□□□□□ -1.12
SDCCAG3-209ENST00000468963 CD164Q04900 197 aa8.06□□□□□ -1.12
SDCCAG3-209ENST00000468963 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
SDCCAG3-209ENST00000468963 DEFB105AQ8NG35 78 aa8.06□□□□□ -1.12
SDCCAG3-209ENST00000468963 TEX49A0A1B0GTD5 131 aa8.05□□□□□ -1.12
SDCCAG3-209ENST00000468963 KRTAP19-2Q3LHN2 52 aa8.05□□□□□ -1.12
SDCCAG3-209ENST00000468963 LCE2DQ5TA82 110 aaPredicted RBP8.05□□□□□ -1.12
SDCCAG3-209ENST00000468963 SMIM29Q86T20 159 aa8.05□□□□□ -1.12
SDCCAG3-209ENST00000468963 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
SDCCAG3-209ENST00000468963 Q1RN00 199 aa8.04□□□□□ -1.12
SDCCAG3-209ENST00000468963 ANKRD39Q53RE8 183 aa8.04□□□□□ -1.12
SDCCAG3-209ENST00000468963 C9orf92A6NGG3 77 aa8.03□□□□□ -1.12
SDCCAG3-209ENST00000468963 IFITM1P13164 125 aa8.03□□□□□ -1.12
SDCCAG3-209ENST00000468963 KRTDAPP60985 99 aa8.03□□□□□ -1.12
SDCCAG3-209ENST00000468963 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
SDCCAG3-209ENST00000468963 Q5XG85 94 aa8.03□□□□□ -1.12
SDCCAG3-209ENST00000468963 A0A1B0GWB2 263 aa8.02□□□□□ -1.13
SDCCAG3-209ENST00000468963 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
SDCCAG3-209ENST00000468963 IGLV5-48A0A075B6I7 105 aa8.01□□□□□ -1.13
SDCCAG3-209ENST00000468963 AKR1D1P51857 326 aa8.01□□□□□ -1.13
SDCCAG3-209ENST00000468963 Q6ZVH6 145 aa8.01□□□□□ -1.13
SDCCAG3-209ENST00000468963 MUSTN1Q8IVN3 82 aa8.01□□□□□ -1.13
SDCCAG3-209ENST00000468963 H7C2G1 150 aa8□□□□□ -1.13
SDCCAG3-209ENST00000468963 COPS9Q8WXC6 57 aa8□□□□□ -1.13
SDCCAG3-209ENST00000468963 IGLV8-61A0A075B6I0 122 aa7.99□□□□□ -1.13
SDCCAG3-209ENST00000468963 A6NDN8 102 aa7.99□□□□□ -1.13
SDCCAG3-209ENST00000468963 C1orf195Q5TG92 126 aa7.99□□□□□ -1.13
SDCCAG3-209ENST00000468963 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
SDCCAG3-209ENST00000468963 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
SDCCAG3-209ENST00000468963 C20orf202A1L168 122 aa7.97□□□□□ -1.13
SDCCAG3-209ENST00000468963 A4D1N5 150 aa7.97□□□□□ -1.13
SDCCAG3-209ENST00000468963 ATOH7Q8N100 152 aa7.97□□□□□ -1.13
SDCCAG3-209ENST00000468963 FSIP2Q5CZC0 6907 aa7.97□□□□□ -1.13
SDCCAG3-209ENST00000468963 MT1HP80294 61 aa7.96□□□□□ -1.14
SDCCAG3-209ENST00000468963 SMIM11BQ8TCY0 68 aa7.95□□□□□ -1.14
SDCCAG3-209ENST00000468963 TRAV13-2A0A0B4J235 113 aa7.94□□□□□ -1.14
SDCCAG3-209ENST00000468963 FLGP20930 4061 aaPredicted RBP7.92□□□□□ -1.14
SDCCAG3-209ENST00000468963 NHP2Q9NX24 153 aaKnown RBP7.92□□□□□ -1.14
SDCCAG3-209ENST00000468963 SNRPEP62304 92 aaKnown RBP7.91□□□□□ -1.14
SDCCAG3-209ENST00000468963 RPL37P61927 97 aaKnown RBP7.9□□□□□ -1.14
SDCCAG3-209ENST00000468963 LINC00575Q6W349 94 aa7.88□□□□□ -1.15
SDCCAG3-209ENST00000468963 TCL1BO95988 128 aa7.87□□□□□ -1.15
SDCCAG3-209ENST00000468963 VAMP3Q15836 100 aa7.87□□□□□ -1.15
SDCCAG3-209ENST00000468963 CRCT1Q9UGL9 99 aa7.87□□□□□ -1.15
SDCCAG3-209ENST00000468963 CFC1BP0CG36 223 aa7.86□□□□□ -1.15
SDCCAG3-209ENST00000468963 LORP23490 312 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms