RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TSKUQ8WUA8 353 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 COPS9Q8WXC6 57 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 LINC00526Q96FQ7 95 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 MRPL35Q9NZE8 188 aaKnown RBP1.32□□□□□ -2.2
LSM5-209ENST00000468872 IER3IP1Q9Y5U9 82 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 C20orf202A1L168 122 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 OOSP1A8MZH6 123 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 SMIM6P0DI80 62 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 TPPP2P59282 170 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 UBE2G1P62253 170 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 INSL4Q14641 139 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 SPATA45Q537H7 98 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 C9orf116Q5BN46 136 aaPredicted RBP1.31□□□□□ -2.2
LSM5-209ENST00000468872 IFI27L1Q96BM0 104 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 RPRMQ9NS64 109 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 LINC00846Q9NV44 126 aa1.31□□□□□ -2.2
LSM5-209ENST00000468872 LOC101927531A0A1B0GV80 90 aa1.3□□□□□ -2.2
LSM5-209ENST00000468872 CCKP06307 115 aa1.3□□□□□ -2.2
LSM5-209ENST00000468872 PIPP12273 146 aaPredicted RBP1.3□□□□□ -2.2
LSM5-209ENST00000468872 FXYD4P59646 89 aa1.3□□□□□ -2.2
LSM5-209ENST00000468872 S100A7L2Q5SY68 101 aa1.3□□□□□ -2.2
LSM5-209ENST00000468872 C10orf82Q8WW14 230 aa1.3□□□□□ -2.2
LSM5-209ENST00000468872 DSCR8Q96T75 97 aa1.3□□□□□ -2.2
LSM5-209ENST00000468872 AMELYQ99218 206 aa1.3□□□□□ -2.2
LSM5-209ENST00000468872 SNCGO76070 127 aa1.29□□□□□ -2.2
LSM5-209ENST00000468872 SPRR2DP22532 72 aa1.29□□□□□ -2.2
LSM5-209ENST00000468872 MRPL54Q6P161 138 aaKnown RBP1.29□□□□□ -2.2
LSM5-209ENST00000468872 PPP3R2Q96LZ3 170 aa1.29□□□□□ -2.2
LSM5-209ENST00000468872 FLGP20930 4061 aaPredicted RBP1.29□□□□□ -2.2
LSM5-209ENST00000468872 TRAV12-3A0A0B4J271 114 aa1.28□□□□□ -2.2
LSM5-209ENST00000468872 HIGD1CA8MV81 97 aa1.28□□□□□ -2.2
LSM5-209ENST00000468872 APOC4-APOC2K7ER74 178 aa1.28□□□□□ -2.2
LSM5-209ENST00000468872 APOC2P02655 101 aa1.28□□□□□ -2.2
LSM5-209ENST00000468872 FXYD3Q14802 87 aa1.28□□□□□ -2.2
LSM5-209ENST00000468872 C9orf153Q5TBE3 101 aa1.28□□□□□ -2.2
LSM5-209ENST00000468872 COX14Q96I36 57 aa1.28□□□□□ -2.2
LSM5-209ENST00000468872 H3BSH0 61 aa1.27□□□□□ -2.21
LSM5-209ENST00000468872 CBLN1P23435 193 aa1.27□□□□□ -2.21
LSM5-209ENST00000468872 HSD52Q0P140 79 aa1.27□□□□□ -2.21
LSM5-209ENST00000468872 C12orf73Q69YU5 71 aa1.27□□□□□ -2.21
LSM5-209ENST00000468872 C10orf99Q6UWK7 81 aa1.27□□□□□ -2.21
LSM5-209ENST00000468872 C5orf56Q8N8D9 126 aa1.27□□□□□ -2.21
LSM5-209ENST00000468872 TCRBV3S1A0A5B6 114 aa1.26□□□□□ -2.21
LSM5-209ENST00000468872 RBM3P98179 157 aaKnown RBP1.26□□□□□ -2.21
LSM5-209ENST00000468872 XAF1Q6GPH4 301 aa1.26□□□□□ -2.21
LSM5-209ENST00000468872 TSLPQ969D9 159 aa1.26□□□□□ -2.21
LSM5-209ENST00000468872 LINC00208Q96KT6 92 aa1.26□□□□□ -2.21
LSM5-209ENST00000468872 PROK2Q9HC23 129 aa1.26□□□□□ -2.21
LSM5-209ENST00000468872 UBE2D1P51668 147 aa1.25□□□□□ -2.21
LSM5-209ENST00000468872 KRTAP19-2Q3LHN2 52 aa1.25□□□□□ -2.21
LSM5-209ENST00000468872 SPTSSBQ8NFR3 76 aa1.25□□□□□ -2.21
LSM5-209ENST00000468872 TRAV30A0A087WSZ9 112 aa1.24□□□□□ -2.21
LSM5-209ENST00000468872 UQCRHLA0A096LP55 91 aa1.24□□□□□ -2.21
LSM5-209ENST00000468872 TRBV10-3A0A0K0K1G6 114 aa1.24□□□□□ -2.21
LSM5-209ENST00000468872 TEX49A0A1B0GTD5 131 aa1.24□□□□□ -2.21
LSM5-209ENST00000468872 LCN9Q8WX39 176 aa1.24□□□□□ -2.21
LSM5-209ENST00000468872 DYNLRB1Q9NP97 96 aa1.24□□□□□ -2.21
LSM5-209ENST00000468872 SNRNP200O75643 2136 aaKnown RBP1.24□□□□□ -2.21
LSM5-209ENST00000468872 A0A087WTM6 91 aa1.23□□□□□ -2.21
LSM5-209ENST00000468872 HCG22E2RYF7 251 aa1.23□□□□□ -2.21
LSM5-209ENST00000468872 IFITM1P13164 125 aa1.23□□□□□ -2.21
LSM5-209ENST00000468872 CCL8P80075 99 aa1.23□□□□□ -2.21
LSM5-209ENST00000468872 RPL7L1Q6DKI1 246 aaKnown RBP1.23□□□□□ -2.21
LSM5-209ENST00000468872 C5orf38Q86SI9 138 aa1.23□□□□□ -2.21
LSM5-209ENST00000468872 SPANXDQ9BXN6 97 aa1.23□□□□□ -2.21
LSM5-209ENST00000468872 A0A0D9SFI3 127 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 TMEM218A2RU14 115 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 M0R2T5 61 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 SPINK8P0C7L1 97 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 CCL3L1P16619 93 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 MT4P47944 62 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 DEFB136Q30KP8 78 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 CYP2G1PQ6ZSU1 146 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 GTF2H5Q6ZYL4 71 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 UBE2DNLQ8IWF7 75 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 C8orf59Q8N0T1 100 aaPredicted RBP1.22□□□□□ -2.21
LSM5-209ENST00000468872 DPH3P1Q9H4G8 78 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 LINC00474Q9P2X8 69 aa1.22□□□□□ -2.21
LSM5-209ENST00000468872 H3BUX3 64 aa1.21□□□□□ -2.22
LSM5-209ENST00000468872 IFNA17P01571 189 aa1.21□□□□□ -2.22
LSM5-209ENST00000468872 S100A8P05109 93 aa1.21□□□□□ -2.22
LSM5-209ENST00000468872 ELOF1P60002 83 aaKnown RBP1.21□□□□□ -2.22
LSM5-209ENST00000468872 Q6ZQY7 126 aa1.21□□□□□ -2.22
LSM5-209ENST00000468872 ZNF818PQ6ZRF7 136 aa1.21□□□□□ -2.22
LSM5-209ENST00000468872 C20orf197Q8N268 126 aa1.21□□□□□ -2.22
LSM5-209ENST00000468872 ACBD7Q8N6N7 88 aa1.21□□□□□ -2.22
LSM5-209ENST00000468872 TRAV13-2A0A0B4J235 113 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 A6NIN4 97 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 NCR3O14931 201 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 SIX6O95475 246 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 MPC2O95563 127 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 PRB3Q04118 309 aaPredicted RBP1.2□□□□□ -2.22
LSM5-209ENST00000468872 ZNF56Q15929 161 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 COMMD6Q7Z4G1 85 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 SVBPQ8N300 66 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 TTC9CQ8N5M4 171 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 LINC01600Q96MT4 127 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 LINC00312Q9Y6C7 94 aa1.2□□□□□ -2.22
LSM5-209ENST00000468872 RBAKDNA6NC62 111 aa1.19□□□□□ -2.22
LSM5-209ENST00000468872 CAV3P56539 151 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms