RNA–Protein interactions for RNA: ENST00000468654.1

SHANK1-206, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 668 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-206ENST00000468654 ADAMTSL4-AS1Q5T5F5 129 aa11.88□□□□□ -0.51
SHANK1-206ENST00000468654 SSBP3-AS1Q7Z2R9 100 aa11.88□□□□□ -0.51
SHANK1-206ENST00000468654 NPC2P61916 151 aa11.87□□□□□ -0.51
SHANK1-206ENST00000468654 SLC7A5P1Q8MH63 180 aa11.87□□□□□ -0.51
SHANK1-206ENST00000468654 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
SHANK1-206ENST00000468654 ZNF73O43830 326 aaPredicted RBP11.85□□□□□ -0.51
SHANK1-206ENST00000468654 Q8N377 158 aa11.84□□□□□ -0.51
SHANK1-206ENST00000468654 SYS1-DBNDD2H3BUS1 97 aa11.82□□□□□ -0.52
SHANK1-206ENST00000468654 LITAFQ99732 161 aa11.82□□□□□ -0.52
SHANK1-206ENST00000468654 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
SHANK1-206ENST00000468654 CBY1Q9Y3M2 126 aa11.8□□□□□ -0.52
SHANK1-206ENST00000468654 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
SHANK1-206ENST00000468654 SPANXCQ9NY87 97 aa11.79□□□□□ -0.52
SHANK1-206ENST00000468654 C5orf52A6NGY3 159 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 SLC25A20O43772 301 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BKO60814 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 TIMM17BO60830 172 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BJP06899 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BOP23527 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BBP33778 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BDP58876 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BCP62807 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST2H2BEQ16778 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.78□□□□□ -0.52
SHANK1-206ENST00000468654 C9orf153Q5TBE3 101 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 LINC01545Q5VT33 79 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 ST20-AS1Q8NBB2 130 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BHQ93079 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BNQ99877 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 HIST1H2BMQ99879 126 aa11.78□□□□□ -0.52
SHANK1-206ENST00000468654 KRTAP9-6A0A140TA67 174 aa11.77□□□□□ -0.53
SHANK1-206ENST00000468654 HINT1P49773 126 aaPredicted RBP11.76□□□□□ -0.53
SHANK1-206ENST00000468654 PET117Q6UWS5 81 aa11.74□□□□□ -0.53
SHANK1-206ENST00000468654 OR13C6PQ8NH95 151 aa11.73□□□□□ -0.53
SHANK1-206ENST00000468654 ZNF815PA8K554 130 aa11.72□□□□□ -0.53
SHANK1-206ENST00000468654 SPRR1BP22528 89 aa11.72□□□□□ -0.53
SHANK1-206ENST00000468654 SEC61BP60468 96 aaKnown RBP11.72□□□□□ -0.53
SHANK1-206ENST00000468654 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
SHANK1-206ENST00000468654 KRTAP4-1Q9BYQ7 146 aa11.72□□□□□ -0.53
SHANK1-206ENST00000468654 DHRS4-AS1Q9P1J3 65 aa11.71□□□□□ -0.53
SHANK1-206ENST00000468654 TTTY13Q9BZ97 58 aa11.7□□□□□ -0.54
SHANK1-206ENST00000468654 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
SHANK1-206ENST00000468654 XP32Q5T750 250 aa11.68□□□□□ -0.54
SHANK1-206ENST00000468654 ELOF1P60002 83 aaKnown RBP11.67□□□□□ -0.54
SHANK1-206ENST00000468654 SLC25A34Q6PIV7 304 aa11.67□□□□□ -0.54
SHANK1-206ENST00000468654 LINC00518Q8N0U6 118 aa11.66□□□□□ -0.54
SHANK1-206ENST00000468654 COX7BP24311 80 aa11.64□□□□□ -0.55
SHANK1-206ENST00000468654 C6orf99Q4VX62 202 aa11.64□□□□□ -0.55
SHANK1-206ENST00000468654 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
SHANK1-206ENST00000468654 LIMD2Q9BT23 127 aa11.63□□□□□ -0.55
SHANK1-206ENST00000468654 LAMTOR3Q9UHA4 124 aa11.63□□□□□ -0.55
SHANK1-206ENST00000468654 KRTDAPP60985 99 aa11.61□□□□□ -0.55
SHANK1-206ENST00000468654 TRBV7-6A0A0J9YX20 115 aa11.59□□□□□ -0.55
SHANK1-206ENST00000468654 HRCT1Q6UXD1 115 aa11.59□□□□□ -0.55
SHANK1-206ENST00000468654 SCGB1D4Q6XE38 83 aa11.59□□□□□ -0.55
SHANK1-206ENST00000468654 LINC01547P58512 204 aaPredicted RBP11.58□□□□□ -0.56
SHANK1-206ENST00000468654 ANKRD39Q53RE8 183 aa11.57□□□□□ -0.56
SHANK1-206ENST00000468654 COPS9Q8WXC6 57 aa11.57□□□□□ -0.56
SHANK1-206ENST00000468654 C20orf202A1L168 122 aa11.56□□□□□ -0.56
SHANK1-206ENST00000468654 IFITM1P13164 125 aa11.56□□□□□ -0.56
SHANK1-206ENST00000468654 TAL2Q16559 108 aa11.56□□□□□ -0.56
SHANK1-206ENST00000468654 Q1RN00 199 aa11.56□□□□□ -0.56
SHANK1-206ENST00000468654 CD164Q04900 197 aa11.55□□□□□ -0.56
SHANK1-206ENST00000468654 TEX49A0A1B0GTD5 131 aa11.54□□□□□ -0.56
SHANK1-206ENST00000468654 A0A1B0GWB2 263 aa11.54□□□□□ -0.56
SHANK1-206ENST00000468654 S100A1P23297 94 aa11.54□□□□□ -0.56
SHANK1-206ENST00000468654 DEFB105AQ8NG35 78 aa11.54□□□□□ -0.56
SHANK1-206ENST00000468654 Q6ZVH6 145 aa11.53□□□□□ -0.56
SHANK1-206ENST00000468654 PRO1933Q9H354 126 aa11.53□□□□□ -0.56
SHANK1-206ENST00000468654 IGLV5-48A0A075B6I7 105 aa11.51□□□□□ -0.57
SHANK1-206ENST00000468654 SMIM29Q86T20 159 aa11.51□□□□□ -0.57
SHANK1-206ENST00000468654 ATOH7Q8N100 152 aa11.51□□□□□ -0.57
SHANK1-206ENST00000468654 A6NDN8 102 aa11.5□□□□□ -0.57
SHANK1-206ENST00000468654 PCP2Q8IVA1 136 aa11.5□□□□□ -0.57
SHANK1-206ENST00000468654 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
SHANK1-206ENST00000468654 MUSTN1Q8IVN3 82 aa11.49□□□□□ -0.57
SHANK1-206ENST00000468654 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
SHANK1-206ENST00000468654 H7C2G1 150 aa11.48□□□□□ -0.57
SHANK1-206ENST00000468654 AKR1D1P51857 326 aa11.48□□□□□ -0.57
SHANK1-206ENST00000468654 Q5XG85 94 aa11.48□□□□□ -0.57
SHANK1-206ENST00000468654 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
SHANK1-206ENST00000468654 A4D1N5 150 aa11.46□□□□□ -0.57
SHANK1-206ENST00000468654 TRAV13-2A0A0B4J235 113 aa11.44□□□□□ -0.58
SHANK1-206ENST00000468654 KRTAP19-2Q3LHN2 52 aa11.44□□□□□ -0.58
SHANK1-206ENST00000468654 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
SHANK1-206ENST00000468654 FSIP2Q5CZC0 6907 aa11.43□□□□□ -0.58
SHANK1-206ENST00000468654 SMIM11BQ8TCY0 68 aa11.43□□□□□ -0.58
SHANK1-206ENST00000468654 NHP2Q9NX24 153 aaKnown RBP11.43□□□□□ -0.58
SHANK1-206ENST00000468654 SNRPEP62304 92 aaKnown RBP11.41□□□□□ -0.58
SHANK1-206ENST00000468654 A0A0G2JQZ4 141 aa11.4□□□□□ -0.58
SHANK1-206ENST00000468654 C1orf195Q5TG92 126 aa11.4□□□□□ -0.58
SHANK1-206ENST00000468654 IGLV8-61A0A075B6I0 122 aa11.39□□□□□ -0.59
SHANK1-206ENST00000468654 MT1HP80294 61 aa11.35□□□□□ -0.59
SHANK1-206ENST00000468654 HIST3H2BBQ8N257 126 aa11.34□□□□□ -0.59
SHANK1-206ENST00000468654 CRCT1Q9UGL9 99 aa11.34□□□□□ -0.59
SHANK1-206ENST00000468654 LINC00575Q6W349 94 aa11.32□□□□□ -0.6
SHANK1-206ENST00000468654 HIST1H2BLQ99880 126 aa11.32□□□□□ -0.6
SHANK1-206ENST00000468654 VAMP3Q15836 100 aa11.31□□□□□ -0.6
SHANK1-206ENST00000468654 F8WEM9 126 aa11.3□□□□□ -0.6
SHANK1-206ENST00000468654 HSBP1L1C9JCN9 74 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms