RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 KRTAP10-4P60372 401 aaPredicted RBP3.1□□□□□ -1.91
U2AF1-207ENST00000468039 CKS1BP61024 79 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 RPL37AP61513 92 aaKnown RBP3.1□□□□□ -1.91
U2AF1-207ENST00000468039 COA6Q5JTJ3 125 aaKnown RBP3.1□□□□□ -1.91
U2AF1-207ENST00000468039 TMEM170BQ5T4T1 132 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 Q8IZM0 81 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 COX7B2Q8TF08 81 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 IFI27L1Q96BM0 104 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 PLAC8Q9NZF1 115 aa3.1□□□□□ -1.91
U2AF1-207ENST00000468039 A0A0J9YXY3 114 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 TRBV30A0A0K0K1B3 111 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 F8VRH5 84 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 H3BRM9 83 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
U2AF1-207ENST00000468039 LCE3AQ5TA76 89 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 PHF5AQ7RTV0 110 aaKnown RBP3.09□□□□□ -1.91
U2AF1-207ENST00000468039 FAM19A5Q7Z5A7 132 aaPredicted RBP3.09□□□□□ -1.91
U2AF1-207ENST00000468039 PMCHL2Q9BQD1 86 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 XAGE1AQ9HD64 81 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 SPANXB1Q9NS25 103 aaPredicted RBP3.09□□□□□ -1.91
U2AF1-207ENST00000468039 PKIGQ9Y2B9 76 aa3.09□□□□□ -1.91
U2AF1-207ENST00000468039 TRAV12-1A0A0B4J245 112 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 NDUFC2-KCTD14E9PQ53 114 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 TLX1NBP0CAT3 122 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 S100A1P23297 94 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 Q1RN00 199 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 ZNF625Q96I27 306 aaPredicted RBP3.08□□□□□ -1.92
U2AF1-207ENST00000468039 LINC00474Q9P2X8 69 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 HSPB8Q9UJY1 196 aa3.08□□□□□ -1.92
U2AF1-207ENST00000468039 TMEM223A0PJW6 202 aa3.07□□□□□ -1.92
U2AF1-207ENST00000468039 CXCL5P42830 114 aa3.07□□□□□ -1.92
U2AF1-207ENST00000468039 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
U2AF1-207ENST00000468039 KRTAP11-1Q8IUC1 163 aa3.07□□□□□ -1.92
U2AF1-207ENST00000468039 PSPHP1O15172 72 aa3.06□□□□□ -1.92
U2AF1-207ENST00000468039 DPM2O94777 84 aa3.06□□□□□ -1.92
U2AF1-207ENST00000468039 TSPEAR-AS2P59090 65 aa3.06□□□□□ -1.92
U2AF1-207ENST00000468039 FLG2Q5D862 2391 aaPredicted RBP3.06□□□□□ -1.92
U2AF1-207ENST00000468039 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
U2AF1-207ENST00000468039 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
U2AF1-207ENST00000468039 SYS1-DBNDD2H3BUS1 97 aa3.05□□□□□ -1.92
U2AF1-207ENST00000468039 IGKCP01834 107 aa3.05□□□□□ -1.92
U2AF1-207ENST00000468039 KRTDAPP60985 99 aa3.05□□□□□ -1.92
U2AF1-207ENST00000468039 HERVK_113P61574 105 aa3.05□□□□□ -1.92
U2AF1-207ENST00000468039 PSORS1C2Q9UIG4 136 aa3.05□□□□□ -1.92
U2AF1-207ENST00000468039 ERG28Q9UKR5 140 aa3.05□□□□□ -1.92
U2AF1-207ENST00000468039 C3orf79P0CE67 100 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 SMIM13P0DJ93 91 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 PLNP26678 52 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 UBE2BP63146 152 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 MEIG1Q5JSS6 88 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 C1orf137Q5JT78 98 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 Q8NDZ9 215 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 SND1-IT1Q9HBX3 110 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
U2AF1-207ENST00000468039 J3QQQ9 107 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 LEPROTO15243 131 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 NDUFS5O43920 106 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 LINC00158P58513 81 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 C6orf99Q4VX62 202 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 LINC01545Q5VT33 79 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 ATOH7Q8N100 152 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 NDUFA12Q9UI09 145 aa3.03□□□□□ -1.92
U2AF1-207ENST00000468039 IGHV6-1A0A0B4J1U7 121 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 A8MU10 97 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 LGALS3P17931 250 aaKnown RBP3.02□□□□□ -1.93
U2AF1-207ENST00000468039 CEND1Q8N111 149 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 HIST3H2BBQ8N257 126 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 MIR7-3HGQ8N6C7 128 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 LINC00337Q8N6G1 96 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 DAND5Q8N907 189 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 HIST1H2BLQ99880 126 aa3.02□□□□□ -1.93
U2AF1-207ENST00000468039 IGKV2-28A0A075B6P5 120 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 IGKV2D-26A0A0A0MRZ7 120 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 MYMXA0A1B0GTQ4 84 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 NCR3O14931 201 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 IGKV2D-28P01615 120 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 IGLV7-43P04211 117 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 NPC2P61916 151 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 COX17Q14061 63 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 SFTA2Q6UW10 78 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 CAMK2N1Q7Z7J9 78 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 TTTY13Q9BZ97 58 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
U2AF1-207ENST00000468039 C20orf202A1L168 122 aa3□□□□□ -1.93
U2AF1-207ENST00000468039 TMEM238C9JI98 176 aa3□□□□□ -1.93
U2AF1-207ENST00000468039 S100A2P29034 98 aa3□□□□□ -1.93
U2AF1-207ENST00000468039 NMUP48645 174 aa3□□□□□ -1.93
U2AF1-207ENST00000468039 PSMB2P49721 201 aa3□□□□□ -1.93
U2AF1-207ENST00000468039 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
U2AF1-207ENST00000468039 TP73-AS1Q9UF72 201 aa3□□□□□ -1.93
U2AF1-207ENST00000468039 DMBT1Q9UGM3 2413 aaPredicted RBP2.99□□□□□ -1.93
U2AF1-207ENST00000468039 ZNF815PA8K554 130 aa2.99□□□□□ -1.93
U2AF1-207ENST00000468039 C8orf87E5RJ46 101 aa2.99□□□□□ -1.93
U2AF1-207ENST00000468039 MT1HL1P0DM35 61 aa2.99□□□□□ -1.93
U2AF1-207ENST00000468039 SOSTDC1Q6X4U4 206 aa2.99□□□□□ -1.93
U2AF1-207ENST00000468039 IGLV1-50A0A075B6I6 118 aa2.98□□□□□ -1.93
U2AF1-207ENST00000468039 ZNF861PO60384 105 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms