RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
PRPF38B-204ENST00000467302 MDFIQ99750 246 aa9.7□□□□□ -0.86
PRPF38B-204ENST00000467302 NBEAL1Q6ZS30 2694 aa9.7□□□□□ -0.86
PRPF38B-204ENST00000467302 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
PRPF38B-204ENST00000467302 HUWE1Q7Z6Z7 4374 aaKnown RBP9.69□□□□□ -0.86
PRPF38B-204ENST00000467302 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
PRPF38B-204ENST00000467302 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
PRPF38B-204ENST00000467302 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
PRPF38B-204ENST00000467302 C20orf197Q8N268 126 aa9.67□□□□□ -0.86
PRPF38B-204ENST00000467302 OXTP01178 125 aa9.66□□□□□ -0.86
PRPF38B-204ENST00000467302 Q6ZRP5 223 aa9.66□□□□□ -0.86
PRPF38B-204ENST00000467302 MGAM2Q2M2H8 2515 aa9.64□□□□□ -0.87
PRPF38B-204ENST00000467302 F8WDY8 70 aa9.63□□□□□ -0.87
PRPF38B-204ENST00000467302 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
PRPF38B-204ENST00000467302 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
PRPF38B-204ENST00000467302 H7BZZ5 65 aa9.61□□□□□ -0.87
PRPF38B-204ENST00000467302 KLKP1Q107X0 134 aa9.61□□□□□ -0.87
PRPF38B-204ENST00000467302 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
PRPF38B-204ENST00000467302 SCXQ7RTU7 201 aa9.6□□□□□ -0.87
PRPF38B-204ENST00000467302 KCNQ1DNQ9H478 68 aa9.6□□□□□ -0.87
PRPF38B-204ENST00000467302 LINC00588Q9Y4M8 146 aa9.6□□□□□ -0.87
PRPF38B-204ENST00000467302 SYCNQ0VAF6 134 aa9.6□□□□□ -0.87
PRPF38B-204ENST00000467302 C5orf47Q569G3 176 aa9.59□□□□□ -0.87
PRPF38B-204ENST00000467302 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
PRPF38B-204ENST00000467302 SERTAD4-AS1Q5TG53 156 aa9.57□□□□□ -0.88
PRPF38B-204ENST00000467302 FAM236DA0A1B0GTK5 79 aa9.56□□□□□ -0.88
PRPF38B-204ENST00000467302 FAM236CP0DP71 79 aa9.56□□□□□ -0.88
PRPF38B-204ENST00000467302 DNAH9Q9NYC9 4486 aa9.56□□□□□ -0.88
PRPF38B-204ENST00000467302 C7orf33Q8WU49 177 aa9.56□□□□□ -0.88
PRPF38B-204ENST00000467302 Q8N377 158 aa9.55□□□□□ -0.88
PRPF38B-204ENST00000467302 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
PRPF38B-204ENST00000467302 EPM2AB3EWF7 344 aa9.54□□□□□ -0.88
PRPF38B-204ENST00000467302 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
PRPF38B-204ENST00000467302 IGLV5-48A0A075B6I7 105 aa9.53□□□□□ -0.88
PRPF38B-204ENST00000467302 SNURFQ9Y675 71 aa9.53□□□□□ -0.88
PRPF38B-204ENST00000467302 Q5XG85 94 aa9.53□□□□□ -0.88
PRPF38B-204ENST00000467302 RMI2Q96E14 147 aa9.53□□□□□ -0.88
PRPF38B-204ENST00000467302 PLA2G2DQ9UNK4 145 aa9.53□□□□□ -0.88
PRPF38B-204ENST00000467302 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
PRPF38B-204ENST00000467302 BPY2O14599 106 aa9.51□□□□□ -0.89
PRPF38B-204ENST00000467302 NREPQ16612 68 aa9.51□□□□□ -0.89
PRPF38B-204ENST00000467302 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
PRPF38B-204ENST00000467302 Q8N9L7 120 aa9.51□□□□□ -0.89
PRPF38B-204ENST00000467302 DEFB105AQ8NG35 78 aa9.5□□□□□ -0.89
PRPF38B-204ENST00000467302 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
PRPF38B-204ENST00000467302 Q6ZRX8 168 aa9.49□□□□□ -0.89
PRPF38B-204ENST00000467302 DHRS4-AS1Q9P1J3 65 aa9.49□□□□□ -0.89
PRPF38B-204ENST00000467302 SERP1Q9Y6X1 66 aa9.49□□□□□ -0.89
PRPF38B-204ENST00000467302 DNAH1Q9P2D7 4330 aa9.49□□□□□ -0.89
PRPF38B-204ENST00000467302 Q9BRP9 147 aa9.49□□□□□ -0.89
PRPF38B-204ENST00000467302 DYNC2H1Q8NCM8 4307 aaKnown RBP9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 F8WEM9 126 aa9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 C3orf84H3BNL1 204 aa9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 ERC2-IT1O76042 136 aa9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 SPRR1AP35321 89 aa9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 IGLV1-50A0A075B6I6 118 aa9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 NDUFC1O43677 76 aa9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 C4orf26Q17RF5 130 aa9.48□□□□□ -0.89
PRPF38B-204ENST00000467302 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
PRPF38B-204ENST00000467302 PRYO14603 147 aa9.47□□□□□ -0.89
PRPF38B-204ENST00000467302 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.89
PRPF38B-204ENST00000467302 TNP2Q05952 138 aa9.46□□□□□ -0.89
PRPF38B-204ENST00000467302 KRTAP7-1Q8IUC3 87 aa9.46□□□□□ -0.89
PRPF38B-204ENST00000467302 STAB2Q8WWQ8 2551 aa9.46□□□□□ -0.89
PRPF38B-204ENST00000467302 A0A1B0GW54 56 aa9.46□□□□□ -0.9
PRPF38B-204ENST00000467302 CASC10Q5T4H9 136 aa9.46□□□□□ -0.9
PRPF38B-204ENST00000467302 OCR1Q9BZK8 76 aa9.46□□□□□ -0.9
PRPF38B-204ENST00000467302 TMEM254Q8TBM7 123 aa9.45□□□□□ -0.9
PRPF38B-204ENST00000467302 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
PRPF38B-204ENST00000467302 A0A1W2PNM2 257 aa9.44□□□□□ -0.9
PRPF38B-204ENST00000467302 APLNQ9ULZ1 77 aa9.44□□□□□ -0.9
PRPF38B-204ENST00000467302 FUSP35637 526 aaKnown RBP eCLIP9.43□□□□□ -0.9
PRPF38B-204ENST00000467302 UBE2DNLQ8IWF7 75 aa9.43□□□□□ -0.9
PRPF38B-204ENST00000467302 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
PRPF38B-204ENST00000467302 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
PRPF38B-204ENST00000467302 NUPR2A6NF83 97 aa9.41□□□□□ -0.9
PRPF38B-204ENST00000467302 C1orf137Q5JT78 98 aa9.41□□□□□ -0.9
PRPF38B-204ENST00000467302 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
PRPF38B-204ENST00000467302 Q8NBF4 154 aa9.4□□□□□ -0.9
PRPF38B-204ENST00000467302 A0A0U1RQV1 116 aa9.39□□□□□ -0.91
PRPF38B-204ENST00000467302 ATP5EP56381 51 aaPredicted RBP9.39□□□□□ -0.91
PRPF38B-204ENST00000467302 MRPL55Q7Z7F7 128 aaKnown RBP9.39□□□□□ -0.91
PRPF38B-204ENST00000467302 SPRR4Q96PI1 79 aa9.39□□□□□ -0.91
PRPF38B-204ENST00000467302 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
PRPF38B-204ENST00000467302 DNAH7Q8WXX0 4024 aa9.35□□□□□ -0.91
PRPF38B-204ENST00000467302 LYSTQ99698 3801 aa9.35□□□□□ -0.91
PRPF38B-204ENST00000467302 PRKDCP78527 4128 aaKnown RBP9.34□□□□□ -0.91
PRPF38B-204ENST00000467302 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
PRPF38B-204ENST00000467302 FP248Q71RG6 208 aaPredicted RBP9.34□□□□□ -0.91
PRPF38B-204ENST00000467302 SMIM29Q86T20 159 aa9.34□□□□□ -0.91
PRPF38B-204ENST00000467302 PSCAO43653 123 aa9.33□□□□□ -0.92
PRPF38B-204ENST00000467302 UBE2BP63146 152 aa9.33□□□□□ -0.92
PRPF38B-204ENST00000467302 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
PRPF38B-204ENST00000467302 DNHD1Q96M86 4753 aa9.33□□□□□ -0.92
PRPF38B-204ENST00000467302 LCE6AA0A183 80 aa9.32□□□□□ -0.92
PRPF38B-204ENST00000467302 DSCR10P59022 87 aa9.32□□□□□ -0.92
PRPF38B-204ENST00000467302 PLECQ15149 4684 aaKnown RBP9.32□□□□□ -0.92
PRPF38B-204ENST00000467302 CSMD3Q7Z407 3707 aa9.32□□□□□ -0.92
PRPF38B-204ENST00000467302 HIGD2AQ9BW72 106 aa9.31□□□□□ -0.92
PRPF38B-204ENST00000467302 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 362.9 ms