RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 DIRC1Q969H9 104 aa3.27□□□□□ -1.89
PTCD3-207ENST00000467273 NPCDR1Q9BY65 106 aa3.27□□□□□ -1.89
PTCD3-207ENST00000467273 A0A087WXM4 84 aa3.26□□□□□ -1.89
PTCD3-207ENST00000467273 GRIFINA4D1Z8 144 aa3.26□□□□□ -1.89
PTCD3-207ENST00000467273 COX7CP15954 63 aa3.26□□□□□ -1.89
PTCD3-207ENST00000467273 NPC2P61916 151 aa3.26□□□□□ -1.89
PTCD3-207ENST00000467273 MRPS36P82909 103 aaKnown RBP3.26□□□□□ -1.89
PTCD3-207ENST00000467273 LGALSLQ3ZCW2 172 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-207ENST00000467273 ORMDL3Q8N138 153 aa3.26□□□□□ -1.89
PTCD3-207ENST00000467273 LINC00269Q8N2A0 174 aa3.26□□□□□ -1.89
PTCD3-207ENST00000467273 CMTM2Q8TAZ6 248 aa3.26□□□□□ -1.89
PTCD3-207ENST00000467273 TRAV1-1A0A0B4J248 108 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 IGKV3D-20A0A0C4DH25 116 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 IGKV2-24A0A0C4DH68 120 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 A0A0J9YXY3 114 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 UBE2L5PA0A1B0GUS4 154 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 HINT1P49773 126 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-207ENST00000467273 UBE2L3P68036 154 aaKnown RBP3.25□□□□□ -1.89
PTCD3-207ENST00000467273 TVP23CQ96ET8 276 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 CAMK2N2Q96S95 79 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 DSCR8Q96T75 97 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 NMES1Q9C002 83 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 ST20Q9HBF5 79 aa3.25□□□□□ -1.89
PTCD3-207ENST00000467273 H3BRM9 83 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 LEPROTO15243 131 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 IGLC3P0DOY3 106 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 UBE2AP49459 152 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 HIST1H4AP62805 103 aaKnown RBP3.24□□□□□ -1.89
PTCD3-207ENST00000467273 ADIRFQ15847 76 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 FAM104BQ5XKR9 115 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 FP248Q71RG6 208 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-207ENST00000467273 MIR17HGQ75NE6 70 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 OSTCQ9NRP0 149 aa3.24□□□□□ -1.89
PTCD3-207ENST00000467273 FSIP2Q5CZC0 6907 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 TRBV25-1A0A075B6N4 114 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 A0A096LNI7 61 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 GVQW2A0A096LPI5 108 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-207ENST00000467273 TCL1BO95988 128 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 SEC11AP67812 179 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 FAM74A4Q5TZK3 123 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 C15orf56Q8N910 161 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 C20orf78Q9BR46 151 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 XAGE1AQ9HD64 81 aa3.23□□□□□ -1.89
PTCD3-207ENST00000467273 ADCYAP1P18509 176 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 UBE2D1P51668 147 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 TPRXLQ17RH7 258 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 CLPSL2Q6UWE3 100 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 TOMM5Q8N4H5 51 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 IMMP2LQ96T52 175 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 PMCHL2Q9BQD1 86 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 C11orf1Q9H5F2 150 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 C8orf17Q9NRJ1 99 aa3.22□□□□□ -1.89
PTCD3-207ENST00000467273 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 A8MWL6 223 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 C17orf112F2Z3M2 114 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 TSPEAR-AS2P59090 65 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 SS18Q15532 418 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 MRPL51Q4U2R6 128 aaKnown RBP3.21□□□□□ -1.9
PTCD3-207ENST00000467273 HIGD2BQ4VC39 106 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 SOSTDC1Q6X4U4 206 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 NTM-AS1Q6ZSK4 140 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 TSKUQ8WUA8 353 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 PHLDA3Q9Y5J5 127 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 SPCS1Q9Y6A9 102 aa3.21□□□□□ -1.9
PTCD3-207ENST00000467273 IGHV1-24A0A0C4DH33 117 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 TRBV7-7A0A0K0K1E9 115 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 H3BVH4 76 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 SERF1AO75920 110 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 IGLV7-43P04211 117 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 KRTAP1-4P0C5Y4 121 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 ARMS2P0C7Q2 107 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 RNASE13Q5GAN3 156 aaKnown RBP3.2□□□□□ -1.9
PTCD3-207ENST00000467273 C1orf137Q5JT78 98 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 BVES-AS1Q5T3Y7 98 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 C20orf203Q8NBC4 194 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 OR10AG1Q8NH19 301 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
PTCD3-207ENST00000467273 A0A1W2PPM0 123 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 NAP1L6A6NFF2 107 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 TIMM17BO60830 172 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 IGKCP01834 107 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 ATP5EP56381 51 aaPredicted RBP3.19□□□□□ -1.9
PTCD3-207ENST00000467273 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 TYMSOSQ8TAI1 123 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 PPDPFLQ8WWR9 84 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 SCGB3A1Q96QR1 104 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 TTTY13Q9BZ97 58 aa3.19□□□□□ -1.9
PTCD3-207ENST00000467273 A6NN06 94 aa3.18□□□□□ -1.9
PTCD3-207ENST00000467273 ZNF56Q15929 161 aa3.18□□□□□ -1.9
PTCD3-207ENST00000467273 Q1RN00 199 aa3.18□□□□□ -1.9
PTCD3-207ENST00000467273 ATP11AUNQ6ZP68 121 aa3.18□□□□□ -1.9
PTCD3-207ENST00000467273 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
PTCD3-207ENST00000467273 AMN1Q8IY45 258 aa3.18□□□□□ -1.9
PTCD3-207ENST00000467273 IGLV4-60A0A075B6I1 120 aa3.17□□□□□ -1.9
PTCD3-207ENST00000467273 K7ERS5 55 aa3.17□□□□□ -1.9
PTCD3-207ENST00000467273 ATOX1O00244 68 aa3.17□□□□□ -1.9
PTCD3-207ENST00000467273 SIX6O95475 246 aa3.17□□□□□ -1.9
PTCD3-207ENST00000467273 SPATA45Q537H7 98 aa3.17□□□□□ -1.9
PTCD3-207ENST00000467273 PYDC2Q56P42 97 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms